Difference between revisions of "Os06g0569900"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os06g0569900| Description = Ent-kaurene oxidase (EC 1.14.13.78) (AtKO1) (Cytochrome P450 701A3)| Version = NM_001064442.1 GI:115468615 GeneID:434...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os06g0569900|
 
GeneName = Os06g0569900|

Revision as of 20:24, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os06g0569900

Description

Ent-kaurene oxidase (EC 1.14.13.78) (AtKO1) (Cytochrome P450 701A3)

Version

NM_001064442.1 GI:115468615 GeneID:4341345

Length

9110 bp

Definition

Oryza sativa Japonica Group Os06g0569900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:22925651..22934760

Sequence Coding Region

22925794..22926111,22927900..22928093,22928202..22928361,22929306..22929560,22929644..22929784
,22929941..22930102,22930215..22930375,22934562..22934685

Expression

GEO Profiles:Os06g0569900

Genome Context

<gbrowseImage1> name=NC_008399:22925651..22934760 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:22925651..22934760 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagtcgctgctcgcagccggtgcgggagggatcggtgtggcggcggcggccgtcggggggtttatcgcggcggcgacactcgccgtggcaccgcccaagaaccgccgcaacccgcctccagctgttcctggtttacccataatcggaaatctgcatcaattgaaagaaaagaagcctcatcagaccttcacaaaatgggctgaaatttatggcccaatctacactataaggaccggggcttcttccgtagttgtgctcaattcaactgaagtagccaaggaggcgatggttgcaaaattctcatccatatctacccgaaagctatccaaagcactaacagtgcttagtcatgataaatccatggttgctaccagcgacagtggtgatttccacaaaatggggaagcgttatatcatgttaagcatgctgggtacttctgcacagaaacaatttcgtgacacaagagatatgatcatcaataacatgttaagcactttccatcaactggtgaaagatgacccacatgctcctctgatattcagagatgttttcaaggatgagctattccggttgtccatgatccagagcttaggagaggatgtgagttcagtctatgtggatgaatttgggagggacatttcgaaggaagaaatctacaatgctactgtgactgacatgatgatgtgcgcaattgaggtcgactggagagatttcttcccctacctcagctgggttccaaacaagagcttcgaaacaagagtgtttactacagaatctagacgaactgcggtgatgcgcgccttgatcaagcagcagaaggaaaggattgtgcgtggagaggcaaggacatgctatctggacttcttgctggcagagaacacactgacagatgagcaactaatgatgctagtgtgggaggcactcatagaggctgcagatactaccttggtcaccacagaatgggccatgtatgagcttgccaagaaccctgacaaacaggaacggctttaccaagagatccgggaggtgtgcggcgacgaggcggtcaccgaggagcacctgccgtggctgccgtacctcaatgccgtcttccaggagacgctgcgccgccactcccctgtcccgctcatacctccgaggttcgtcaacgaggacaccatgctcgccggctacgatgtccccgccggcaccgagatggtgatcaacctgtatgggtgcaacatgaacaagaaggagtgggagtcgccggaggagtgggcgccggagaggttcgccggtgggaggttcaaggtggcggacatgtacaagacgatggcgttcggcgccgggaggagggtctgcgcagggagcctgcaggcgactcacatcgcgtgcgccgccatcgcgcgcttcgtgcaggagtttgggtggaggctgagggagggtgacgaggagaaggtggacaccgtgcagctcaccgcctacaagctccacccgcttcatgtccacctcacgcccagaggaaggatgtga</cdnaseq>

Protein Sequence

<aaseq>MESLLAAGAGGIGVAAAAVGGFIAAATLAVAPPKNRRNPPPAVP GLPIIGNLHQLKEKKPHQTFTKWAEIYGPIYTIRTGASSVVVLNSTEVAKEAMVAKFS SISTRKLSKALTVLSHDKSMVATSDSGDFHKMGKRYIMLSMLGTSAQKQFRDTRDMII NNMLSTFHQLVKDDPHAPLIFRDVFKDELFRLSMIQSLGEDVSSVYVDEFGRDISKEE IYNATVTDMMMCAIEVDWRDFFPYLSWVPNKSFETRVFTTESRRTAVMRALIKQQKER IVRGEARTCYLDFLLAENTLTDEQLMMLVWEALIEAADTTLVTTEWAMYELAKNPDKQ ERLYQEIREVCGDEAVTEEHLPWLPYLNAVFQETLRRHSPVPLIPPRFVNEDTMLAGY DVPAGTEMVINLYGCNMNKKEWESPEEWAPERFAGGRFKVADMYKTMAFGAGRRVCAG SLQATHIACAAIARFVQEFGWRLREGDEEKVDTVQLTAYKLHPLHVHLTPRGRM</aaseq>

Gene Sequence

<dnaseqindica>8650..8967#6668..6861#6400..6559#5201..5455#4977..5117#4659..4820#4386..4546#76..199#atcaagagaatgcagtgcaagtgcaaactctcgcagtgagcctgtgtgatcgatcgatctgagtaggggtcggccatggagtcgctgctcgcagccggtgcgggagggatcggtgtggcggcggcggccgtcggggggtttatcgcggcggcgacactcgccgtggcaccgcccaagaaccgccgcaacccgcctccaggtaaccggccggccgggcccgttcgtcgatcgttcgatcgatccattgccgtgttttgccgtccgcttcctggcctgtggatatatatctacctatctagcttcattgaaatgttggagatggcatgcagctgatgaccctaattagcgatgaaaatggagtggatagtttctgctacagaagaaaaatgaatacggatatcgtgcggagcagataattattggatagtttttacatatatttgttttcccggatgcgaacaagaatatggtatcagaatttttgtcggatacatatatcgcatatctgctgaagacataaaacatataccatttctctctaactcatctttaacatacctctttagattttattattaatattatttaaatttttaaatatttttataaaatatactatatttatatattataatatcagttatatatgtatttttaccaactctgttatacatgcatgtagaacttaattagcactgtttagtctatgatcaaccttattatataaaaagagctaattatgtgtgttggtgtttgtttctattaaatgtttaggtggtttttgtgttccgagaaataaattcttggtattcgtgtcggatatatttgatgattatttgcattagagataattcttatttgttttcatatccgacctattcggttttgtatctggaaaaaaaaatacaaagatgaatacggtatgacccttatctgcataaattataaaaatacaaaatcaaaattatcttcataaattatacaaaaaaatagaaaaatgtttgtagcaacaaaatcacaattatatgcatgtaaattcaaatataaattcaatgatattatttttgtcaaataagacataatttataataaagtattattggtcaaaatttaaagaactgaatcttaaattgagtgcacaacttactaagtgggacagagggagtactacactagcttacccccacggtgtaaatattttttcatcttcgtttttattaaactgacaacttaaaataatgcaccacttttgttatagaggctataaacttctatattaattgaagaaaaagaaaaataagttcaaatacagaaataacataaatttgaaattaaaacaagaaattttcaaagaaaagtctatctaaacataacatgagattaattaaaattgagaataaacaaataaaagagttcaaataaaaatataatttgggaataactaaaactcgtaaaaaagaagtactaaaaagaggagtcaacctgtaacacaacacgagattagttatattcaaaataaaaaaaatataataaactatattacaatactaattccaaataaaatttaaaagaatcatgaaaatttgggaaaaaaataaaaataagtaagacaacataccaagaggagtccatagaatatataataattaaatattcaaagtatgatttaaaaatatagaaataacacgtataaaataacatttgtggggaaaaagaaaaaagagagtccattcggaaatacattttatatataactaaaattggatgtaaaagttatggaatattgagagaagtgttggtctaaaacataacacgagattaattatggttcgagatgaaactatatttatctataatattattaagatattcttggaaggagatatcatgtttgcaatggagactagaatttacaacattaattgtagaaaaaaaacaaaatctacactgttagatcatggtggaaccatattatgttgaatccatgaacaaatttgactagctgtctgctttccagtttgaatacaagggtttttttttttaattggacgtagatgtgcgagggtagcatggtcctaaaatatcaggatgtttagatcccacctaaaattttacatcctgtcacatcgaacgtttgaacacctgcacgaagtatatattaaatataggcttaaaaataactaattacacagattgcgactactttacgatacgaatcttttaagcctaattgctccatgatttgacaatgtggtgctataataaacatgttctaataacgaattaattaggcttaataaattcgtctcacggtttactgacgaatactgtaattagtatttttattagtgcccgaacaccccatgcaacaccctatataataactttacaccgatggatctaaacacccctagaatagaaaattccatttctatccacgtaagacaaagacaaaagtatgtctgtgttggtaaaattagagtagaaagaaattttgaatagaaacaacacttgtcgcacaggaaagtgaccaggtctgcatcctgctcaatctggtactatcaaataattaagtatgaataagtgagaagcagacctagtctgcatcttgctcaatcatcctagaatagagactagattgtagggagtatcaaatagtaactgtgattgagcatgatgcagactggtattgatggttgaatataagagaaactttggtagtgtgtgattgtgtaaatagataaaaatgcacattatcaacatgcaaatatgtgaatatttgtttttgagtaatattgttagatattaaaactttaaaaaaaatcaagttgcaaatgtgcggaccaccctactattttatttaaacgaactataaatggaggtgtggttggtggaattagagggccgtagaaggaattagaggttatggtgcgtaaggtgtaatggggccttaaaacttaacatgttatcacgatcaacgtgatatgactcgtagaactgtagaagatggatagcagaatacgaacaaacggccaatcacgacgactcgtagaatatgattacacctagttctaatcgatttagctttagatattaagcctattgtgccttccgtttttagttttgggtcttagttctcgaattaaatttaaaaatatactattaatttggtttttcgtagaaatattcgtgatatatactttttagcgaaaatataccagtgtcgcgtggtaggagcgcaagaccgcacggtatcgtgtgatgaagcatcgagaccgaacagtctcgtataaagaatcagcgagaccaaatgtcatgtccaacggagctacttaattagtcattaattaccctaattaatgattcattaacaataattagtgattaattattctaattagcgattaattaatcactaattaaccttattcaatcggcagaggcagtcgctatcgctcactgactgagcgagactgctcggtctcgcggtttggccgcgcgagaccacgtggtctgacgtcgccaccgcgtacatcctcgattccgtcgttcagtgctatttcgtcgtgcgagaccggtctcgcgctatgatcacgcgataccgtgcagtctcgcgttctcctcgcgcgagaccgttcacgacgtcactcccacgtcactttcgcggaatggttatacgagatcgacggtatatttcttctaataaatttacattctgaatatttttgagaaaccaacgaatgaacagtgtatttttaaatttaattcttctctctgaccatctggtcttcattttagtaatgccgctaattaagcatatacttagcactccatgtagagcttgtttagatccctggcaaattttttcatcctgttacatcgaatgttggaaacatacatggagtattaaatataaacggaaaaaactaattacacagattgcatctaaattgcgagacgaatcttttaggcctaattgctccatgatttgatagtgtgttgctacagtaaatatttgctaataatagattaattaggcttaataaatttgtctagtaggttacggattaattaggcttaattcgtctcgcaatttaaccatttttaaattatttgagcccacggtttttattatttttccgagatataattgctacgtaagcgccacgtcaataccacgtgggacgaagacctagtcaaaccagccatgtagttggcacgtcagttaaaaccgccttctaaatcgtcaagggatcttgtttgtgccggttttgacagttcagggacctgttatatctagttttggggtttaaggacgaaaatcggattcggtgtaaagctaagggacctcaaatgaacttattccttatttcattgtcatgcagctgttcctggtttacccataatcggaaatctgcatcaattgaaagaaaagaagcctcatcagaccttcacaaaatgggctgaaatttatggcccaatctacactataaggaccggggcttcttccgtagttgtgctcaattcaactgaagtagccaaggaggtaacttagaagttgtctatcatttctatcgacttgcataactctaaaatgatggtctcacatttgatttgatcataaataacacaaaccaatactgtactctcttttgcaggcgatggttgcaaaattctcatccatatctacccgaaagctatccaaagcactaacagtgcttagtcatgataaatccatggttgctaccagcgacagtggtgatttccacaaaatggggaagcgttatatcatgttaagcatgctgggtacttctgcacaggtatacatctcaacaatttcatttttcatttttagtactgattgttctcaataactccagtctgcatttccaatattgattatctgctaccagttacactttcagagtttcacttatctgtggtctaacaacgcaacgcgttttcataaatttcagaaacaatttcgtgacacaagagatatgatcatcaataacatgttaagcactttccatcaactggtgaaagatgacccacatgctcctctgatattcagagatgttttcaaggatgagctattccggttgtccatgatccaggtttggattgtctctctgaacttgaactgtcagatggtcgatttgttattttcggtactaataattaatgtcgcaaacttcagagcttaggagaggatgtgagttcagtctatgtggatgaatttgggagggacatttcgaaggaagaaatctacaatgctactgtgactgacatgatgatgtgcgcaattgaggtcgactggagagatttcttcccctacctcagctgggttccaaacaagagcttcgaaacaagagtgtttactacagaatctagacgaactgcggtgatgcgcgccttgatcaagcagcagaaggaaaggattgtgcgtggagaggtgagcaaaggcatactttgtcaaatgacatttttcatctttgcttctatgccaaaataatgttattacttccagagatcatctttttttttttataatggaatagataacatcccgactttttgctcaataaacagcccattattacaaagaatcactcaaacaaaagagtgtagatcaaaccaaattaaacacactcaagaaaaaaaataaagcgaccaaaccaaagataaagagcacacaattattcaagtctatttgtgaatctttatccataattgacaaaaagttgcatgatcgtcgtctcaagcttacgacatgcaacctttagaagctctccatcttcatcacacttttgtagttgtgcccaagaccggagccaatatgttgccctgaaaattgcctgcatatatgagaaagatggtaatttgtcaataatcaaatcattactactcaaccactgagcccaacatatagtagatgctcctacaagtattagtttgctcttcttcttgtcaaccccaaaagccaaccatcaaacatatgggatatggtattagggaggtataaaccaaaagcaaactgtaccgccctccaaacaaatttcgcaaaatgacaatccataaacagatgttggatagtctcatttttcatgcagaagtaacatcttaagcttccattccaatttcgtcttgctaaattatctttggttaaaacaaccccttcgagcaagtaccacatgaagattttaatcttgagcggcatcttaagttttcaaatgatcttatttctctcaatataactattattgattaaggctaaatacattggccttactgaaaacacaccattttgatggtaattcaatctaaagccatcaggaaaatgattcaattgaagagatcatcttcttttgactccatgaaactgagatatatgtgcaggcaaggacatgctatctggacttcttgctggcagagaacacactgacagatgagcaactaatgatgctagtgtgggaggcactcatagaggctgcagatactaccttggtcaccacagaatgggccatgtatgagcttgccaagaaccctgacaaacaggcaagaaatattgttactctgttccagctcatttttggcattcttggctttatcaaccaatacttttttttttggtctttttcttggcattcttggcatttatgacaggaacggctttaccaagagatccgggaggtgtgcggcgacgaggcggtcaccgaggagcacctgccgtggctgccgtacctcaatgccgtcttccaggagacgctgcgccgccactcccctgtcccgctcatacctccgaggttcgtcaacgaggacaccatgctcgccggctacgatgtccccgccggcaccgaggtaagcacaaccatgtgacaatggcgggccggcagggtttgcactttcggtttcggccaaaaatttcacaaactttggtgtttttggtacttctttttgcacgaaattatttgaaattttaattgaatttgaataaaattttgactaaattcataaaaactttgcaagataatgaaaggcttttttaaagataatggttaaaaatacaacctctatatctacactggaccataagaaaacaagaaatctcaactattataaaaattgaagatgtttctgcgatccgtcatccgtgtttgagtcggttttaattttatgttctgattttaatctatatatcttctctatctctatctctactattataaaaattgaagatgtttttgctggtattttggtacgtcatgcgtgtatgagtcggtttttaaattcgtttgcttttaaaaatatatatccgtatttgagtcggttttcaagattgtttacttttggtaatacagaaggaattatataagaaatatgtttaaaaaaactcgcatgttaacttgagacgatcgaactcctaactgtagctcatgattatatatatatatatatatatacatatatatatatacaagtgatctcccacagtgaattttatcttaactaaaccatataacaataataagattaaaatagacttcacacgttgcaacgcatgggtattttttctagttattataaaaattgaagatgtttttgccggtattttggtgcgtcatcgtgtatgagtcggtttttaagttcgtttgcttttggaaatacatatccatgtttgagtcggtttttaagatcgttcacttttcgtaatacggaaggaatcatataagaaatctatttaaaaaaactcgcatgctaacttgggatgatcggattcctaactacagctcatgattttctaaaaatatatttatccaagcgaactctcacagtgaatttcatcttaactaaaccatataacaataagaagattaaaatagacttcacccgggtattttttctagtctaagaaaaaaaaagaagactaagctccacttttcttctatatccttttttcaaacctgccttggcacatcccgttaaattcaatactccctccgttccaaggcaacatatcctattcacacaggccctcaagtgtatacacatgcacaccaactaaaaaatgtcaccaaaaaatctagaaaaaatcatacacatactttcaattgtattacacctagggttaaaatcttaacgtcaaattcattatattttagccgtaacaaagaaaaaatctgacagttttaaggttgctattttgtcagaattttatcttttttgttattctctatgtagaatgaatttgaagatgcgactttgcacgtagatgtaatactattgaaagtacatgtataaattttcctagaattttttgtgataatttttagttggtgtacacggtgtgtacacgcgaaggcctgtgtgcataggatacgctcccccgttccaaaatataagagcctataactggatgggatatttcctctgttctgattcgtagtattaagaaatatcctatctggtcctagattcttatattttaatcgtaccggacaaacttgttgttattgacttctcctaaagttttctcgggcgggatataattgcttgctgggggagtccgaaatttcaatcactggtcggcccgccgagcagtgatcaaaatcccctgaaaatctaacaagtgatggtcatctgtttcagatggtgatcaacctgtatgggtgcaacatgaacaagaaggagtgggagtcgccggaggagtgggcgccggagaggttcgccggtgggaggttcaaggtggcggacatgtacaagacgatggcgttcggcgccgggaggagggtctgcgcagggagcctgcaggcgactcacatcgcgtgcgccgccatcgcgcgcttcgtgcaggagtttgggtggaggctgagggagggtgacgaggagaaggtggacaccgtgcagctcaccgcctacaagctccacccgcttcatgtccacctcacgcccagaggaaggatgtgaaccattatattcattggaagctgttgctcgttgaataatgatatatagttatctttgagatgtatttactattagcaaaatctccatgctttgttctggataggagaaaacatattataatatatcgtggaatatttttttta</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0569900, RefSeq:Os06g0569900