Difference between revisions of "Os06g0498400"
(Created page with "{{JaponicaGene|
GeneName = Os06g0498400|
Description = Similar to Alpha-glucan water dikinase, chloroplast precursor (EC 2.7.9.4) (Starch-related R1 protein)|
Version = NM_...") |
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| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{JaponicaGene| | {{JaponicaGene| | ||
GeneName = Os06g0498400| | GeneName = Os06g0498400| | ||
Revision as of 20:23, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os06g0498400 |
|---|---|
| Description |
Similar to Alpha-glucan water dikinase, chloroplast precursor (EC 2.7.9.4) (Starch-related R1 protein) |
| Version |
NM_001064234.1 GI:115468199 GeneID:4341105 |
| Length |
10934 bp |
| Definition |
Oryza sativa Japonica Group Os06g0498400, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 6:18366519..18377452 |
| Sequence Coding Region |
18366520..18366609,18366695..18366736,18366853..18366962,18367104..18367182,18367261..18367352 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008399:18366519..18377452 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008399:18366519..18377452 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>cccgcggccaccaccaccctcgccgtctcccgtcggagcctcctcgcccctcgcgccatcgccgcttccaccggccgcgcctccccgggccttgtcggaaggttcaccctggatgccaactccgagcttaaggtgacattgaacccagcaccgcagggttcggtggtggagatcaatctagaggcaactaacaccagcggctccctgatactgcattggggcgcccttcgcccggatagaggagaatggctcctaccatcccggaaaccagatggcacgacagtgtacaagaacagggctcttaggacgccttttataaagtcaggtgataactccacgctgaaaattgagatagatgatcctgcagtgcaagccattgagttcctcatatttgatgaggcacggaataattggtacaaaaacaatggccagaatttccaaattcagctacaagcgagccaatatcaagggcagggtacatctactgctacttcttctactgtggttccagaggatcttgtgcagatacaatcatatcttcggtgggaaagaaagggaaagcagtcatatacacctgagcaagagaaggaggagtatgaagcagcacgaactgagttgatagaggaattaaacaagggtgtttctttggagaagctacgagcgaaactgacaaagacacctgaggcaactgatagtaatgctcctgcatctgaaagcactgtgactactaaagtcccagaggaacttgtacaagtccaggcttacataaggtgggagaaagcaggcaagccaaattatgccccagagaagcaattggtcgagtttgaggaagcaaggaaggaactgcagtctgagttggataaggggacctcagttgagcagttgaggaacaaaattttgaaagggaacattgagacaaaagtttccaagcagctgaaggacaaaaaatacttttctgtggaaagaattcagcggaaaaaacgagatattgtgcaactacttaaaaaacacaagcctactgttatggaagcgcaagtagagactcctaaacaacccactgttctggatctcttcacaaagtcattacaggagcaggataactgtgaggttctaagcagaaagcttttcaagttcggtgacaaggagatactgggaattaccaccgttgctctaggaaaaaccaaagttcacttggcaacaaactatatggagccacttatacttcactgggcgttgtcaaaagagaatggagagtggcaggcacctccctcaagcatattgccatctggttcatcattgctagacaaggcatgtgaaacttcattcagtgaatatgaattgaatggtctgcattgtcaggttgttgagatcgagcttgacgatggtggatacaagcggatgccctttgttctccggtctggtgaaacatggatgaaaaataatggctctgacttttacttggatttcagcaccaaagttgcaaaaaatacaaaggatactggtgatgctggtaaaggcactgctaaggccttgcttgaaagaatagcagatctagaggaagatgcccaacgatctcttatgcacagattcaatattgcagcagatctagttgaccaagcaagagataatggattattgggtattattggaatttttgtttggattaggttcatggctacaaggcaactaatatggaacaagaactacaatgtgaagccacgtgagataagcaaagcacaagataggtttacagatgatcttgagaatatgtacagaacttacccacaatatcaggagatcttaagaatgataatgtctgctgttggtcggggaggtgaaggtgatgttggtcaacgcattcgtgatgagatattagtaatccagagaaataatgactgcaaaggtggaatgatggaggagtggcaccagaaactgcacaacaatacaagcccagatgatgtagtgatctgccaggccctacttgattatatcaagagtgattttgatattggtgtttactgggacaccttgaaaaaagatggtataacaaaagagcgtctattgagctatgatcgaccgattcattcagagccaaatttcaggagtgaacagaaagatggcttactccgtgacttgggcaattatatgagaagcctcaaggcagtgcattctggtgctgatcttgaatctgctatagcaacttgcatgggatacaaatcagagggtgaaggtttcatggttggtgttcagattaatccagtgaagggtttgccatctggatttcctaaattgcttgaatttgtacttgaccatgttgaggataaatcagcagaaccacttcttgaggggttattggaggctcgagctgaactacaccctttgctccttggctctcctgaacgcatgaaggatcttatctttttagacattgctcttgattctactttcaggacagcagttgaaagatcatatgaggagctcaataatgtagaaccagagaaaattatgtacttcatcagtcttgtccttgaaaatcttgctttatccaccgacgacaatgaagatatcctatattgcttaaagggatggaatcaagccttggaaatggctaaacagaaaaacaaccaatgggctctctatgctaaagcatttctggacagaaccagacttgcccttgcaagcaagggagaacaatactataatttgatgcagccctcagctgaatatcttggctcgttacttaacattgaccaatgggcagttaatatctttacagaagaaattattcgtggtggatcagctgctaccctgtctgctcttctgaatcggattgatcctgttcttaggaatgttgcacagcttggaagttggcaggttataagcccagttgaagtatcaggttacattgtagtggttgatgaattgcttgctgttcaaaacaaatcctatgataaaccaactatccttgtggcaaagagtgtcaagggagaggaagaaataccagatggagttgttggtgttattacacctgatatgccagatgttctctcccatgtatcagtccgagcaaggaattgcaaggttttatttgcaacatgctttgatcctaacaccttgtctgaactccaaggacatgatgggaaagtgttttccttcaaacctacttctgcagatatcacctatagggagattccagagagtgaactgcaatcaggttctctaaatgcagaagctggccaggcagtgccatctgtgtcattagtcaagaagaagtttcttggaaaatatgcaatatcagcagaagaattctctgaggaaatggttggggccaagtctcgcaacgtagcatacctcaaaggaaaagtaccctcatgggttggtgtccctacatcagttgcgattccatttgggacctttgagaaggttttgtctgatgaaatcaataaggaagtcgcgcaaaccatacaaatgctgaagggaaaacttgctcaagatgattttagtgctctaggcgaaatacggaaaactgttctcaatttaactgctcctactcaactgatcaaggaactgaaggagaagatgctaggctctggaatgccctggcctggagatgaaggtgaccaacgttgggagcaagcatggatggcaattaaaaaggtttgggcgtcaaaatggaatgaaagagcatattttagcactcgtaaggtgaagcttgatcatgactacctttccatggctgtacttgtacaagaaattgtcaatgcagactatgcctttgtcattcatactactaacccatcatcgggagattcgtctgagatatatgctgaagtggtgaaagggcttggagaaacacttgtaggagcctatcctggtcgcgccatgagctttgtatgtaagaaaaacgaccttgactctcccaaggtactgggtttcccaagcaagccaattggtctcttcataaagagatcaatcatctttcgttcagattccaacggtgaggatttagaagggtatgctggagcaggactgtatgatagtgtccctatggatgaggaagatgaagtcatactcgactacaccaccgaccccctcattacagatcagggattccaaaaatctatcctctcgagcattgcacgggctggtcatgccattgaggagctttatgggtccccacaggatgttgagggtgcagtgaaggaagggaagctatacgtagtacagacaagaccacagatgtaa</cdnaseq> |
| Protein Sequence |
<aaseq>PAATTTLAVSRRSLLAPRAIAASTGRASPGLVGRFTLDANSELK VTLNPAPQGSVVEINLEATNTSGSLILHWGALRPDRGEWLLPSRKPDGTTVYKNRALR TPFIKSGDNSTLKIEIDDPAVQAIEFLIFDEARNNWYKNNGQNFQIQLQASQYQGQGT STATSSTVVPEDLVQIQSYLRWERKGKQSYTPEQEKEEYEAARTELIEELNKGVSLEK LRAKLTKTPEATDSNAPASESTVTTKVPEELVQVQAYIRWEKAGKPNYAPEKQLVEFE EARKELQSELDKGTSVEQLRNKILKGNIETKVSKQLKDKKYFSVERIQRKKRDIVQLL KKHKPTVMEAQVETPKQPTVLDLFTKSLQEQDNCEVLSRKLFKFGDKEILGITTVALG KTKVHLATNYMEPLILHWALSKENGEWQAPPSSILPSGSSLLDKACETSFSEYELNGL HCQVVEIELDDGGYKRMPFVLRSGETWMKNNGSDFYLDFSTKVAKNTKDTGDAGKGTA KALLERIADLEEDAQRSLMHRFNIAADLVDQARDNGLLGIIGIFVWIRFMATRQLIWN KNYNVKPREISKAQDRFTDDLENMYRTYPQYQEILRMIMSAVGRGGEGDVGQRIRDEI LVIQRNNDCKGGMMEEWHQKLHNNTSPDDVVICQALLDYIKSDFDIGVYWDTLKKDGI TKERLLSYDRPIHSEPNFRSEQKDGLLRDLGNYMRSLKAVHSGADLESAIATCMGYKS EGEGFMVGVQINPVKGLPSGFPKLLEFVLDHVEDKSAEPLLEGLLEARAELHPLLLGS PERMKDLIFLDIALDSTFRTAVERSYEELNNVEPEKIMYFISLVLENLALSTDDNEDI LYCLKGWNQALEMAKQKNNQWALYAKAFLDRTRLALASKGEQYYNLMQPSAEYLGSLL NIDQWAVNIFTEEIIRGGSAATLSALLNRIDPVLRNVAQLGSWQVISPVEVSGYIVVV DELLAVQNKSYDKPTILVAKSVKGEEEIPDGVVGVITPDMPDVLSHVSVRARNCKVLF ATCFDPNTLSELQGHDGKVFSFKPTSADITYREIPESELQSGSLNAEAGQAVPSVSLV KKKFLGKYAISAEEFSEEMVGAKSRNVAYLKGKVPSWVGVPTSVAIPFGTFEKVLSDE INKEVAQTIQMLKGKLAQDDFSALGEIRKTVLNLTAPTQLIKELKEKMLGSGMPWPGD EGDQRWEQAWMAIKKVWASKWNERAYFSTRKVKLDHDYLSMAVLVQEIVNADYAFVIH TTNPSSGDSSEIYAEVVKGLGETLVGAYPGRAMSFVCKKNDLDSPKVLGFPSKPIGLF IKRSIIFRSDSNGEDLEGYAGAGLYDSVPMDEEDEVILDYTTDPLITDQGFQKSILSS IARAGHAIEELYGSPQDVEGAVKEGKLYVVQTRPQM</aaseq> |
| Gene Sequence |
<dnaseqindica>2..91#177..218#335..444#586..664#743..834#917..1089#1388..1617#1696..2031#2108..2215#2314..2412#2491..2621#3221..3316#3399..3533#3771..3933#4022..4111#4197..4382#5329..5391#5468..5530#5612..5671#5887..6039#6159..6242#7063..7239#7314..7420#7487..7700#7787..7890#8555..8690#8820..8945#9311..9421#9597..9695#9996..10262#10336..10451#10533..10737#ccccgcggccaccaccaccctcgccgtctcccgtcggagcctcctcgcccctcgcgccatcgccgcttccaccggccgcgcctccccgggcgtacgcgctttttctcgctctatcgtgcccgccacgtgttcgacggtgtgactcactctctctctatgcttctgtttgtttgcagcttgtcggaaggttcaccctggatgccaactccgagcttaaggtgctgctgatctaccatgcattttgtggggggcgggttcacctggatcgaccaatttgatgtgatttttgttcgttctaatggagcatatgctgcataaatttttgcaaacacaggtgacattgaacccagcaccgcagggttcggtggtggagatcaatctagaggcaactaacaccagcggctccctgatactgcattggggcgcccttcgcccggatagagggtgagacttatcttctgtccctgttgatgactagtgcgtgcgtgcatgcccaatatcaatatatgcttctgtgttacatgttttgtatattttcgatttaaggcttggtaatccctaacaaagctttttgactgtacttagagaatggctcctaccatcccggaaaccagatggcacgacagtgtacaagaacagggctcttaggacgccttttataaaggtcagtcttgcatgacggatctgtcttgcaatgtaagtgcacatggttagtaatttctattcctgtctcgaatttcagtcaggtgataactccacgctgaaaattgagatagatgatcctgcagtgcaagccattgagttcctcatatttgatgaggcacggaataattggtcagttctttttgggttacccatcctaccctgtttcttggaatgcagaagatatcaaataacaacactctactttggacaggtacaaaaacaatggccagaatttccaaattcagctacaagcgagccaatatcaagggcagggtacatctactgctacttcttctactgtggttccagaggatcttgtgcagatacaatcatatcttcggtgggaaagaaagggaaagcagtcatatacacctgagcaagagaaggcatgtcctgttttttaatatatgtcacgttgacttttattataaactttgaccattcgttttattcaaaagttttgtgcaaatcttaaaaatataaatattgcttaaggtttcttagtgataaatcaagccacaacaaaaaaaaagatatttacttcaattttttaaataagatgaatggtcaaacatgatgtaaaaattcaatggcgtcatatattgaaaaacggagatagtactagttttggtttgccttatacaactcaatggactaactcattatttatgtggttttctctaggaggagtatgaagcagcacgaactgagttgatagaggaattaaacaagggtgtttctttggagaagctacgagcgaaactgacaaagacacctgaggcaactgatagtaatgctcctgcatctgaaagcactgtgactactaaagtcccagaggaacttgtacaagtccaggcttacataaggtgggagaaagcaggcaagccaaattatgccccagagaagcaattggtactactctaaattatcagctcaacaagcttttgctaaggtgactctttatgaagatttatattttgttttcgctaggtcgagtttgaggaagcaaggaaggaactgcagtctgagttggataaggggacctcagttgagcagttgaggaacaaaattttgaaagggaacattgagacaaaagtttccaagcagctgaaggacaaaaaatacttttctgtggaaagaattcagcggaaaaaacgagatattgtgcaactacttaaaaaacacaagcctactgttatggaagcgcaagtagagactcctaaacaacccactgttctggatctcttcacaaagtcattacaggagcaggataactgtgaggttctaagcagaaagcttttcaagttcggtgacaaggagatactggttaggattcttgactgacatttcatattcacaaaccttgcatccaccaatctaatctggcttaactgtttttaagggaattaccaccgttgctctaggaaaaaccaaagttcacttggcaacaaactatatggagccacttatacttcactgggcgttgtcaaaagagaatggagagtggcaggtaaaaacaaacatgtttgcaactcctaaagctatgaactcatcatctgaaatagacaatgtgggcctgtactgatggggtgctttgtaactgtgaaggcacctccctcaagcatattgccatctggttcatcattgctagacaaggcatgtgaaacttcattcagtgaatatgaattgaatggtctgcattgtcaggtatggataattttatcagcctattattttccattgtcttttacatttcctgtcatctaagtacttccccatttccaggttgttgagatcgagcttgacgatggtggatacaagcggatgccctttgttctccggtctggtgaaacatggatgaaaaataatggctctgacttttacttggatttcagcaccaaagttgcaaaaaatacaaaggcaattgcttctgtccactttttgcatagcaaccatgaaacttttttccctttgttttaaggataactttttttacgacatgttttaaggataaattcctcatatgccactgaatatttgctatatcccttattttccactcatttcctcactgatatgtgtcaattagcggcatgtaagagatgacttaggccttgttcggttatgcccggattcaatccggaccgggaatgacaagtataataagaaatttatatagatacaatgagagaccgggatttattccaggctgggaactaatttactcatgatatggacaataagagaccgggaatcaatccactagtcaagaggtgtagaactaatctgaatgttttgttgtccctatcatgagtaaattggttcccgatctggaataaatcccggtctcttattacatctatcataaatttgttactatacttctcattcccggcccggattgaatccagatgtaaccaaacaaggccttaaaaattttcaatgtcaaataagaatatctaaataattgtggtaaaaatcacttactaataaactgttgaatatattcgtaattaaaggatactggtgatgctggtaaaggcactgctaaggccttgcttgaaagaatagcagatctagaggaagatgcccaacgatctcttatgcacaggtcaggtgacacaatatctattacttgtatgacttgttctgtgtgttaaaaaaatccctgaactacctttattcctctacagattcaatattgcagcagatctagttgaccaagcaagagataatggattattgggtattattggaatttttgtttggattaggttcatggctacaaggcaactaatatggaacaagaactacaatgtgaagccacggtagatacttgtttcatattcttcagtgaattttctctctgtgcaaaaagaaatcaaattaactacataagtacttttttcttgtgatgggaataaaaaccttctagtcctaataaagcataacaggaaaaaaaatagaatgctgtttagcagactgaacctattctatttgcatatcacacaaacatgactttgttgcatcttctttaacatccataatgatctacaactatgcagtgagataagcaaagcacaagataggtttacagatgatcttgagaatatgtacagaacttacccacaatatcaggagatcttaagaatgataatgtctgctgttggtcggggaggtgaaggtgatgttggtcaacgcattcgtgatgagatattagtaatccaggtaaattaatgttcctaggtgaatatcaacttgtttgttgatcaacttgaactatacaacaataaatactagttggttggtattgtagagaaataatgactgcaaaggtggaatgatggaggagtggcaccagaaactgcacaacaatacaagcccagatgatgtagtgatctgccaggtaattgacatgcagatatttaatgccatacagatttcagcattggggttttgatatttatggacttgtgtctcttcatgggtaggccctacttgattatatcaagagtgattttgatattggtgtttactgggacaccttgaaaaaagatggtataacaaaagagcgtctattgagctatgatcgaccgattcattcagagccaaatttcaggagtgaacagaaagatggcttactccgtgacttgggcaattatatgagaagcctcaaggtatgtcaaacatctggcgtagataattgagatatctatgcagtatctttacgattttacgtaaatttttgcttttgcaaaggccttattttgctttgtagttaagaaatattacaagatctaccctaaacaatatactgctaatcacatatgctgaaaggtggcattctctggtaacagtacatgttattatgtcccatatgtgctgaataagggtcgaaagattaggataaaggctagattgctctcgttggtactgag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