Difference between revisions of "Os06g0505400"

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(Created page with "{{JaponicaGene| GeneName = Os06g0505400| Description = Abortive infection protein family protein| Version = NM_001064251.1 GI:115468233 GeneID:4341126| Length = 4791 bp| ...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os06g0505400|
 
GeneName = Os06g0505400|

Revision as of 20:23, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os06g0505400

Description

Abortive infection protein family protein

Version

NM_001064251.1 GI:115468233 GeneID:4341126

Length

4791 bp

Definition

Oryza sativa Japonica Group Os06g0505400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:18850898..18855688

Sequence Coding Region

18850954..18851088,18851170..18851382,18853150..18853233,18854427..18855095

Expression

GEO Profiles:Os06g0505400

Genome Context

<gbrowseImage1> name=NC_008399:18850898..18855688 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:18850898..18855688 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcctcctccgcctcctgcctcgcccctccccctcttcgtctcccgtgctcctcctcctcctccccctctcccgccgccgccgcgaggttcggttctcggaggagggcggtagccgcggctgctccggccaagggatggaggctggtgcgcgtctcctgcttcaggcaggaggatgtcccgacgacgtctgacgacgggcccggcttcgagcacatctcgcggccggagagctcgcggggcgcggaggcgagtggggaggagggggaaggggaaggggaaggctcgagcgggcagcgtgagcgcggttccggggaaagggatgattggttcctcagagcgcaagagataaagagaaatttacgagaaagaatattcagatttcagactcaacgatggactgtaccttggaccggaaaaaccattgctcaggtcatgattttatggattgccacattttggtttgtgggttcctggatagtgccatttttggctcatgctgctggctttagcaaggaatcattgacacataggggccaagcactctatagcctcttgacggacataactgaaggccttgctggaattgctattcttcaccattgtcttggtagatttcgtccccttcctccaggctggtttgagttcaatttgaagggcagatggtatttggatgtagcgttggggtgcctgttattcccgctggtcaattttctctctcacatcaacatcaacctaataccaatgtcatcagggccagtccctggggtttccagtgtagaacagtccattgtggcccgtgatccagtggcgatggttttgtatgctgtggtggtcactgtatgtgcacctatatgggaagagattgtgttccgaggtttcctccttccatctctaacgcgttacatgccacttccatggtcaatcctggtaagcgctgcagcttttgcactggcacacttcaatgcacagagggttatgcctttggtttttcttggtgttgtgatgggaggggtctttgcaagatcacgcaacttgttggcgtcaatggtgttgcacagcctatggaacggttttgtgttcttggatttgatgaagtga</cdnaseq>

Protein Sequence

<aaseq>MSSSASCLAPPPLRLPCSSSSSPSPAAAARFGSRRRAVAAAAPA KGWRLVRVSCFRQEDVPTTSDDGPGFEHISRPESSRGAEASGEEGEGEGEGSSGQRER GSGERDDWFLRAQEIKRNLRERIFRFQTQRWTVPWTGKTIAQVMILWIATFWFVGSWI VPFLAHAAGFSKESLTHRGQALYSLLTDITEGLAGIAILHHCLGRFRPLPPGWFEFNL KGRWYLDVALGCLLFPLVNFLSHININLIPMSSGPVPGVSSVEQSIVARDPVAMVLYA VVVTVCAPIWEEIVFRGFLLPSLTRYMPLPWSILVSAAAFALAHFNAQRVMPLVFLGV VMGGVFARSRNLLASMVLHSLWNGFVFLDLMK</aaseq>

Gene Sequence

<dnaseqindica>57..191#273..485#2253..2336#3530..4198#agattagaggcaaggcaggcaggcaggcagggctcgagctcccccttcccacacccatgtcctcctccgcctcctgcctcgcccctccccctcttcgtctcccgtgctcctcctcctcctccccctctcccgccgccgccgcgaggttcggttctcggaggagggcggtagccgcggctgctccggccaaggtacgccgcgcccgcccctcgattccggcttgatgcgtgcgtgccggggagtaatttgaggttctcttgtctctctctcagggatggaggctggtgcgcgtctcctgcttcaggcaggaggatgtcccgacgacgtctgacgacgggcccggcttcgagcacatctcgcggccggagagctcgcggggcgcggaggcgagtggggaggagggggaaggggaaggggaaggctcgagcgggcagcgtgagcgcggttccggggaaagggatgattggttcctcagagcgcaagaggttagccctgattgtttttttctagttgcaaagcattccattcgagctcctttttgtgttatgaggaatggtagtcaattcagatttagaaatgctatttactccctccgtttcatgttataagacgctttgattttctttcctagtcaaacttctttaggtttgattaagtttgtagaaaaaaaatagcaacatctacaacatcaaattagtttcattaaatctaacattgagtgtcaaaagtttcaatgcatgtttgttttgtcttaaaaatattactatatttttctataaacttggtcaaacttaaataagttaaactaggaaatgtcaaaatgtcttataatatgaaacgcacggagtagttagatgctagcaaatggactgtgcaaggtaccagctggctgaaccagtttctatactctcgtttcacgtcacgatgcctgcaattgtgcaattaccattagaaaaccatgaatccatagttgcattctctcagtgccttggatgttttattacagcggcacatagatcagtgttaaaacttaatctatttagttagatggagttggtccacatttacatatactgtccaattcttctaatgcataataactgaaatatggggtacacatgaaacacactcttatgttatcctctatatggtctgtaaaattttaattttctatctacttgccttaaaacacagaagcaagggaaagagcaccttttatacattcaaagggagaaaagttgtacatctgtctgcttaacctctaaaaatgagagatctgctggataggaaccttaacctatagagtagaaggatcatatgcaaccacaagagagaagttgctacacttcctgatgttgggagaattagcagtatcaccacccacttgcaactcatatttaagaacctctgacgaacattacaatcatgccaattcttgcatttcgacttctcttaaaggaaataagaatcttgaacttaccctatgtaaaatatttgtactttcacgagtttatggtactggtgatgttccacatcttagtccttcttaaccaagtagatctaggcttgtaggcttacttccgaaccaagcttaagccaaggactaaatactgtacctatcctcatgaaaaaagctgaagcctgttgtgggattatagctgcagcttgcttcacccagcattttgggattaactaagaaacttgtttattaatcttaacaccgagctgtataagttactttttatgatgagcacagtcaaagtgcaatcgaggctttagcaggcaatctttttccttgttatcaaaatgaacaaaaatctagatcactttatttttattttttttctcactagcaaccttttcctttacactttgcgttgtacctagagaaaataattaatatttttcattaaaaatcagcttttcatgactgccaacagaaggataaatgaaagcttaataaattagcaacaaatctcccaaaagaataacttaatcaataggtttagccctgaattgtgattctttttttttatgtatatatagtggacgtagcagaacattctaatcttcttgctaaaaaagttacttgtgcatactgtcccatcactagtttacaatgcaatttactcatacatacattgtcagctagtcttgatattgtattttcttgtcttcagtgtttgtctttgtcgactccttatcatcacgtaggctttgtttttatcttaattttataatttgtcttgcagataaagagaaatttacgagaaagaatattcagatttcagactcaacgatggactgtaccttggaccggaaaaaccattgctcaggttaattctttacttcttcaatccatgctctcggtgctcctttgtctattgcagtaatagacactagtagacagctagcttacaactgattttatcttaaatgtgcatcatctacttaaaatgggagtatgctataaagatgtattgcgcatctagtgttgatatggattgaaacatgctatctgttatgatcctaggatcatcaaagggtaaacatccatccagagggaggccggaagtagaacagcggtatgatggagggcctccaactggagaggaatagatctagaatagctggccatatgagaggccagaactgcaattagaggctagaaacatgttcagtcatctttccttgcttaatgaacatagatacaacctcatccttgtatagatggatgatttctctaaaaaatataaatagatctgatgattgacccttaagaaacttatctctaagatacaggaaatagatgattactcaatctaatcttaactctgaaataagatacctaaaattgctgtacaggaaatctgaggctgtgttcatgcacatgaaattttacacatgaattgtaattcctgtaagcgacacttaatgtgctgaatgaatggagatccaattcaagatttttattttagcattgtactgatttgtttacatatggcttcttagttgttaggttgtagatgatatcactatcttttatttaatatttatgcaaacaaactaacacttttttccttcaatgcatgttccatttttagttatgattatctccaaaaaaaagttatgatatgtattctagtgaggtattgacgcatgatagaaagggtgattggtgggcatatcgcaagaggcctcattcaacttttccttctcacagggtgtatattggctatgaattaccaggctaaagtttattagtcaaaccaatgctgttgactaagtcaaatgatctagtttacataaaatgtggcaaaatagcttaggacatataagctaaatgatagtaatatatatacacatgataccgtattcaactattccttcttctcacagggtatattggttaaggattaccatgctaaagttattagaaattgatgttgtggattaaatcaaatgatctcttagcagtttacataaaatgtggtactaagataaacttggttacacttactgaatgcaggtcatgattttatggattgccacattttggtttgtgggttcctggatagtgccatttttggctcatgctgctggctttagcaaggaatcattgacacataggggccaagcactctatagcctcttgacggacataactgaaggccttgctggaattgctattcttcaccattgtcttggtagatttcgtccccttcctccaggctggtttgagttcaatttgaagggcagatggtatttggatgtagcgttggggtgcctgttattcccgctggtcaattttctctctcacatcaacatcaacctaataccaatgtcatcagggccagtccctggggtttccagtgtagaacagtccattgtggcccgtgatccagtggcgatggttttgtatgctgtggtggtcactgtatgtgcacctatatgggaagagattgtgttccgaggtttcctccttccatctctaacgcgttacatgccacttccatggtcaatcctggtaagcgctgcagcttttgcactggcacacttcaatgcacagagggttatgcctttggtttttcttggtgttgtgatgggaggggtctttgcaagatcacgcaacttgttggcgtcaatggtgttgcacagcctatggaacggttttgtgttcttggatttgatgaagtgagctattctggtgagactgcaacttcgggcacctgagacaagttctactaagactatgttttgcgtctttcgtggagatgatgaagaccagtctattcaggacacaggggacacaaggtggtagtcagatttttgtggagaaattgtgtagagtaaagagaaaagagcagtttgttggcgcgctagtgcaggaggaatagtctttagggtgttattccttggcctgaggcccagaagcgtctttgttgctttcgtgtaaattacatacgcatgagaataattgtctcatcgtgtatagatttcccatttcgtattaaattgtgtattcgtttcccctagtgtgggctctggaaaataaattcatttagcaagacggccactatgcattcgaccgattcttttgcccattagattaataagctgtagtgattctaaattcagagaaaactatcagtattatgtgttgagatgctttgagcgatgttatgtatctaaacgtgaatgagcattggtggtgttctgcatatctcgtgtgagttgtaaaaatccaggagaatgcctcgatcgatggaatattattttcatggctctctt</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0505400, RefSeq:Os06g0505400