Difference between revisions of "Os06g0554800"
(Created page with "{{JaponicaGene|
GeneName = Os06g0554800|
Description = Similar to ABC transporter (PDR5-like) isolog (PDR1 ABC transporter)|
Version = NM_001064385.1 GI:115468501 GeneID:43...") |
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| Line 1: | Line 1: | ||
| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{JaponicaGene| | {{JaponicaGene| | ||
GeneName = Os06g0554800| | GeneName = Os06g0554800| | ||
Revision as of 20:24, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os06g0554800 |
|---|---|
| Description |
Similar to ABC transporter (PDR5-like) isolog (PDR1 ABC transporter) |
| Version |
NM_001064385.1 GI:115468501 GeneID:4341281 |
| Length |
7415 bp |
| Definition |
Oryza sativa Japonica Group Os06g0554800, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 6:21990237..21997651 |
| Sequence Coding Region |
21990505..21990774,21990863..21991117,21991197..21991368,21991451..21991678,21991787..21991920 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008399:21990237..21997651 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008399:21990237..21997651 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgatactgggattggatatatgcgcggacacgatcgtcggcgaccagatgcagagggggatctccggtggtcagaagaaacgcgtcaccaccggtgagatgattgtcggtccaacaaaggttctattcatggatgagatatcaactggattggacagctccaccacattccagattgtcaaatgccttcagcaaatcgtgcacttgggcgaggcaaccatcctcatgtcactcctacaaccagcccctgagacttttgagctattcgatgacattatcctactgtcagaaggccagattgtttatcagggaccccgcgaatacgtccttgagttctttgagtcatgcggattccgctgcccagagcgtaagggtactgcagactttcttcaggaggtgacatcaaagaaggatcaggagcagtattgggccgacaagcataggccatacagatacatttcagtctcagaatttgcacagagatttaaaaggttccatgttgggctccaacttgagaatcatctctcagtcccatttgataaaactcgtagccatcaggctgctcttgtcttctcgaagcaatcggtgtcaacaacagagctcctcaaggcatcctttgccaaggagtggctcctcattaagcgcaactcatttgtgtacatcttcaagaccatacagctcatcattgtagcccttgtcgcgtcgacagtgtttcttaggacccagatgcacacaaggaatttagatgatggctttgtgtacattggagcactacttttcagtctgattgtgaacatgttcaatggtttcgctgagctctctttgaccatcacaaggttgccagtgttcttcaagcaccgggacctcctcttctaccctgcttggatcttcactctaccgaatgttattctgagaatcccattttccatcatcgaatctatagtctgggtgattgttacatactacactataggatttgccccagaggctgacagatttttcaagcagttgctgctagtgttcttgatccagcagatggcaggtggccttttcagagcaactgctggtctgtgcagatccatgatcattgctcaaactggaggagccctggcccttctcatatttttcgttcttggaggatttcttctgccaaaagcattcatcccaaaatggtggatctggggttactgggtttcaccactgatgtacgggtataatgctctagcagtcaatgaattctactctcctcggtggatgaacaagtttgtactggataacaatggcgttcctaaaagactaggaatagctctgatggaaggtgccaacatcttcactgacaaaaattggttctggattggagcagcagggctcctgggtttcaccatgtttttcaatgtgcttttcactctgtcactcgtttatctgaatcctctgggcaaaccacaagctgtcatatctgaagaaactgcgaaggaagcggaaggcaatggggatgcaagacatacagtaagaaatggcagcacaaaatcaaatggtggaaatcacaaagaaatgagggagatgagattgagtgctcgtctgagcaatagttcatcgaatggagtttcacgactgatgtccattggtagcaatgaagctggtccaagaagaggaatggttcttccatttactcctctatccatgtcttttgatgatgtgaactactatgtcgacatgcctgcagaaatgaagcagcaaggagtggtggatgataggctccaattgttacgtgacgttactggatcatttaggcctgcagtgctgacagcactcatgggagtcagtggagccggaaagacaactcttatggatgttttggcaggaagaaagactggtggttacattgaaggagatatgagaatttctggttatcctaagaaccaagaaacatttgcaagaatttctggctactgtgagcaaaacgatatccattcacctcaggtcacagttagggagtctttgatatactctgctttcctgcgccttccagaaaaaataggagatcaagaaatcactgatgatatcaagattcaatttgttgatgaagttatggaactagtggagctcgacaatctgaaggatgcgttagttggcctgcctggaatcacagggctttcaacagagcaaaggaagagattgacaatagcagtggagcttgttgcaaatccctcgatcatcttcatggatgaaccgacttcaggtcttgatgcaagagcagcagccattgttatgagaacagtgaggaacacagttgacactggacggacagtggtttgcacaattcaccagccaagcattgacatatttgaggcttttgatgagctgctactactgaaaagaggagggcaggtgatatactctgggcaattgggtcgtaattcccagaaaatgattgaatatttcgaggcaattcctggtgtgcctaaaatcaaagataagtacaatccagctacatggatgcttgaggtcagttcagttgctgcggaagtacgcttaaatatggactttgctgagtactataagacatcagacctgtacaagcaaaacaaggtattggtgaatcagctaagtcaaccagagccaggaacatcagatctgcattttcctacaaaatactctcaatccaccatagggcaatttagggcctgcctctggaagcaatggctgacctattggcgcagcccagattacaatcttgttagattttccttcactctgttcacagccttgctactcggcaccatcttttggaagatcggcaccaagatgggaaatgccaattctcttagaatggtcattggagcaatgtatacagcagtgatgtttatcggtatcaacaattgtgcgactgtgcagccaatcgtgtcgattgagagaacagttttctaccgagagagggctgctgggatgtactctgctatgccctatgccattgctcaggttgtcatggagataccctatgtgttcgtccaaactgcatattataccctcattgtttatgccatgatgagcttccagtggacagcagccaagttcttctggttcttcttcgtctcctacttctcatttctctacttcacctactatggtatgatgacggtggcaatctcaccaaaccatgaggttgcagccatctttgccgcggcgttctattccttgttcaacctattctcaggattcttcattccgagaccaaggattcccaaatggtggatctggtactactggctttgcccattggcatggacagtgtatgggctcatagtgacacagtatggagacctagaacaaatcatctcagtccctggccaatccaaccagacaatcagctactatgttactcatcattttggatatcacaggaaatttatgccagttgttgcgccggtgctcgtgctcttcgctgtgtttttcgcgttcatgtatgccatttgcatcaagaagttgaacttccaacatcgatag</cdnaseq> |
| Protein Sequence |
<aaseq>MILGLDICADTIVGDQMQRGISGGQKKRVTTGEMIVGPTKVLFM DEISTGLDSSTTFQIVKCLQQIVHLGEATILMSLLQPAPETFELFDDIILLSEGQIVY QGPREYVLEFFESCGFRCPERKGTADFLQEVTSKKDQEQYWADKHRPYRYISVSEFAQ RFKRFHVGLQLENHLSVPFDKTRSHQAALVFSKQSVSTTELLKASFAKEWLLIKRNSF VYIFKTIQLIIVALVASTVFLRTQMHTRNLDDGFVYIGALLFSLIVNMFNGFAELSLT ITRLPVFFKHRDLLFYPAWIFTLPNVILRIPFSIIESIVWVIVTYYTIGFAPEADRFF KQLLLVFLIQQMAGGLFRATAGLCRSMIIAQTGGALALLIFFVLGGFLLPKAFIPKWW IWGYWVSPLMYGYNALAVNEFYSPRWMNKFVLDNNGVPKRLGIALMEGANIFTDKNWF WIGAAGLLGFTMFFNVLFTLSLVYLNPLGKPQAVISEETAKEAEGNGDARHTVRNGST KSNGGNHKEMREMRLSARLSNSSSNGVSRLMSIGSNEAGPRRGMVLPFTPLSMSFDDV NYYVDMPAEMKQQGVVDDRLQLLRDVTGSFRPAVLTALMGVSGAGKTTLMDVLAGRKT GGYIEGDMRISGYPKNQETFARISGYCEQNDIHSPQVTVRESLIYSAFLRLPEKIGDQ EITDDIKIQFVDEVMELVELDNLKDALVGLPGITGLSTEQRKRLTIAVELVANPSIIF MDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGQVI YSGQLGRNSQKMIEYFEAIPGVPKIKDKYNPATWMLEVSSVAAEVRLNMDFAEYYKTS DLYKQNKVLVNQLSQPEPGTSDLHFPTKYSQSTIGQFRACLWKQWLTYWRSPDYNLVR FSFTLFTALLLGTIFWKIGTKMGNANSLRMVIGAMYTAVMFIGINNCATVQPIVSIER TVFYRERAAGMYSAMPYAIAQVVMEIPYVFVQTAYYTLIVYAMMSFQWTAAKFFWFFF VSYFSFLYFTYYGMMTVAISPNHEVAAIFAAAFYSLFNLFSGFFIPRPRIPKWWIWYY WLCPLAWTVYGLIVTQYGDLEQIISVPGQSNQTISYYVTHHFGYHRKFMPVVAPVLVL FAVFFAFMYAICIKKLNFQHR</aaseq> |
| Gene Sequence |
<dnaseqindica>6878..7147#6535..6789#6284..6455#5974..6201#5732..5865#5541..5624#5170..5460#4615..4962#4333..4508#4134..4250#3893..4049#3604..3719#3346..3506#2946..3262#2579..2860#2181..2482#762..852#544..546#aatcatataggacttggttgcacatttgtccacaagcaaacaactagtactaaccatgacccaggttggtgaacactgcacaccaaatgggaaaaggggaatttttttttcttttttttttcaaggatccaatcaaccaccaagtccactactatgattcttgggcacatacttctcctactgattagtagcagcagcagcagcaggcaggagggagtgggtttgtttgctgactctcttgtgtcttgaccacaaaggatggttctttcttccctcttcttcttcctccctcctcctcacctactgctaattgggagatggagctcgaattgagttcttggtggggcatccttgtagctttgggaggggggattggggggttggtgcacccacttggcctggtggaaatggcgcgcacccgtggtgatgatgcccaccacatgtttgttgatatgcccagccaaagcttctgcttcttatcagctttactgcgagtttccgagcactggccacgtagtaacataattacattgggcaggatggatggtaggtaaagtttgaaatgtgtgttttttttttttttttggggatggggggggggggcaggtgacagtagctttcaggggcattaagcccatgcttgacatggggttagcaggaattagtcatgttaatttaaactgtcttgatcccgacggttgcaagtagcaactggagctggtgaaaattatttctttttgactgaattttcttgggagcagatactgggattggatatatgcgcggacacgatcgtcggcgaccagatgcagagggggatctccggtggtcagaagaaacgcgtcaccaccggtaagctgcttccgtcagcattgtgtcatgctcatttcagcccatgaaaggagctgctgctctgtgcctttgttcctttctggtttagggggtagaaggcacagatgtacgaattaaactaaatttaaacttagaagggcctgaaaggaacttgcaaattttttttttaagtctttctagaagactatgatgtgtaggagacaatgcaattccggtgtctacatcttgtggttcctactggaaaaaggtgtggtgatcatgagatatatgtgtgcctctgaggtccacacatgaagaagtgcatgaccacttgactggggtgcatgctgtattgtacaggcatcttatggttaatgcactgcatagttgttggatggtcacttgtccagtgaccactcttatcctctgagagtgtgaggaagagctgtagcttgttcattccgcatcctatactgtagacagtaccgcattgtaggttattgggttcagtgtgatactgatagctattagaatgaaccaaaagtgcatgggggcagagagatatgaccgagtagtacttacttttgggactattgcattataggagggttcaagttttgctggatcctgttgtcataccgattttggttggaaaagctattgctaagtgctaaatactacggataaaaatgaatcatacatgttcaaaacagattactgtgcttttcttttccattaaatacattcacttaagaacagttctgttgctgccctaaaaaagaacatttttgcaacaagaaacacttgaaattctttacatggttccaattatagtattagcttctagacgtgtaacaagtctaatgcatgaagatattgtgttatgtttggtgcttgcaatctaaattatcagttctggattggcaccggcacgtttccactcccgatattcccctaggcagattcacccccatccccaccattgccttcttttaacatgactatacataaaaatattttcatactatattattattttctatttctcataagtgtttcacacaaaagatatcggtcaaagatggattttagagaccaaacccttccaaaatgtcatatattctggaagaaaaggtgtacaatttcttttgcataattacattatatggctaaaatctagaatgcaattatttttcttgtaaaaatatgttaagaagtgaaaagcacaaaaactagcaattcaacaaatgatcagtatgaactataaagtattgaaggtattgaccctttttttccccgaaaattgtaaggatgctaacaatgaacaaatttgctcatttggaatgcaggtgagatgattgtcggtccaacaaaggttctattcatggatgagatatcaactggattggacagctccaccacattccagattgtcaaatgccttcagcaaatcgtgcacttgggcgaggcaaccatcctcatgtcactcctacaaccagcccctgagacttttgagctattcgatgacattatcctactgtcagaaggccagattgtttatcagggaccccgcgaatacgtccttgagttctttgagtcatgcggattccgctgcccagagcgtaagggtactgcagactttcttcaggaggtaacatcatgcagttgtctaattattagaatctatgtttctgaaagcttcaatatgtgaatttacctgaacagctttattttgccaatttttcaggtgacatcaaagaaggatcaggagcagtattgggccgacaagcataggccatacagatacatttcagtctcagaatttgcacagagatttaaaaggttccatgttgggctccaacttgagaatcatctctcagtcccatttgataaaactcgtagccatcaggctgctcttgtcttctcgaagcaatcggtgtcaacaacagagctcctcaaggcatcctttgccaaggagtggctcctcattaagcgcaactcatttgtgtacatcttcaagaccatacaggtgagcaaagtttcctgttcagtcttgccacttctcaaaatacacaatgcaatcgactgacaccttctgccggtgaactttgaagctcatcattgtagcccttgtcgcgtcgacagtgtttcttaggacccagatgcacacaaggaatttagatgatggctttgtgtacattggagcactacttttcagtctgattgtgaacatgttcaatggtttcgctgagctctctttgaccatcacaaggttgccagtgttcttcaagcaccgggacctcctcttctaccctgcttggatcttcactctaccgaatgttattctgagaatcccattttccatcatcgaatctatagtctgggtgattgttacatactacactataggatttgccccagaggctgacaggtacacaaaaagcagaaaaagaattaaacatgaattcaggaaagcaaggtttctgtccacttacctatcatctttctgcacagatttttcaagcagttgctgctagtgttcttgatccagcagatggcaggtggccttttcagagcaactgctggtctgtgcagatccatgatcattgctcaaactggaggagccctggcccttctcatatttttcgttcttggaggatttcttctgccaaaaggttttttttacttatctaattattttcactccacgttttttctgcacataaatgttgcagctctattgaatattactttgcccttgactgttaacagcattcatcccaaaatggtggatctggggttactgggtttcaccactgatgtacgggtataatgctctagcagtcaatgaattctactctcctcggtggatgaacaagtttgtactggtaagctcattatagcactgccttttcacttgtttgcgtatagaggttctttacagtccttgaggaagtatcacaaggtacaacagaaaaggcttaccttgtagtaccgcctcaagaaccttaaaatcccttgcaaatatgttttctgacaatgtttgcatgcatcttgacaggataacaatggcgttcctaaaagactaggaatagctctgatggaaggtgccaacatcttcactgacaaaaattggttctggattggagcagcagggctcctgggtttcaccatgtttttcaatgtgcttttcactctgtcactcgtttatctgaatcgtaagtatctgaattaaaatctaaatgcttatgtgattatagttattggaccaatacgtgatttgctggttctttgattgttagctctgggcaaaccacaagctgtcatatctgaagaaactgcgaaggaagcggaaggcaatggggatgcaagacatacagtaagaaatggcagcacaaaatcaaatggtggaaatcacagtaagaaactcttcaagtcataattaaatctgaaaaaattggaagtttttaaaactgaggaataataaggcaattatttcagaagaaatgagggagatgagattgagtgctcgtctgagcaatagttcatcgaatggagtttcacgactgatgtccattggtagcaatgaagctggtccaagaagaggaatggttcttccatttactcctctatccatgtcttttgatgatgtgaactactatgtcgacatgcctgcagtgagtttacctatgcttaacttctcttggcatcttgtcctgttccctgtcgtatcctcaatcgaaaatttgtaatatttgattgagattaatgttttatacataggaaatgaagcagcaaggagtggtggatgataggctccaattgttacgtgacgttactggatcatttaggcctgcagtgctgacagcactcatgggagtcagtggagccggaaagacaactcttatggatgttttggcaggaagaaagactggtggttacattgaaggagatatgagaatttctggttatcctaagaaccaagaaacatttgcaagaatttctggctactgtgagcaaaacgatatccattcacctcaggtcacagttagggagtctttgatatactctgctttcctgcgccttccagaaaaaataggagatcaagaaatcactgatgatatcaagattgtaagtcatgtctttttccttgtcaaaacactgcatcttttttcatcatcagggtgtattataagtcatttacttttgtttgttgctaacacaaaacattattgtcaatcaggtgttttaattttttgtgaatattgggtggttaatttctgattactaggatttgtcgtcacaatttgtcaaactcacaagttcaattgtttccagcaatttgttgatgaagttatggaactagtggagctcgacaatctgaaggatgcgttagttggcctgcctggaatcacagggctttcaacagagcaaaggaagagattgacaatagcagtggagcttgttgcaaatccctcgatcatcttcatggatgaaccgacttcaggtcttgatgcaagagcagcagccattgttatgagaacagtgaggaacacagttgacactggacggacagtggtttgcacaattcaccagccaagcattgacatatttgaggcttttgatgaggtgactatgaatagtttacttacatagtaattccaccttttagtaactaaatagtaactcgagcttgaactctcgtgcagctgctactactgaaaagaggagggcaggtgatatactctgggcaattgggtcgtaattcccagaaaatgattgaatatttcgaggtacagatagtttcagatggtggttaacttttgctaagtggaaggtgtgttatgaataactagaataaatttacttttctaaccaatctgctatttaatattaccaggcaattcctggtgtgcctaaaatcaaagataagtacaatccagctacatggatgcttgaggtcagttcagttgctgcggaagtacgcttaaatatggactttgctgagtactataagacatcagacctgtacaagtaagcgaaacatttttttttcttctacttttaaactcttatctttcttcttaaagtttttagttgttgtgtgtcaattctcatggaatagatgggccgtgttttcaggcaaaacaaggtattggtgaatcagctaagtcaaccagagccaggaacatcagatctgcattttcctacaaaatactctcaatccaccatagggcaatttagggcctgcctctggaagcaatggctgacctattggcgcagcccagattacaatcttgttagattttccttcactctgttcacagccttgctactcggcaccatcttttggaagatcggcaccaagatgtaaatacttcctctctttttcatctttgactccttaatcttaatgttccagtatctgacgtttttggtgtcttatgatcaggggaaatgccaattctcttagaatggtcattggagcaatgtatacagcagtgatgtttatcggtatcaacaattgtgcgactgtgcagccaatcgtgtcgattgagagaacagttttctaccgagagagggctgctgggatgtactctgctatgccctatgccattgctcaggtaacttatggtggtagctaaggcagttaaggtataatttgtttccaggagttgctcaactcttgataatttgttgtaggttgtcatggagataccctatgtgttcgtccaaactgcatattataccctcattgtttatgccatgatgagcttccagtggacagcagccaagttcttctggttcttcttcgtctcctacttctcatttctctacttcacctactatggtatgatgacggtggcaatctcaccaaaccatgaggttgcagccatctttgccgcggcgttctattccttgttcaacctattctcaggattcttcattccgagaccagtgagttttcttggatcaaaccgtttctttgaactttttattcttcttggaagatcaaagtaatggtgttattcatgttttatttcagaggattcccaaatggtggatctggtactactggctttgcccattggcatggacagtgtatgggctcatagtgacacagtatggagacctagaacaaatcatctcagtccctggccaatccaaccagacaatcagctactatgttactcatcattttggatatcacaggaaatttatgccagttgttgcgccggtgctcgtgctcttcgctgtgtttttcgcgttcatgtatgccatttgcatcaagaagttgaacttccaacatcgataggggcattgaaacaacaggcaaaatctggttggaaacttttttttggttttgaaccaaatcttcttttgtcctttccccacagataatatcttcttttatcctcacatttttgtggtctatatatgccatgtaaatatgctggtaggttttctgtattccatacatcgccaaatgtggcgaggtttcatatgaccttttagctttggaaatgtaaactttataagagcattgttgtcagaaattttgttcgtggcctattcttccattg</dnaseqindica> |
| External Link(s) |
