|
|
| Line 20: |
Line 20: |
| | | | |
| | ==Structured Information== | | ==Structured Information== |
| − | {{JaponicaGene|
| + | [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 1]] |
| − | GeneName = Os01g0259400|
| |
| − | Description = Protein kinase-like domain containing protein|
| |
| − | Version = NM_001049174.1 GI:115435761 GeneID:4326239|
| |
| − | Length = 7800 bp|
| |
| − | Definition = Oryza sativa Japonica Group Os01g0259400, complete gene.|
| |
| − | Source = Oryza sativa Japonica Group
| |
| − | | |
| − | ORGANISM Oryza sativa Japonica Group
| |
| − | Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
| |
| − | Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
| |
| − | clade; Ehrhartoideae; Oryzeae; Oryza.
| |
| − | |
| |
| − | Chromosome = [[:category:Japonica Chromosome 1|Chromosome 1]]|
| |
| − | AP = Chromosome 1:8690809..8698608|
| |
| − | CDS = 8691292..8692410,8692620..8693489,8694502..8696085,8696179..8696238,8696316..8696394<br>,8696474..8696535,8697109..8697184,8697347..8697399,8698161..8698250<br>,8698391..8698438|
| |
| − | GCID = <gbrowseImage1>
| |
| − | name=NC_008394:8690809..8698608
| |
| − | source=RiceChromosome01
| |
| − | preset=GeneLocation
| |
| − | </gbrowseImage1>|
| |
| − | GSID = <gbrowseImage2>
| |
| − | name=NC_008394:8690809..8698608
| |
| − | source=RiceChromosome01
| |
| − | preset=GeneLocation
| |
| − | </gbrowseImage2>|
| |
| − | CDNA = <cdnaseq>atgaacaacttccacgtctacgaggccatcggccgcggcaagcactcgacggtgtacaaggggcggaagaagaagagcatcgagtacttcgccgtcaagagcgtcgacaagtcgcagcggtccaaggtcctcaatgaggtccgaatgcttcattccttagatcatccgaatgttctgaaattttactcatggtacgaaacctcagctcatttttggttaatactggagtactgcgttggtggagacctaaagggcttgcttgagcaggataagaagctgcctgaaaattctatacatgacttggcttatgatcttgtgaaagctcttcagttcttgcattcacaaggaattatatattgtgatctgaaaccatcaaatgttttacttgatgaatctgggtgcatgaagctgtgcgattttggattagcaaggcgtttgaaagacatagagaagaccaatcctggagatgtgccgcaacctttgaaggggactccatgttatatggctcctgagttgttccaagagggaggagtgcattcatatgcttcagatttctgggcacttggttgtgtattgtatgaatgctattcaggaaggcccccttttgtggctaatgaatttacccagctagtcaaatctataatttcagatcctacaccacctttgcctgataacccctcaagatcctttcaaaatctgatcaattgcttactcatgaaagatcctgctgaaagattacagtggtctgaactatgcgagcatcacttttggaggagcagaatgtcaattattcctttacctcctcagcctgcctttgacaacatggtcgacctttctgctacaccatatttagttgagagaaatggtgataaaccttctagacagtccacaccacccaagccccgtgatggcctacggaagaaggacgaaaattctgctaaggtgttcacccctgttaagaatatgctaagtggtaagaaaaacaatgcaaaaccttcctgtaaggctgatggattgaagggtgtaaatatcctcaggatgtctcgtgtagctaagaggaatttgcagagagaaaaagacaaggagaactacaggcgacaccctacagaagcttctgagaatgatacagaagttaagattgaaaacaatgatatggaacttgattttggtgaaaatccagaaggtgatgcacctgatgacaatgatggatcagacaatcctggatccgcagaagatgaaaaactttccactcaaggcactgatggtaatgaagagaactgcatgagtaatcagatggatatgctcacagatgaaggcccagttaaggctgaaaccatgataaaaactgaacataattgttcagaaaatcttgatgtggtggccactccaccaagtatttgtatgaggaaagcacaacgagcaaagacaacttcaggtgccgcagctggttccgagccatctgacatctctgcagcattctggcatccaacagatcttgctgttaaaccagttatgcctggtaggaaaggagataaagctgtagagacagtccctatgcttccgtttgaagctcttcctgctgttgattatattaagttgccacgggaacaaatgaatgcattcaatagtcagatacttcagagtttaagtggtacttttcaggtttcagagaaacagaatatcatcaaatacctggagatgttaagcatcaattctgatgctgcaaatataatcacaaatggtccaattatgctgttgcttataaaaatgctccgtctgtcaaaaacttcagtattgcgtgtccaaattgcttcacttatgggattgttgatacgctactccactatccttgatatagagctggcaagttcagggatttttaatgcactatcagatggtctaagggacaagcatgataaactcaggcgattctgtatggcaacactaggagaattactgttctacatttctactcaatctgatcaagataccaaagaaatcaatgcccaagaatcccctttgaaggataacagggccacagcttcttggcaggttccaagttctgtaattgcgctggtgtcatcaatcttgcgtaaaggtgaagatgatctagcccagctttatgctttacgaaccattgataacatctgtagccaagggacagattggacttcacgtttcgcttcccaagatgtaatcagtcacctgtgctacatctatagagcaactggtaagcaggagaatacaagacttattgcaggatcttgtttggcacgcttagctcgcttcagctcatcttgtattcatttaatactggagaggctggccttcaaggatatcgcatgcacactcattaaaggcaattcacgtgagcagcagatcagtttgaatcttctgaattcagcactagttaacagccaaatcataccaaccatgaaccgctacattcagtcgttaacagaagagaagcagttggttcctggactcatctctcttattgaacagggaactgatgttctgcgtggcaaaacccttctatttgttgctcttctttgcaagaacagtcgaagatggcttcctcatttcttttgcaatgcaaaactactatcagcagttgatagattgggaaaggagaaggaaggcttcattcatcaatgcacagaagcatttgtgcagttggttgcttcattggtcccaggcatccttgacactgtctctagtgatatacaacaggttatgggaggcaagcgtcatggagctgctactgctttaactggacgagctcatccaaagagcataattcatttgtttcctgttatccttcatcttcttgggagtgtttcattcaatcacagagttgtgacgagccatgtattgcttcagttggcaaatcttatgaaaattttggaagcaccatttcaggctcgggatgattttcaaatgacactattgagggttcttgaggcagccacggaggagccttctgttatacttaatgaacacaaaatattcacaagtcgaatccttccaagcttatccgtcttgtacaagggcaataaagatggtgatgccagattcctatgtttaaagatactgtccgatgtgatgattgtgatcttcagtgactcttcattgacgtctaatgagcaaacagtatctgacctggaaaagatctctcagaagtattttctccccatgtatccatcatttgcagaggatgaagatccaatacctatatatgcccagaaacttctggtaatgctgatggagcatgattatgttaaggtttctgatattctcaatgaagcaacagtatcccggtgctttgaatttttgctaggagatttgtctaatgcaaatgtaagtaatgtcaagctttgctttgcattggcatctgctcccgatatggacaccgacattctttctcagcttcaagttgtcagaagaatagggaacctgctggagtttgtgactgcaaaagatatggatgattttctagaaccaaccttggaactttgcagagcattcattatccggggcatcagcagtgacaaaattgtggccctttccaaagagcccgcactccttgttgatagtgccttcagcatgagcattgctgtcgatcaacaatcatgcgtcatggatatatgcgactttggtggcaacatgggcattttcctcgacctagttggaagttcagatccacatataagcgatttggcatcagactgcttggtgctgttactcaaagcagcacctcgggaggctacggtgggcttgctgaccaatcttcctaaactgagcgttgttctggacctgctgaagcatggcacctgcctaaggctgactcgcctgctgtattgcctggccttctcctgcaggcaatatctagcgcaaggaatgatcgtgtcgatatctttgtcagccttgatgcgagtagaagcactcgtgtcggcattcaagggttcacatgatggctgccttgctgacgccgcctcatatttgggcgctgaactgcagcgtttacctcgctgtggttga</cdnaseq>|
| |
| − | AA = <aaseq>MNNFHVYEAIGRGKHSTVYKGRKKKSIEYFAVKSVDKSQRSKVL NEVRMLHSLDHPNVLKFYSWYETSAHFWLILEYCVGGDLKGLLEQDKKLPENSIHDLA YDLVKALQFLHSQGIIYCDLKPSNVLLDESGCMKLCDFGLARRLKDIEKTNPGDVPQP LKGTPCYMAPELFQEGGVHSYASDFWALGCVLYECYSGRPPFVANEFTQLVKSIISDP TPPLPDNPSRSFQNLINCLLMKDPAERLQWSELCEHHFWRSRMSIIPLPPQPAFDNMV DLSATPYLVERNGDKPSRQSTPPKPRDGLRKKDENSAKVFTPVKNMLSGKKNNAKPSC KADGLKGVNILRMSRVAKRNLQREKDKENYRRHPTEASENDTEVKIENNDMELDFGEN PEGDAPDDNDGSDNPGSAEDEKLSTQGTDGNEENCMSNQMDMLTDEGPVKAETMIKTE HNCSENLDVVATPPSICMRKAQRAKTTSGAAAGSEPSDISAAFWHPTDLAVKPVMPGR KGDKAVETVPMLPFEALPAVDYIKLPREQMNAFNSQILQSLSGTFQVSEKQNIIKYLE MLSINSDAANIITNGPIMLLLIKMLRLSKTSVLRVQIASLMGLLIRYSTILDIELASS GIFNALSDGLRDKHDKLRRFCMATLGELLFYISTQSDQDTKEINAQESPLKDNRATAS WQVPSSVIALVSSILRKGEDDLAQLYALRTIDNICSQGTDWTSRFASQDVISHLCYIY RATGKQENTRLIAGSCLARLARFSSSCIHLILERLAFKDIACTLIKGNSREQQISLNL LNSALVNSQIIPTMNRYIQSLTEEKQLVPGLISLIEQGTDVLRGKTLLFVALLCKNSR RWLPHFFCNAKLLSAVDRLGKEKEGFIHQCTEAFVQLVASLVPGILDTVSSDIQQVMG GKRHGAATALTGRAHPKSIIHLFPVILHLLGSVSFNHRVVTSHVLLQLANLMKILEAP FQARDDFQMTLLRVLEAATEEPSVILNEHKIFTSRILPSLSVLYKGNKDGDARFLCLK ILSDVMIVIFSDSSLTSNEQTVSDLEKISQKYFLPMYPSFAEDEDPIPIYAQKLLVML MEHDYVKVSDILNEATVSRCFEFLLGDLSNANVSNVKLCFALASAPDMDTDILSQLQV VRRIGNLLEFVTAKDMDDFLEPTLELCRAFIIRGISSDKIVALSKEPALLVDSAFSMS IAVDQQSCVMDICDFGGNMGIFLDLVGSSDPHISDLASDCLVLLLKAAPREATVGLLT NLPKLSVVLDLLKHGTCLRLTRLLYCLAFSCRQYLAQGMIVSISLSALMRVEALVSAF KGSHDGCLADAASYLGAELQRLPRCG</aaseq>|
| |
| − | DNA = <dnaseqindica>6199..7317#5120..5989#2524..4107#2371..2430#2215..2293#2074..2135#1425..1500#1210..1262#359..448#171..218#gagcgccaatctcaaatcgaaatcccgctctctctctctctctctctctccccccccattcctccgcctcaaatcgcaaaccctagccgtcgccgtcgacgagaggtcgacgagaagtcgacgagaagaggaggaggagaagctgctgctggtggtggtggtgctccgccatgaacaacttccacgtctacgaggccatcggccgcggcaagcactcggtaacccccctctccgccttcctctcctcgtcttccctgtgttccccgcgcccccggatccgctcggattgggtgcagatgggtgagatttctgatttgtttttggtgtttttttttttttgggtgcggtggtccggaagacggtgtacaaggggcggaagaagaagagcatcgagtacttcgccgtcaagagcgtcgacaagtcgcagcggtccaaggtcctcaatgaggtgagcgcggcgccgtcgtctccctgctctttcatcagtagtagctggtaggcatgcgccgccgcgattttgggtggggatattttgaatcggagggcttggctcctggcgggcctggttaatttggtccgtgaaatggtccttggagtgatttgatctgcgggtgcctatggatttcccggaagcaaatcgtgatatgatatccaagattgatttgatagtttaagtgactgttttagactgtgtggataccgtggctttcgttaaccgctgttttctgggcatgcagagtgcagagtttccttgtaagctgatgttgtttaaatgggcagaatgttacattgttcgttatatagtatcttgatgtactagtggatcgctatttatttcctgggaaaaagcactttacatgcttaagctgggatgctgtttagattttgatttcctgataatcgtgcgaaacaatctatttcttatagccatttctagagaagatgaaatgaggcaacataagttacatttggtgtgctgtcaaatgttatgttatttggtcaggaatgtaccttctctttgagcaaagcgcttaagggtgaagatcagtagtttagataatattttctggatagaagatgagcacatgttctagtcttcaattaaaaaataatcttttagctagcatggtaagaaaaatagttaatgagcctgaggaatgaggatgtttgcttactccactaatagtacttctgaacttttctttgcaggtccgaatgcttcattccttagatcatccgaatgttctgaaattttactcatggtacgtttctaggggactagtgttgtggtgcaataatggcaagcagttcactttttagaacaataatgacaagtatagtctggcagtttggttgcaatcatcgttattgttcccttaacattgtactacaaaccatacttatgcctgtacctgttgtaccaggtacgaaacctcagctcatttttggttaatactggagtactgcgttggtggagacctaaagggcttgcttgagcaggtatctcgcttgtcagtttaagcagcataccattttctagttcaaagcacgctgtcagctgtttacttgtacaatagcacacgtttgtatttgatttgcatttgcttcatttacaaatatttctctctctctctctctctgtgcatgctgagatgtcttttgtttgctccttaagaaattttttaaaaaaacatgttcattttttttagcttatagctggtactccttccatcccaaaatataacaacttcttcacctacattctcttcttaaccaatcacaaccttcccccatttaatttctctatttactttcttttctcaaccaatcacagcctcccctccccctcaatcttcatacgggcttaaccctaaaacttcttatattttgggatggaggtagtagaatggaaggaaaattcattgtcaaactgacaggttaaaaacttttgctttggctgtctatttatgtacatgtcacatttaagtatgctctaatatgtacccaaatttttagtattttgtgttagtatatttgcatatgaacattttacatttcttcaatgacctgcaggataagaagctgcctgaaaattctatacatgacttggcttatgatcttgtgaaagctcttcagtaaagtttctttccttgtttcattatttctactgtatgatgtgtgaaatcttatttgtcaaaacaatttggactttaggttcttgcattcacaaggaattatatattgtgatctgaaaccatcaaatgttttacttgatgaatctgggtgcatgaaggtacttactggatcaaataattcatacagtgaggcaatagcttgtaactaacgatatatatttctttaattttctagctgtgcgattttggattagcaaggcgtttgaaagacatagagaagaccaatcctggagatgtgagcttccattttccttttgtatctcatttcatttccttgtgtttccatctacatttgattattttcccagcttaatttctcctcgtgtaggtgccgcaacctttgaaggggactccatgttatatggctcctgagttgttccaagagggaggagtgcattcatatgcttcagatttctgggcacttggttgtgtattgtatgaatgctattcaggaaggcccccttttgtggctaatgaatttacccagctagtcaaatctataatttcagatcctacaccacctttgcctgataacccctcaagatcctttcaaaatctgatcaattgcttactcatgaaagatcctgctgaaagattacagtggtctgaactatgcgagcatcacttttggaggagcagaatgtcaattattcctttacctcctcagcctgcctttgacaacatggtcgacctttctgctacaccatatttagttgagagaaatggtgataaaccttctagacagtccacaccacccaagccccgtgatggcctacggaagaaggacgaaaattctgctaaggtgttcacccctgttaagaatatgctaagtggtaagaaaaacaatgcaaaaccttcctgtaaggctgatggattgaagggtgtaaatatcctcaggatgtctcgtgtagctaagaggaatttgcagagagaaaaagacaaggagaactacaggcgacaccctacagaagcttctgagaatgatacagaagttaagattgaaaacaatgatatggaacttgattttggtgaaaatccagaaggtgatgcacctgatgacaatgatggatcagacaatcctggatccgcagaagatgaaaaactttccactcaaggcactgatggtaatgaagagaactgcatgagtaatcagatggatatgctcacagatgaaggcccagttaaggctgaaaccatgataaaaactgaacataattgttcagaaaatcttgatgtggtggccactccaccaagtatttgtatgaggaaagcacaacgagcaaagacaacttcaggtgccgcagctggttccgagccatctgacatctctgcagcattctggcatccaacagatcttgctgttaaaccagttatgcctggtaggaaaggagataaagctgtagagacagtccctatgcttccgtttgaagctcttcctgctgttgattatattaagttgccacgggaacaaatgaatgcattcaatagtcagatacttcagagtttaagtggtacttttcaggtttcagagaaacagaatatcatcaaatacctggagatgttaagcatcaattctgatgctgcaaatataatcacaaatggtccaattatgctgttgcttataaaaatgctccgtctgtcaaaaacttcagtattgcgtgtccaaattgcttcacttatgggattgttgatacgctactccactatccttgatatagagctggcaagttcagggatttttaatgcactatcagatggtctaagggacaagcatgataaactcaggcgattctgtatggcaacactaggagaattactgttctacatttctactcaatctgatcaagataccaaagaaatcaatgcccaagaatcccctttgaaggataacagggccacagcttcttggcaggtcagaaactcaaaatgatgagtatgttatgtctgcatgcttagtaatttatctgcatgttgttgggtcatatgcttaggctatcttatatagtaacctgcagttagaagatcaatggcaagttactggtgctagaaatatctaagagcttttactgattcaatctgattcctgcatggaacgtaggtgccttgctcactgtttatgttatgaagtggaagctccttttggcctcttatgtgtggcgcttgttgggaagtgttcttcgtgggaagggtcatttgaccctttctttgtaaatatttctctcttctcaatggaatgacgcttagttctgcgttttagaaaaaaaaagaagtggaagcttctttcagttgaaagtatatactgcattattgaatttttcacataaccacataatcacactgcccaccttcataactattactataatatatggactaaattatgtttatatacatgctcttttctttgattttgtgtctatgcacatgtttattgttagtcaaacctgtatgattttacagaaaaccacataccaatcctgttcaatggctagcctaatcaggagtgattcaaattacatctatccgttagttttagtgattgtatgtccatgaattgagggtggatctctttgtcaatttctgtttctgcaacttgataaccttgctctcacctataggttgaactttgcctctccaaagggcctgatgaacttaagggacataattccataccaattttctttcaagtgttttaacctgctttccttttaatgactatattcttgtatttgtggaaccatatataggtcagctatgtaatagtgttaatgaattaatgagacctttactttcatatcttactggtcaagtagtatatatatcatatatatatacatacatgtgaggaatccttttatcttgattcacaactatgacattaattattgtgttttattaatgattttactttgcaagttgtgcaggttccaagttctgtaattgcgctggtgtcatcaatcttgcgtaaaggtgaagatgatctagcccagctttatgctttacgaaccattgataacatctgtagccaagggacagattggacttcacgtttcgcttcccaagatgtaatcagtcacctgtgctacatctatagagcaactggtaagcaggagaatacaagacttattgcaggatcttgtttggcacgcttagctcgcttcagctcatcttgtattcatttaatactggagaggctggccttcaaggatatcgcatgcacactcattaaaggcaattcacgtgagcagcagatcagtttgaatcttctgaattcagcactagttaacagccaaatcataccaaccatgaaccgctacattcagtcgttaacagaagagaagcagttggttcctggactcatctctcttattgaacagggaactgatgttctgcgtggcaaaacccttctatttgttgctcttctttgcaagaacagtcgaagatggcttcctcatttcttttgcaatgcaaaactactatcagcagttgatagattgggaaaggagaaggaaggcttcattcatcaatgcacagaagcatttgtgcagttggttgcttcattggtcccaggcatccttgacactgtctctagtgatatacaacaggttatgggaggcaagcgtcatggagctgctactgctttaactggacgagctcatccaaagagcataattcatttgtttcctgttatccttcatcttcttgggagtgtttcattcaatcacagagttgtgacgagccatgtattgcttcagttggcaaatcttatgaaaattttggaagcaccatttcaggtatgatctaagaacttcacgcacggttatgccatgatgaaaaaacatgacgaccacattcattttgtaactgcacttaagtgtcaaatcaatcccatcctttgttttgatgctgcgctgtggctcttgccttaacagttttgcattactactgtattttttaacatatcttgaccttatctgattatttacgtgtcttatacatccaggctcgggatgattttcaaatgacactattgagggttcttgaggcagccacggaggagccttctgttatacttaatgaacacaaaatattcacaagtcgaatccttccaagcttatccgtcttgtacaagggcaataaagatggtgatgccagattcctatgtttaaagatactgtccgatgtgatgattgtgatcttcagtgactcttcattgacgtctaatgagcaaacagtatctgacctggaaaagatctctcagaagtattttctccccatgtatccatcatttgcagaggatgaagatccaatacctatatatgcccagaaacttctggtaatgctgatggagcatgattatgttaaggtttctgatattctcaatgaagcaacagtatcccggtgctttgaatttttgctaggagatttgtctaatgcaaatgtaagtaatgtcaagctttgctttgcattggcatctgctcccgatatggacaccgacattctttctcagcttcaagttgtcagaagaatagggaacctgctggagtttgtgactgcaaaagatatggatgattttctagaaccaaccttggaactttgcagagcattcattatccggggcatcagcagtgacaaaattgtggccctttccaaagagcccgcactccttgttgatagtgccttcagcatgagcattgctgtcgatcaacaatcatgcgtcatggatatatgcgactttggtggcaacatgggcattttcctcgacctagttggaagttcagatccacatataagcgatttggcatcagactgcttggtgctgttactcaaagcagcacctcgggaggctacggtgggcttgctgaccaatcttcctaaactgagcgttgttctggacctgctgaagcatggcacctgcctaaggctgactcgcctgctgtattgcctggccttctcctgcaggcaatatctagcgcaaggaatgatcgtgtcgatatctttgtcagccttgatgcgagtagaagcactcgtgtcggcattcaagggttcacatgatggctgccttgctgacgccgcctcatatttgggcgctgaactgcagcgtttacctcgctgtggttgagccgaagtttggtcaggtgctggcttggttggcattgtgcaagtgatgttcatagggatcataagagagggcctcagccttgtatttcttcaccgtttcttgcaccaagctatgatcatgggttctcaccatccgaagtgatgactgatgaaccatccgattggctgtgtgatcatttatctatatgcaacgtggagctgctgttctttcagtataccatttctggccaaatctggagaggcagcttgtggccaaaacccttcctgtatttcccctgtgccaattttggttggcgtttcatcggttttcagtttctcaccatgtaatgctgtagagtttcatagcccttaaaatcatgtatatttgtacactcccttttactttaccaagcaacggggtggaaatttattgttatgaatgcctgtaaagctctgtgaatctgtgaaccaacaggactatattggagcatggtgctatcaacct</dnaseqindica>|
| |
| − | Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001049174.1 RefSeq:Os01g0259400]|
| |
| − | }}
| |
| − | [[Category:Genes]] | |
| − | [[Category:Japonica mRNA]]
| |
| − | [[Category:Oryza Sativa Japonica Group]] | |
| − | [[Category:Japonica Genes]] | |
| − | [[Category:Japonica Chromosome 1]]
| |
| − | [[Category:Chromosome 1]]
| |
Please input one-sentence summary here.
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
