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| Line 20: |
Line 20: |
| | | | |
| | ==Structured Information== | | ==Structured Information== |
| − | {{JaponicaGene|
| + | [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 1]] |
| − | GeneName = Os01g0208600|
| |
| − | Description = Actin-binding WH2 domain containing protein|
| |
| − | Version = NM_001185298.1 GI:297719730 GeneID:9268854|
| |
| − | Length = 7527 bp|
| |
| − | Definition = Oryza sativa Japonica Group Os01g0208600, complete gene.|
| |
| − | Source = Oryza sativa Japonica Group
| |
| − | | |
| − | ORGANISM Oryza sativa Japonica Group
| |
| − | Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
| |
| − | Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
| |
| − | clade; Ehrhartoideae; Oryzeae; Oryza.
| |
| − | |
| |
| − | Chromosome = [[:category:Japonica Chromosome 1|Chromosome 1]]|
| |
| − | AP = Chromosome 1:5889585..5897111|
| |
| − | CDS = 5889905..5890116,5891090..5891253,5891735..5891858,5891921..5892053,5892609..5892712<br>,5892847..5895760,5895856..5895945,5896231..5896335,5896613..5896720<br>,5896806..5896856|
| |
| − | GCID = <gbrowseImage1>
| |
| − | name=NC_008394:5889585..5897111
| |
| − | source=RiceChromosome01
| |
| − | preset=GeneLocation
| |
| − | </gbrowseImage1>|
| |
| − | GSID = <gbrowseImage2>
| |
| − | name=NC_008394:5889585..5897111
| |
| − | source=RiceChromosome01
| |
| − | preset=GeneLocation
| |
| − | </gbrowseImage2>|
| |
| − | CDNA = <cdnaseq>atgccgctggtgaggttcgaggtgcggaatgaggtggggcttggggaccccgacctgtacggcggcggcggcggtggaggaggaggaggaggaggaggaggagttggggctgctgcgaagaagggcggggaggcggagcccaaggcgctgctcgagggcgtcgccgtcgccggtctcgtcgggatcctgcgccagctcggagatctcgcggaatttgcagcagatgtttttcacgacttacatgagcaagttataactacatctgctagggggcgcaaggtgctgactcgagtacagaacatcgaggcagcacttccatctcttgaaaaagctgtcaagaatcagaagagccatatacatttcacttatgtaccaggctctgattggcatgcacaacttaaagatgagcaaaatcacctgctttctagtgatctacctcgatttatgatggattcctatgaagaatgtcgagacccaccacgactttaccttcttgataaatttgataatgctggagctggggcttgttcgaggagacattctgatccatcatacttcaagaaagcatgggatatgatgagagcagacaagacaggaaatttccaaagagaaaagaaatctcagaaaatcaagagaaaaggatcacgcttgagagaaccgtatcacggacaaactacacccaggcagaggaatggtgaattgcagcgagcactcaccgctgttcagcttaccagcaggcactttgcgactcctagtactgatggccggagcctttcagagaatagatctacatctgatgtaagatctaaccctgacaatataagcagatcttcttcgtttagttcgaaagcacgactgagtttcacagagcaagttctagatacaaagccaactgtagttcctcatgaaaatggccatgacaagctgtcaaataataatctacacaagcttagcaatacccccttgcacacacggcttaacggtaccagtgcagatgacctgggtgatgatttgaagcaaagttccctgctagatgatatgactgctaggtcaccttctgttaaatgggatgagaaggctgaaattaccatgtctacaacttccgtctactgtgatgatgttgtcatggacaaggctgaacatgtacaatctaaatgtattagccctgagcagcaagaaatcgaccatagggagatggagactttggagcagcaagaggcattacatcaaaaggcaaaacagttattagtgtcatcaggcttgaaccaccatgatgaagtccccagtgaaacagacaactatgtggatgcacttaatacacttgaatctgagacagagactgaacccgagcttcaaactaaaagtcgagtgaaaccagtaccttctctcaatgttgatgtgcctcaggtggagctgatagataacattgtcacagagtctcctgattcttctgttgctgaattccctgatgcatatcaaaattcaagtatgcctcctgctcctgagagcgcagctgattttcccagtttgtcaagtgcagatgctcctgacatttcagagccagtattatcaggctatacagctaatcctcatcctgaagtgtcagctattgctactaatacccctgtgagcaatacagaggatgctccaggtcctttagagatttcagagtcagcatcacgagcctatataattacacttcctaatcaaagtttacctgattccaaagaaattccagacagtaaggcagaagatgcacccatagattctcctgagaaattggaaccaggaccttcaagctatacacctacaattcccattaaagagtcctctattgtcagtcaaaatactaatgcagaaaatgtttccggagactgtagtgaaggcactgcttgtgctatatcctattcccagcatatcatttctgataagccaactaatgaggtatctgctactaatagctcacctgatgatacctctagcgatgaagatacagttgaaagtggtggcattgttgaagtgtctaattcacagcccatgccactgaatgactcattggagaacggatgtgcaactcaaggcctcccagcaaatgcccctactaattctactggagtatcttctgttaagctctggactaatgctgggctctttggacttgagccatctaaacctccagtattcggtgcccatgatggtccaaaggaggatactacacctggacacacacaacctcagctttgccattcaactgggtgccccgaagttcatttttcaaagcccactgaatcagcacaagtatatgttccaaatggcaattcgccaattaccagcagttttgtggggaaacttgttggtatctgtcctggttctacaagccacagctcagagactaatcaatcaacagtaagaacacctgatactgttattggtcaaacagaggggtccacaggttgttccacatcttttgagcacagtgatcacaaaaatattattggtaagcaaacttcaataagtgagctcctagaatctgaagacagtgctgaaaatggtgctgaaatgttctctaaaactgacatgactggaaggaataacatgaatcaggtgtctgcatcaagcttttcaagcattgcacaaagatttcttgctaatacacttcagcgaagaactcccaaatacactgatcttcctatgtcatctgttatagttaacactgatgcaaacgggactgatgaatctacccaaatatcttctctagcccccaatgaaacaacattcgaggcatctcaatttgagaagaaaacagaaaatgacacaaatggactgcccaaatcgtcactcttctctagtagccattactctgagaaatcatctccgccgcttgagtacatgaaaatatctttccaccctatgagtgcatttgaaatgtcaaaattggacctagatttctctgatgaaaatcttcatgagaatgccgatgatatgatgttaccaacgtttcagttacttccagggtcttccgttccacagcttggtagtggttctgaatcggaagatgatacttttggcagatcttatagttattcttcgtatgatgatctaagtccacggttatattcaaactctgagttgtgggatcaagaagacgcaaatggattggaggatcatgatatgcataacaatccaaatcagataggatccttcggagcaccaatctctagctttgtggaatttgagcagatggacttatctggtgcgaagtccactgtatcacttacagatcttggggatgataatggacttggcacgttagattctcatcctgctggagaacttcctaacttcgatactttgatggctcatcaaaatgaggccttcattccgcacaatccagtaagtttatcaccagatgaaggtcagttgcctccacctcctcctcttcccccaatgcaatggaggacaatgagacaagtagcttctgtagaagaaggaagaggttctgcagctaaagaagatatgcttgagagtacctcagatctaccaccagtacacactcctgttcaggaagaacatcttctgcccatcgcaccaccagatcaacaaaatcttctgcccatcgcaccaccagatcaacaagggcatgcgaaggagaatgacagaaaagttgatggggtaaaagagataagcaatcctctcgacattgagatcagagcaagcttgcttcagcaaatcagggataagtcaggtcagcagaagctgaatggacatgaaaagtcaaaagcagtaggcaatgatactaaaaacttggatgaaagggaggagttgcttcaacaaatcaggagcaagacattcaatttaagacgaacaaatgcatctaagacaaacacctcatcaccaaccactgccaactccagcgttgtagcaatcttggaaaaggcaaatgcaatccgccaggctgtggccagtgatgagggaggtgatgatgatagttggagtgatatatga</cdnaseq>|
| |
| − | AA = <aaseq>MPLVRFEVRNEVGLGDPDLYGGGGGGGGGGGGGGVGAAAKKGGE AEPKALLEGVAVAGLVGILRQLGDLAEFAADVFHDLHEQVITTSARGRKVLTRVQNIE AALPSLEKAVKNQKSHIHFTYVPGSDWHAQLKDEQNHLLSSDLPRFMMDSYEECRDPP RLYLLDKFDNAGAGACSRRHSDPSYFKKAWDMMRADKTGNFQREKKSQKIKRKGSRLR EPYHGQTTPRQRNGELQRALTAVQLTSRHFATPSTDGRSLSENRSTSDVRSNPDNISR SSSFSSKARLSFTEQVLDTKPTVVPHENGHDKLSNNNLHKLSNTPLHTRLNGTSADDL GDDLKQSSLLDDMTARSPSVKWDEKAEITMSTTSVYCDDVVMDKAEHVQSKCISPEQQ EIDHREMETLEQQEALHQKAKQLLVSSGLNHHDEVPSETDNYVDALNTLESETETEPE LQTKSRVKPVPSLNVDVPQVELIDNIVTESPDSSVAEFPDAYQNSSMPPAPESAADFP SLSSADAPDISEPVLSGYTANPHPEVSAIATNTPVSNTEDAPGPLEISESASRAYIIT LPNQSLPDSKEIPDSKAEDAPIDSPEKLEPGPSSYTPTIPIKESSIVSQNTNAENVSG DCSEGTACAISYSQHIISDKPTNEVSATNSSPDDTSSDEDTVESGGIVEVSNSQPMPL NDSLENGCATQGLPANAPTNSTGVSSVKLWTNAGLFGLEPSKPPVFGAHDGPKEDTTP GHTQPQLCHSTGCPEVHFSKPTESAQVYVPNGNSPITSSFVGKLVGICPGSTSHSSET NQSTVRTPDTVIGQTEGSTGCSTSFEHSDHKNIIGKQTSISELLESEDSAENGAEMFS KTDMTGRNNMNQVSASSFSSIAQRFLANTLQRRTPKYTDLPMSSVIVNTDANGTDEST QISSLAPNETTFEASQFEKKTENDTNGLPKSSLFSSSHYSEKSSPPLEYMKISFHPMS AFEMSKLDLDFSDENLHENADDMMLPTFQLLPGSSVPQLGSGSESEDDTFGRSYSYSS YDDLSPRLYSNSELWDQEDANGLEDHDMHNNPNQIGSFGAPISSFVEFEQMDLSGAKS TVSLTDLGDDNGLGTLDSHPAGELPNFDTLMAHQNEAFIPHNPVSLSPDEGQLPPPPP LPPMQWRTMRQVASVEEGRGSAAKEDMLESTSDLPPVHTPVQEEHLLPIAPPDQQNLL PIAPPDQQGHAKENDRKVDGVKEISNPLDIEIRASLLQQIRDKSGQQKLNGHEKSKAV GNDTKNLDEREELLQQIRSKTFNLRRTNASKTNTSSPTTANSSVVAILEKANAIRQAV ASDEGGDDDSWSDI</aaseq>|
| |
| − | DNA = <dnaseqindica>321..532#1506..1669#2151..2274#2337..2469#3025..3128#3263..6176#6272..6361#6647..6751#7029..7136#7222..7272#actttacacccccctcgcctccccgtccctttcgcccagcaccttgtcggagaccgacgcgcctccgcccgctcgatcgatcgaagtcggcgtcgctcgcctccactgctgctgctgctactcctcgcgccccttccttccttgcggaggcggcaacctgtgacgccacgacaccaccgggggagagctaccggagtcggcgggcgcaccggctcccaccaccaccgggggaaaagtagccgttgcggcgtcgccttttttattgttgtaggatgaggggtgccgctcggcggtgaggtggaggtggaggtgggtgggagatgccgctggtgaggttcgaggtgcggaatgaggtggggcttggggaccccgacctgtacggcggcggcggcggtggaggaggaggaggaggaggaggaggagttggggctgctgcgaagaagggcggggaggcggagcccaaggcgctgctcgagggcgtcgccgtcgccggtctcgtcgggatcctgcgccagctcggagatctcgcggagtaagcgcccccacattacttctcaccctctctccttggcgctgtgattcaggcgagattcgagttgccgcgtgagtttgtggctccagcgcgggatctggtgcgcttcgtgtgtgatgatttcggcgagccgctgcagttccggggggaagtttcgcgcttgttcgggagtggtggtgtgtgttggtttgtgcataggattggggtgatgagaagaagggggatctggggttgaggttggatttgatgagacgagtggcacgctgggttttaggaattagagtaggatttcggtctgttggttatcgagaaattttgcggagctgcctgtccagaactggatatgtgtctgggatctctttctagggttggatgcgttttaggagtgggaaatggctgaccaatgtggttttttgccgcatttgctttgttcgggtttcatgctttggtgaattgatcgaaactgtttatgtattttgagtatctcactgtggttttcagtaagatcttgtgttagcatgggggtaataggttatgctttggaaaatttcccttttgtttttggatgacatcgccggtaattctgaaattttccttttccatcagttagtctaaggggtgattggatgcatttgggttttgggatagatgttattgaatgtctttgctacttctggcttgaggatttcaagggctgttggcaatttccattgcttgttgatgaaaagctcccaccatcattttggaagttgtttctggctattgatttacttttgaataccgccctacatccctacatacctgcctgcttttactatgtttctttctttttattaccgctatatgtttcttaaccgtgtctggtaaaaattgaagtgctggctattagttgggttcgactatgttgtgagccctctattttcatgtaatcgtttagtttactatggctaaatagatattttggtcttaccagatttgcagcagatgtttttcacgacttacatgagcaagttataactacatctgctagggggcgcaaggtgctgactcgagtacagaacatcgaggcagcacttccatctcttgaaaaagctgtcaagaatcagaagagccatatacatttcacttatgtaccaggtacataccgtatcagtgtcaatatatcatgaccaggagtataaaagaaaccatgctaagggttcctatgaatatttaaattgtcaacaaccatcttaaccaattacttgtcactgatttgcccacaaacccatcagaatgcactgaaactagttgaagtaacctgatgttgtgcatgaggtccatagtagtttatcacaaaatgccaacctgaaaaatggccaaacccataaggaacttccaattgaagttggtggtgtcgctaaattgctatagacctttttggcggtaagttaacctagccgtatgatgctagagctgctctggttgttggtaatgaattaaactttagttttactgttactagatctacacggtacaaagtcagatgctgtctcatacttgaacgtcacttgctctcaccgaataatttggtttaagatggtctcacagttttgttgaatgtgctggtaaaatgcaggctctgattggcatgcacaacttaaagatgagcaaaatcacctgctttctagtgatctacctcgatttatgatggattcctatgaagaatgtcgagacccaccacgactttaccttcttgataagtaagacttgattgttttctttattgatgcgcttgtggttcctgaaatgttttgtcttttagatttgataatgctggagctggggcttgttcgaggagacattctgatccatcatacttcaagaaagcatgggatatgatgagagcagacaagacaggaaatttccaaagagaaaagaaatctcagaaaatcaaggttccgttattttactttctgcatttctgcatcagaggatcagtggcatgcttgtctatcttagcaacagacacatttaatggtagttaatatgtataattatggtattgctgctccactgtactctacaggcaaacatatcaaactggtactatcatgttatgatttaaactcaatgattagaaatcaccatacctagctcgtgtcaagatttggcagaagtctgaatgttgtccttatgaagagataggaaatagttatttagagtcaccaaactttgttactggttaataatctcgtgggaacaagaaataaccatttccatgaatacattcatgtgctaaaatatttgaaactcattttctatggtcatattctgcttgagcctctgagtgaatgtttaggaattgctagatgtgttactgaactatcatccatagctgtttctgatatggaacggctgtagctaattgaagttagaatggcaattgtaatcttttatcatgttggtaaatatgtggtgaaagacttaataaatcttttgaacttggacagagaaaaggatcacgcttgagagaaccgtatcacggacaaactacacccaggcagaggaatggtgaattgcagcgagcactcaccgctgttcagcttaccagcaggtgcaacacaaatcccaaatttgaagagacataaattgcatatccttgtcaccttctcctccatgactatttttcttgtagtatttagttcatgcatctcgaacagccttattagtaatgtgttttgtcagcaggcactttgcgactcctagtactgatggccggagcctttcagagaatagatctacatctgatgtaagatctaaccctgacaatataagcagatcttcttcgtttagttcgaaagcacgactgagtttcacagagcaagttctagatacaaagccaactgtagttcctcatgaaaatggccatgacaagctgtcaaataataatctacacaagcttagcaatacccccttgcacacacggcttaacggtaccagtgcagatgacctgggtgatgatttgaagcaaagttccctgctagatgatatgactgctaggtcaccttctgttaaatgggatgagaaggctgaaattaccatgtctacaacttccgtctactgtgatgatgttgtcatggacaaggctgaacatgtacaatctaaatgtattagccctgagcagcaagaaatcgaccatagggagatggagactttggagcagcaagaggcattacatcaaaaggcaaaacagttattagtgtcatcaggcttgaaccaccatgatgaagtccccagtgaaacagacaactatgtggatgcacttaatacacttgaatctgagacagagactgaacccgagcttcaaactaaaagtcgagtgaaaccagtaccttctctcaatgttgatgtgcctcaggtggagctgatagataacattgtcacagagtctcctgattcttctgttgctgaattccctgatgcatatcaaaattcaagtatgcctcctgctcctgagagcgcagctgattttcccagtttgtcaagtgcagatgctcctgacatttcagagccagtattatcaggctatacagctaatcctcatcctgaagtgtcagctattgctactaatacccctgtgagcaatacagaggatgctccaggtcctttagagatttcagagtcagcatcacgagcctatataattacacttcctaatcaaagtttacctgattccaaagaaattccagacagtaaggcagaagatgcacccatagattctcctgagaaattggaaccaggaccttcaagctatacacctacaattcccattaaagagtcctctattgtcagtcaaaatactaatgcagaaaatgtttccggagactgtagtgaaggcactgcttgtgctatatcctattcccagcatatcatttctgataagccaactaatgaggtatctgctactaatagctcacctgatgatacctctagcgatgaagatacagttgaaagtggtggcattgttgaagtgtctaattcacagcccatgccactgaatgactcattggagaacggatgtgcaactcaaggcctcccagcaaatgcccctactaattctactggagtatcttctgttaagctctggactaatgctgggctctttggacttgagccatctaaacctccagtattcggtgcccatgatggtccaaaggaggatactacacctggacacacacaacctcagctttgccattcaactgggtgccccgaagttcatttttcaaagcccactgaatcagcacaagtatatgttccaaatggcaattcgccaattaccagcagttttgtggggaaacttgttggtatctgtcctggttctacaagccacagctcagagactaatcaatcaacagtaagaacacctgatactgttattggtcaaacagaggggtccacaggttgttccacatcttttgagcacagtgatcacaaaaatattattggtaagcaaacttcaataagtgagctcctagaatctgaagacagtgctgaaaatggtgctgaaatgttctctaaaactgacatgactggaaggaataacatgaatcaggtgtctgcatcaagcttttcaagcattgcacaaagatttcttgctaatacacttcagcgaagaactcccaaatacactgatcttcctatgtcatctgttatagttaacactgatgcaaacgggactgatgaatctacccaaatatcttctctagcccccaatgaaacaacattcgaggcatctcaatttgagaagaaaacagaaaatgacacaaatggactgcccaaatcgtcactcttctctagtagccattactctgagaaatcatctccgccgcttgagtacatgaaaatatctttccaccctatgagtgcatttgaaatgtcaaaattggacctagatttctctgatgaaaatcttcatgagaatgccgatgatatgatgttaccaacgtttcagttacttccagggtcttccgttccacagcttggtagtggttctgaatcggaagatgatacttttggcagatcttatagttattcttcgtatgatgatctaagtccacggttatattcaaactctgagttgtgggatcaagaagacgcaaatggattggaggatcatgatatgcataacaatccaaatcagataggatccttcggagcaccaatctctagctttgtggaatttgagcagatggacttatctggtgcgaagtccactgtatcacttacagatcttggggatgataatggacttggcacgttagattctcatcctgctggagaacttcctaacttcgatactttgatggctcatcaaaatgaggccttcattccgcacaatccagtaagtttatcaccagatgaaggtcagttgcctccacctcctcctcttcccccaatgcaatggaggacaatgagacaagtagcttctgtagaagaaggaagaggttctgcagctaaagaagatatgcttgagagtacctcagatctaccaccagtacacactcctgttcaggaagaacatcttctgcccatcgcaccaccagatcaacaaaatcttctgcccatcgcaccaccagatcaacaagggcatgcgaaggaggtagtatgtctcatctttaattgactctattttgaataattctgtatcaataatcactgtcttttattaatgattcattaacttgacttatgcagaatgacagaaaagttgatggggtaaaagagataagcaatcctctcgacattgagatcagagcaagcttgcttcagcaaatcagggataaggtttgcttcattctttcttaaaaaaaaaatctgttgttctctattgtttcatagttttgttactcttttgtgttgaaacctgagcaattttagaatttttagttacgaacagatagcaccagagtatcatgtgacaatatatcatggaggctctgtgccttcttcttttgccaatacaaatatttttttttctgatggttgttatttgattcttgaacttgaaagctagttagcaaatttttggcattcaatactgatatttttgttcattttaataacttgcagtcaggtcagcagaagctgaatggacatgaaaagtcaaaagcagtaggcaatgatactaaaaacttggatgaaagggaggagttgcttcaacaaatcaggagcaaggtatttccattatctgccctattgtacttgtgtagtataatgctacctgacaggtctttatgttaagttttcttgatccatgcctagtcgacagacttgcagttgaaacacgatacactagaacacccacattgagggcccatctctctcaaccaaaccataaacacacaataagaaggctaaataactacttagtttgttactatgctcgtatgatgcatacagtcatctcagaaaataactgtagctagtttgctaatatgttcacatgatgcagacattcaatttaagacgaacaaatgcatctaagacaaacacctcatcaccaaccactgccaactccagcgttgtagcaatcttggaaaaggcaaatgcaatccgccaggtttgtattgattctttttttccccttgatgttagtttatgcgctactttccttacgttttccctgattgtttccatgctatcaggctgtggccagtgatgagggaggtgatgatgatagttggagtgatatatgaatactcaactggaacgcgtatgaaactctttttctgtatattcagctagtacaagatgaagtgaaaaaatgtgaataacatccttttcttcattgtaattagattttccaggtctgttttgtacctctttttagttcacattagtgtattctctcataggcccatgcggttgtggaaatggttagatcattttcacattatgtaaattaactttattatttatttttgatagtgaaattaactggtaaaataagc</dnaseqindica>|
| |
| − | Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001185298.1 RefSeq:Os01g0208600]|
| |
| − | }}
| |
| − | [[Category:Genes]] | |
| − | [[Category:Japonica mRNA]]
| |
| − | [[Category:Oryza Sativa Japonica Group]] | |
| − | [[Category:Japonica Genes]] | |
| − | [[Category:Japonica Chromosome 1]]
| |
| − | [[Category:Chromosome 1]]
| |
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Annotated Information
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Expression
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Structured Information
