Difference between revisions of "Os06g0507400"

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(Created page with "{{JaponicaGene| GeneName = Os06g0507400| Description = Similar to GAMYB-binding protein (Fragment)| Version = NM_001064261.1 GI:115468253 GeneID:4341137| Length = 5671 bp|...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os06g0507400|
 
GeneName = Os06g0507400|

Revision as of 20:23, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os06g0507400

Description

Similar to GAMYB-binding protein (Fragment)

Version

NM_001064261.1 GI:115468253 GeneID:4341137

Length

5671 bp

Definition

Oryza sativa Japonica Group Os06g0507400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:18958031..18963701

Sequence Coding Region

18958277..18959087,18959170..18959449,18959800..18959863,18959958..18960076,18960662..18960787
,18963229..18963439

Expression

GEO Profiles:Os06g0507400

Genome Context

<gbrowseImage1> name=NC_008399:18958031..18963701 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:18958031..18963701 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggacccggacttctcgcgggcgagccgaggcccgagcttcgcgttcgccttcaactccgtcaacttctccgaccgggtgctgcggatcgagatcgtcgccggggacgacgcggcgggggccaagggcgccgcgggggaagggtgctcctcgctcgccgactgggcgcaccagcggaagcgacgccgggaggagctccgccgcgagaaagaatcaggaaaatacacggatctggaaacctgtaaagttgaagcagaagaatgtgatacctatgaggaaaataatgaggaacctgtagctatgatagaagaatctccaccagatattggacaagatggtgaggatggagacagctgcgattcatcctggagtatggagtgtacccaagtcttgagagtaaagtctatttacatcagttctgcaattctagctgcggaaagccctttcttttataagcttttctcaaatggcatgaaagaatctgatcagaggcatgctactcttagaataactgcttcagaggaaaatgccctcatggagcttttgagctttatgtatagtggaaagttgacaacaaatcagccaacccttctgctggatatcttgatgattgctgataaattcgaggttgtttcttgcatgaggcattgcagtcaattactaagaagcttgcctatgactacagaatctgcactgctctatctagaccttccttcgagcatttcaatggctgctgcagttcagccactgactgacactgccaaggcattccttgccaacaagtacaaagatttgaccaagcttcaagatgaagcgatgaatattcctctggctggtattgaagccatcctatggagtaatgatctgcaggtggcatcagaggacgccatctatgattttgtgatcaagtgggcacgttctcaatacccaaaactggaggagaggcgagagatcttgggtactcgtttgttgccactggttcggttttgtcatatgacctgcagaaagctgcggaaggtccttgcatgcaatgatctggatcatgaacaggcaactaaatgtgtcaccgaggcacttctatacaaagctgatgcaccacatcgacagcgtacccttgctgcagatgttttgacttgtaggaaatatgctgagcgagcttacaaatatcgtccacttaaggtggtggaatttgatcgaccatatccacagtgtatagcatacttggatctgaagcgtgaggagtgcagtcggcttttcccatctggacggatatactcacaagcgttccatctcgcagggcagggcttctttctctcagcacactgtaacatggatcagcaaagtgcattccattgctttggtctgttcctagggatgcaagagaaaggctcgactagtgttactgtagattacgagtttgccgcaagaacaaggccatcaggcgagtttgtcagcaagtacaagggctactataccttcaccggtggaaaggcggttggataccggaatctatttgcaattccatggtcatcgttcatggctgatgacagcctcttcttcatcgagggggtactacacttgagagctgaattaaccataaaacaaccctag</cdnaseq>

Protein Sequence

<aaseq>MDPDFSRASRGPSFAFAFNSVNFSDRVLRIEIVAGDDAAGAKGA AGEGCSSLADWAHQRKRRREELRREKESGKYTDLETCKVEAEECDTYEENNEEPVAMI EESPPDIGQDGEDGDSCDSSWSMECTQVLRVKSIYISSAILAAESPFFYKLFSNGMKE SDQRHATLRITASEENALMELLSFMYSGKLTTNQPTLLLDILMIADKFEVVSCMRHCS QLLRSLPMTTESALLYLDLPSSISMAAAVQPLTDTAKAFLANKYKDLTKLQDEAMNIP LAGIEAILWSNDLQVASEDAIYDFVIKWARSQYPKLEERREILGTRLLPLVRFCHMTC RKLRKVLACNDLDHEQATKCVTEALLYKADAPHRQRTLAADVLTCRKYAERAYKYRPL KVVEFDRPYPQCIAYLDLKREECSRLFPSGRIYSQAFHLAGQGFFLSAHCNMDQQSAF HCFGLFLGMQEKGSTSVTVDYEFAARTRPSGEFVSKYKGYYTFTGGKAVGYRNLFAIP WSSFMADDSLFFIEGVLHLRAELTIKQP</aaseq>

Gene Sequence

<dnaseqindica>4615..5425#4253..4532#3839..3902#3626..3744#2915..3040#263..473#ttcgtcgtctcgtctttgcgattcgtccgcttttgcagattggcccctcgggttcgcgcgtatttacgaccacgcccccctccgcctcttcttcctcgcctccgcgggctccttctccttctggaagctgctgctgctgctctcgctagggttagggtttcggcgatggaggcggcggtggcggtggaggtggagaggtgaggagaggaggtcgcgggcgcacgagtgcggtttggttgattggaaggggaggagaggggggatggacccggacttctcgcgggcgagccgaggcccgagcttcgcgttcgccttcaactccgtcaacttctccgaccgggtgctgcggatcgagatcgtcgccggggacgacgcggcgggggccaagggcgccgcgggggaagggtgctcctcgctcgccgactgggcgcaccagcggaagcgacgccgggaggagctccgccgcgagaaaggtgagcgaggattcctccctcctcctcctcttcttcttgcccggtccaaccctcggtgggctcgtgagcgatttcgattcgattttgggggggcgttcgttggattggaaccctcgatttctggcgagttgggtggaggcggtggtgcctccttttctccgcgatgatttgatttgactatctgctggaactttaggtagtaaaagccgttggttaggtttccatggtgggagagagagagagatggtggaacaactttacctttttttttttgtttctctctctcaaatatcaaaatttgaatttcgatgttctggtttactttttctttgaaaattttcagctgtcgcatttgattttaggtaaatgatgtgtaatagatatgcttcctgatcgacatggtgaggatatggcattagttccggaatttagagcatcaccaagagttacccaagattcaatctcttcttgggatttcgtaattaggatttaataacgcatgaaaatatctctcgtcaggagttatcctaaatttgagtctaaaaagaagtgggccaccaacagaaacagttgcttccccctccgcgggatagctcttggtcgcccgcactgccgattgggagcaagcgcggtgcggtacttccggagagcgagatctcgggtaatggggattccatttttttggttttctgttttggggcactgttggatttttttttaacaaaaatcccaaaattttgggatatggattgattttgagagactattggtgatgctctaagagagtttgtccaagttttggactatattcgtgtgttgtctgtagtcgatttatgatggtattgcatgctactccttgtatgtattctgaacattttggactgcaactgaataaatgttcaactcttgggagcaaacataccttgctagtatttctcttagtgacatgttacagctagctgctgctgataccttcccatttcctttgtgaagtttataagttttgaagtttgtgtgacttctatggttctacttattgaagaaatgttctaatgcaataacgctaatatgtgatcctctggagttcagaatggaatgctccttaacaagttgttagacaccatccttacttatgtgttaatctcacacttggttttggtcaccttcatacaatgaataatgggaatcaacactttgtacaaattgtagaaaccttaattctaatggcatcaacgaattttcatgtgtggaatgatctaatgatattttcacatgtcatacagattggtttgctatgtacatggttcatgagggtcaatttgtggttgctgtgtcgtgcttcctcgtcatatttaagataattactgtggcttgtctgaaattaaattactattggaaaacttctgttatccaattgttgtttctttcacatttgttccattttgttaggaatgtggtaattattccatttccaagcttagcttaaaataaaagcagttaaccaaacagaaaattagttgcaccaaatgatattatcataataccaaaaggaacctgatttgacagtgggaaaagagaatagggttgaaagggatcaatggagcggagggaacatggacataaatcagtagaggttcttgaggagaaataaggggatgttatctatgtaacacattgattttttgtttctctttgtgccataggtgtcatctgatgattatttgttcctttattgactagaatggatgttagtaatagacaaaacagggcagcttatggtataaatttgagcagcaagagagagaggtttttggggctacgaagctggctgattcatcttctcttatttatagcagaaatagaaagatacggaacatccgtagtgctgggattggagtgatccaaatcaatccaaatctgatgttcaaggattatggggagaattgtgaatataatctttgcagctgttagtttgagtcaataagttaggtcttctatttagggaacaagaaagtcataagggatgttctgtagctctttcagctataaaagagatgaattagctagctgcagctcatttgcagcccccaaaacctatctctcctgctgctcaattccataccataagctgccctgttctgtctattactaacactagaggtggttagttgtcatatctcccctgttacgtggaatgcttaacatagttcattttgatagttcgagttcatgtcttccaatccatgtatccaacttgtttcatcacatttgagatttgtctgtaattctttgtgttagtatggtctaatgctactgcactcttccttcttattttgtgatagtctcattattgtttatgatttctatgtcactcatcagttaatagaatgtagatcttgtttttctaacaacttctttgctcttccatttcatggttccagaatcaggaaaatacacggatctggaaacctgtaaagttgaagcagaagaatgtgatacctatgaggaaaataatgaggaacctgtagctatgatagaagaatctccaccagatattggacaagatggttagtgcaatctaaattttgatttccattatgttcaaacaatgagcttttcaggttcaggaaatggcatgtaattgatcagaaactcccaacatcagtctccaaactttgaacgcgcaacactttggatatatatgttaactgattgctgatagcagatgtttttagagttcatagctagtgtggtagcgattacttccgagattattagttggcagatgttgattcaggttaatcattgtttagcctattgttgtcagtacagaacttggcagtcattgggtaaaattttaagtttatgggcatgtttcaaacttcattccgtgaattaggaataatttggaaacatgctatatatgggaaaacttagatgcttttgtagattagcaaacttattaagattgtccttatcttcttgaagcatcatacgaagctgcctgcgtagagtgtacaaatgctgttctgctagtaacacgttctccactgccttaagatcagaaaaaaatccatcttgggatgctgatgtgcaccctttcattttattcctatttcccgttttatttcatttgtactattatttgccaggtgaggatggagacagctgcgattcatcctggagtatggagtgtacccaagtcttgagagtaaagtctatttacatcagttctgcaattctagctgcggaaagccctttcttttataaggtaattctaattttgtcctgaaatgcattaattatttactctacttgtattgctagctagctagctaacaacatcatcgtgctcttcttgttagcttttctcaaatggcatgaaagaatctgatcagaggcatgctactcttagaataactgcttcaggtaattctgtagttcattgttcattgtttgtttctgtttgacaaaaactataatttctgcactatcctatgactgtctgtaacgtttttctttatattgctgatatgatcagttttggtggaacttaaagcttatatcgatctgatatttaatagtcctgaatatttattcaaattgatattctagaattcaatgttgtgcattttcctatatcatctctcaagaattatcaagaagtgtatgcttcatttgaaacttttccaaatgagaataagggagatttttctgctatttgattttcttgtaaacagatagcttttatctgatcattgtatgtctatctgaaacagaggaaaatgccctcatggagcttttgagctttatgtatagtggaaagttgacaacaaatcagccaacccttctgctggatatcttgatgattgctgataaattcgaggttgtttcttgcatgaggcattgcagtcaattactaagaagcttgcctatgactacagaatctgcactgctctatctagaccttccttcgagcatttcaatggctgctgcagttcagccactgactgacactgccaaggcattccttgccaacaagtacaaagatttgaccaagtgagtatttttctattgaatgcagctagaactaagctatgaaaacaatatgattcactgaaggaacacttcctgttttcaggcttcaagatgaagcgatgaatattcctctggctggtattgaagccatcctatggagtaatgatctgcaggtggcatcagaggacgccatctatgattttgtgatcaagtgggcacgttctcaatacccaaaactggaggagaggcgagagatcttgggtactcgtttgttgccactggttcggttttgtcatatgacctgcagaaagctgcggaaggtccttgcatgcaatgatctggatcatgaacaggcaactaaatgtgtcaccgaggcacttctatacaaagctgatgcaccacatcgacagcgtacccttgctgcagatgttttgacttgtaggaaatatgctgagcgagcttacaaatatcgtccacttaaggtggtggaatttgatcgaccatatccacagtgtatagcatacttggatctgaagcgtgaggagtgcagtcggcttttcccatctggacggatatactcacaagcgttccatctcgcagggcagggcttctttctctcagcacactgtaacatggatcagcaaagtgcattccattgctttggtctgttcctagggatgcaagagaaaggctcgactagtgttactgtagattacgagtttgccgcaagaacaaggccatcaggcgagtttgtcagcaagtacaagggctactataccttcaccggtggaaaggcggttggataccggaatctatttgcaattccatggtcatcgttcatggctgatgacagcctcttcttcatcgagggggtactacacttgagagctgaattaaccataaaacaaccctagatagtggacggcgtttaactaacagcgtctctgttcttgctgtgtccaaattagtgtgaaaaatgttgtgtgattcggacttactgttgttttctacttgagcaacctaaatagacagtttggaaacggcaagtaaaatcccttttgtttttacatcaaaagaggatcatgacatgtaacgcattgttatcgaactgtgaaaagtgattcttctaatcaaagttatgctgaatggtccacatcgtc</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0507400, RefSeq:Os06g0507400