Difference between revisions of "Os09g0135700"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os09g0135700| Description = Putative tyrosine phosphatase family protein| Version = NM_001069175.1 GI:115478089 GeneID:4346470| Length = 5338 bp...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os09g0135700|
 
GeneName = Os09g0135700|

Revision as of 20:55, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os09g0135700

Description

Putative tyrosine phosphatase family protein

Version

NM_001069175.1 GI:115478089 GeneID:4346470

Length

5338 bp

Definition

Oryza sativa Japonica Group Os09g0135700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:2644031..2649368

Sequence Coding Region

2644225..2644520,2644603..2644696,2648419..2648476,2648554..2648597,2648690..2648866

Expression

GEO Profiles:Os09g0135700

Genome Context

<gbrowseImage1> name=NC_008402:2644031..2649368 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:2644031..2649368 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcggcaggaggccacctgcagccttgtgctgacccaggacgcccaacaccggaagaaccagccaccgctggctgaggaggacgacgatagggatcataccgacgatgccatgccgccgccctgctcgatcttgctccgccaggaggagggcgaggcgacggcggcggcggcgggggaggggctgctggtgccgccgctcaacttcgccatggtggatcatggcgtataccgctccggcttccccgacatctccaacctgccgttcgtcgagtcccttcgcctccgctccgtcctgtgcctctgcccggagccgtacccggaggcgaaccaggagttcctccgcgcccacgggatcaggctgttccagttcggaatcgacggttccaaggagccctttgtgaacatacctgaagatagaatccgtgaggctctaaaagttgtgctagatgtggcaaatcacccggtgcttattcactgcaagcgtggaaagcatcgaactggctgtgtggttggttgcttgaggaaattgcaacgctggtgcctaacttcaatatttgatgaatatcagcgctttgctgctgccaaagcaagagtatctgacctaaggtttatggaactatttgatatctctagtttaaagcatttaccagcatcattctcatgttga</cdnaseq>

Protein Sequence

<aaseq>MRQEATCSLVLTQDAQHRKNQPPLAEEDDDRDHTDDAMPPPCSI LLRQEEGEATAAAAGEGLLVPPLNFAMVDHGVYRSGFPDISNLPFVESLRLRSVLCLC PEPYPEANQEFLRAHGIRLFQFGIDGSKEPFVNIPEDRIREALKVVLDVANHPVLIHC KRGKHRTGCVVGCLRKLQRWCLTSIFDEYQRFAAAKARVSDLRFMELFDISSLKHLPA SFSC</aaseq>

Gene Sequence

<dnaseqindica>195..490#573..666#4389..4446#4524..4567#4660..4836#gcgtcttgtcggcaccgcacggcgcacgccctattcctccctccttccggcgccaacccaagtacccaacccaacccaagcggaggggactccacttcatccacagccacatccacatccaccgagcaggaatccaatccgaatccaccatcagctctcctatcacattccctgcatccgtcttcgagcgagctatgcggcaggaggccacctgcagccttgtgctgacccaggacgcccaacaccggaagaaccagccaccgctggctgaggaggacgacgatagggatcataccgacgatgccatgccgccgccctgctcgatcttgctccgccaggaggagggcgaggcgacggcggcggcggcgggggaggggctgctggtgccgccgctcaacttcgccatggtggatcatggcgtataccgctccggcttccccgacatctccaacctgccgttcgtcgagtcccttcgcctccgctccgtcctgtgagtgcccgtccacctgctcttgccttgtccatcgagatggcgttgtcacctccatggtttcttgtgtccctccactcaggtgcctctgcccggagccgtacccggaggcgaaccaggagttcctccgcgcccacgggatcaggctgttccagttcggaatcgacggttccaaggtgaacaactttgaattgaacctgctatcttctcggttctgaattaaaatttgttcatctcagtctcagctatatatatgattcaaattgttcaaaagtggctcatatatttgtttgtgaaactctatgagaaatatatgaactcctagattcgattcatcaacagctagtttatttgtaactgagctaattaattaattaattagatctcctttcgttgttagtactcgtgattagtcacggattccttgttttaatatttgtcaaaatcgcagtgtgtgcggcttcatgttgtcagtgctttcatactctcgaatcttcttcttagtacttttgtaccatgtactaagccatccgtgacattattaaaaatagatagatgccttctccaagttgagcttctgcattctccactccgtgctttttgctgaaagcatctctccacaaaaattgtcctataatttgattctgctagaccacactttactaagccatagtagatttggcaactaagactgcagtgccaacttcagaaatttgatgataaactcaaatcttaaatgcgctgatgcaaagcacaggtaaaatagacagtgattgctgctgctatcaaaagcccagattcgctatcctccaccaaccgggaccgcgggatactattatggtggtatctcgacgtttggaccaggtggcacaggagttttttacctaggagcatgggtggcggtctagtctacggattgatagccactaagatatacggcggtatctcgacagttggaccaggtggcacaggagttttttacccaggagcatgggtggcggtctagcctacggattgatagccactaagatatatgtttctgtcaaacttttgtgcttgggagatgttctagttgtttctttcttcttttttggctgtgtgcattttatgcagaggccgggggtgactcagtttgattgtatcatcttgatgtaattaactgagtctaaataaagcttccattatctaaaaaaaagcccagattcagtagaacacatcagatagcaatcttttgcagtgtaaaatctacttgcgtaaatgtagcaggtgccctgtacctgttagcaaaatgaaggttggatttggggggaatttattagataatatgctgtatttattttgtgcttgcacctcttctaaggcctgtactctttctacctgatatgtattagagaaaatcccttatatgtattactgttttagtgtgacataaataataaactctatttgaaagcctgtgatgattgagcttccatagtggtcttttgtactggggctcggtaaatatttatgttttgtaatcatttcataacctagggtttttcaggttgctaaattcagatgtgatgcacagtagcttgtatataaagatatctttagcatccactcatggatatttcaagtggtccattatgttcttttggtttctggttcaattatctggtgcatacactacctcaggtagatgatatgatgtgtcagttaactagtgaaagaaaattgagtaagcaagtacttcacaaagattttcattttgttggattcatgtttgttagatcttttctgtcaacgtgtataatcaaactagaactctttcaggcattctaatttggatctagtctttgttcacaggcagagacgcttctttatctagtcacttttattttggaaaagttgtttagtagcatcagtaaaagacatcggatacttttctaaataatgtcgcaattgtcttaactgcaatacgtcgtcctaatgatgtgaagtgctagatgacattattgtcgcgtttttagtgcaaaactaacagtgcataataatcaggggcaaatccacatggaactaggaggatgcaagggcacatagtacggttttatttcttatgttagaatatcttttatatgcgtgcacctccataggccaacctcaacagcccccaaacactttgttaaattgtattgtggtccttgctcatattgccactgatagtacttaggtaggataccttgtttcaaacgtccaaatagccccttgcttggatagataatatggtctaaaagaagtatgattaaggcatcagaagaggatatagcttaatatactagagaaaaaagaaagtttgactccatagttctttcattttggccccaaaagcaaaagaagagcgagagcaaactatgtgggcacaggtccacatgtcagtgacttctccagcatgggcagtactgcagacaatccccattggtctttttccccttctactggcatactttagcttgttcaggatcaagtttttatgtttcagtccagtatgattgcaacattataggaaacatataatcccctacgacaaatagttgttgattggttacaacctttatagttctttcgtttttgcttttgccttttatgtacatatctctgtaagactgtttggttctctttggttataaaaatcacactgctaggtatcccctaaaaaaaacattataggaaacattgttcttttctggaacaaatcggagataattgtagacttcaacacaaatacacaggatataaatgcattataggaaacattgttcttttctggaacaaatgggaaataattccagacttcaacacaaatacataacatataaattgatgtcatattgaaactaccaataccttagaagcttcatctgatttggtcaatgtcatttttcgccgttaaaagggtttttagtcatttctttctctatttgttgataggaattgtcagaaactttgtgtcagttatgttgctgtgatccttgggcgcattgtttgttgtgtgattgtgcatctccagtattttttttccttcaatactcagtgagctacacattttgttaaatcataagtaagttataacaacctagaagtttttcagttcaaaaggaacaaacaatgtggacacatttttatcttataattaaaaataagttgccaaagtatggcacttcctatattgcatagtggtttgagctaaaattcgatcttgtaattttgtgatgtggattaaatccagaggtctcatactcagcatgtgccaaacaaaaaggaaaattggttcttctctctggattatattgttaatttggctcttttatgatacacggaaattttggaatagacaccttttacttgatgaattgggttggaaaactgaagtaaaatccagcttctgaaaattttattttatgttccattactggctggcaagaaccgattttagctggtggcatgtattgaagctcaatgattttagcttgaggactcaagccatgtgtttcagtatttttttttggacaaattgagaaaatgtctgtagcagtaaatggtggtcttaagtaacttagtattgtttgagcagtattggataaccaattcagccttcaactacgtttccgttgtttacaagctaatcatttttatccaagtataaagtgtagtatgcttgtatgctaattttcttatcttcttttttttgcgggaaatagcaggacaatctcctgcattgctatatatttttcatatgtcatatcgcagaactctgttgcttccttgttcctgcgacctgagatgcttcttcataaattgtcattttcatgttcaggaactaggttttggtactgaaaatagatgttgcttgcaggagccctttgtgaacatacctgaagatagaatccgtgaggctctaaaagttgtgctaggtatttaaaaatgacctaagctactaatttgtcgcattgtttttcccccctgattagatatcaaattctttttgtagatgtggcaaatcacccggtgcttattcactgcaagcgtggaaaggtaaaatagcttgattacaattcgttacggttgccttcccataattccaataagttttgagtcaaaattgtgaacaaaagaaatctgtgcagcatcgaactggctgtgtggttggttgcttgaggaaattgcaacgctggtgcctaacttcaatatttgatgaatatcagcgctttgctgctgccaaagcaagagtatctgacctaaggtttatggaactatttgatatctctagtttaaagcatttaccagcatcattctcatgttgagaaagcagcacacccagagcagcctgtgtgccaagattggcaattgtctctcggtgactctagagacctgtttatcatagtaacaagactaccttggtaagaaaactatcagtgataccttttaattgtgttttcatcattatactacttcccagtacatgtagtcgcaagtttaaccttatcatttttggagaataggtcccgagttgtagttgatgttaaagggcatagaaaccggatcggttgccaatgcagttcactgtattagttcagtgtttttcaagcgaataagagggatgcatcgggagctataccattgttgtttctgcgttagcagtaccagtatgtatttttttggcagtgcataattttttatatgttgtaattatgctcaatctgtatatcgaatagaatctcaaattgcaaggaaaaaccatcatggcccttcaagcccttgactgaatgtgtgtaattgttcagtgttttaaagaagattaagttc</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0135700, RefSeq:Os09g0135700