Difference between revisions of "Os01g0347000"

From RiceWiki
Jump to: navigation, search
 
Line 20: Line 20:
  
 
==Structured Information==
 
==Structured Information==
{{JaponicaGene|
+
    [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 1]]
GeneName = Os01g0347000|
 
Description = Similar to PROPYZAMIDE-HTPERSENSITIVE 1|
 
Version = NM_001049501.1 GI:115436415 GeneID:4326496|
 
Length = 5053 bp|
 
Definition = Oryza sativa Japonica Group Os01g0347000, complete gene.|
 
Source = Oryza sativa Japonica Group
 
 
 
  ORGANISM  Oryza sativa Japonica Group
 
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
 
            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
 
            clade; Ehrhartoideae; Oryzeae; Oryza.
 
|
 
Chromosome = [[:category:Japonica Chromosome 1|Chromosome 1]]|
 
AP = Chromosome 1:13937513..13942565|
 
CDS = 13937521..13937571,13937680..13937795,13938182..13938404,13938802..13938978,13939057..13939217<br>,13939300..13940299,13940703..13940849,13940929..13941156,13941251..13941408<br>,13941587..13941941|
 
GCID = <gbrowseImage1>
 
name=NC_008394:13937513..13942565
 
source=RiceChromosome01
 
preset=GeneLocation
 
</gbrowseImage1>|
 
GSID = <gbrowseImage2>
 
name=NC_008394:13937513..13942565
 
source=RiceChromosome01
 
preset=GeneLocation
 
</gbrowseImage2>|
 
CDNA = <cdnaseq>atggaagagggattcgtggaatcaggatccttctcccgctcctcctccttcggtgggttcgaggaatggatggcgctggtgaggaaacgcaatgggagtgggacgccctcctcgtcgtctccgcagcagcccaggtctggtggatttgctgcccaatcttcagtcagttcagaaggactagaacttggtcacccttatagcgatgcgattgactatagcttatcataccaactaccaacaacaagcttatgggataggcttgggagggttactatgatggacatcgagtcaagtgacttcaactggagctctctctcttcactgcaccatacaaaacatactgatactagtacagaaccctacgaggatgacaccagcagaagttttgaggttacagtaaattctggaggagttgttttcattgcattattcaaaacatctgaatatgatgaccttccgtccaaggagactgcagcggtcattaaaatagcgccttcaaggatggccactcaatcagaacgctttggctatgaacttgcgaaatggcttggagtgaggactcctcagggcagagtgattcacaacttctcatctgaatggcatcaaatgaaggatgcagttgagaacgctcgggatgcagcgatatcttcttgtgatgaactcgaggaaatgatttgcactgagatgctagaggcgctcgaattgagccgatgcttattcctaatgaattatgtacatggctcccctctgctagagaacacaatgccatttgattcacatgattctgctgaaaaaactgctgaagctttaggaagggtcttgatactggaccttgtactgagaaatgaagacaggttgcgatgccgcccccttggttggcggggaaattacgcaaatttacttgttgccgacaggaatgcttatgcaaacctcgattcattagatgatgtttatgattctgcaatcattcgttacaagccagagatcatcagaagccctcagaatcggaagccgagaagagcagtttcaataagtggcagtattggctcagatacatctgatctcatgttgccggacaatcctagtcagcctgagatttccagctttcacatcatagccattgattcaggtgttccacgcagaccgcctgcttgcaaacgggcgaaagatcaagagagctatccaaagcttgtggaacttacactcaacaattgggattactcttctaaccttttgtttgaactgtcatttggaaaactcggtatcccaggacctgaagaatttgatgtgtcatctgatcttagttaccattctcctctgtccgaaagtgatatggtagctgcggtgaattccttccgaggaggttttcgtagtgctttgagggaccttcaacgattccacattttccttgtcacactttaccagaagctggatggtctattgaaaatctttttcaatcttatgtataaagtattaaatgaatatgacagggaagacgctggttcatctgattcaccgtgttccacagagacacacatggattcacatgattctgaagttccaaagcatatgcgtaggccttcccgtactttatcccgtgacaattttgacctatcatctccttccagtcgagagaactttatgattaagaatttcaaaggaagcagtgatgcttcccgtggattgcggctgacaatgaaactacgggattttaataagtatgctaaggcagacggtgaattatgcaaagaaatagaacaatggaatgacatgctcaggacagaagttgtgaaattgtgtcaagacaacagttttaacacgggtttctttgaaggaatagataatagcattgcagttgatgcttatgaattgaaggttcgacttgagcacattcttgagaggatatcattgatttctgatgctgcaagcaccgagcgtccctctcagatcacggattatttgtatattggtggtgctctagctgctcggtcaacatatacacttaaacaccttggcataacccatgttttatgcttgtgcgcaaatgaaattgggcaagcagaatctcagcagcctgatcgtttcgactatcagaacttctcaattaacgatgatgaaaatgcagacatcagtgatgtcttccaagatgcttcagatttcattgattatgttcaacacctacatggcaaagtactcgtccattgttttgaaggaaaaagtcggagcgcaactgttgttcttgcttacctgatgctgagaaaaaaattcactcttctggaagcatggaacatgctaaagaaggtgcaccgacgagcgcacccgaacgacggcttcgccaaggtcttgttggatcttgacaagaaactgcatggtaaaatctccatggagtggcaccacaggaggcctgcaatgaaggtgtgccccatctgcggcaagaacgctgggctcagcagcagctcactgaagctccacctgcagaaggcgcaccggaagatatcgtcggggagcgtcgacaccgccatgagtctggagatccagaaggcggtggaggcgatcaaggctgggcgtggcggcggtgacagcccgacgcatagcgctgagaaggttacttcctga</cdnaseq>|
 
AA = <aaseq>MEEGFVESGSFSRSSSFGGFEEWMALVRKRNGSGTPSSSSPQQP                    RSGGFAAQSSVSSEGLELGHPYSDAIDYSLSYQLPTTSLWDRLGRVTMMDIESSDFNW                    SSLSSLHHTKHTDTSTEPYEDDTSRSFEVTVNSGGVVFIALFKTSEYDDLPSKETAAV                    IKIAPSRMATQSERFGYELAKWLGVRTPQGRVIHNFSSEWHQMKDAVENARDAAISSC                    DELEEMICTEMLEALELSRCLFLMNYVHGSPLLENTMPFDSHDSAEKTAEALGRVLIL                    DLVLRNEDRLRCRPLGWRGNYANLLVADRNAYANLDSLDDVYDSAIIRYKPEIIRSPQ                    NRKPRRAVSISGSIGSDTSDLMLPDNPSQPEISSFHIIAIDSGVPRRPPACKRAKDQE                    SYPKLVELTLNNWDYSSNLLFELSFGKLGIPGPEEFDVSSDLSYHSPLSESDMVAAVN                    SFRGGFRSALRDLQRFHIFLVTLYQKLDGLLKIFFNLMYKVLNEYDREDAGSSDSPCS                    TETHMDSHDSEVPKHMRRPSRTLSRDNFDLSSPSSRENFMIKNFKGSSDASRGLRLTM                    KLRDFNKYAKADGELCKEIEQWNDMLRTEVVKLCQDNSFNTGFFEGIDNSIAVDAYEL                    KVRLEHILERISLISDAASTERPSQITDYLYIGGALAARSTYTLKHLGITHVLCLCAN                    EIGQAESQQPDRFDYQNFSINDDENADISDVFQDASDFIDYVQHLHGKVLVHCFEGKS                    RSATVVLAYLMLRKKFTLLEAWNMLKKVHRRAHPNDGFAKVLLDLDKKLHGKISMEWH                    HRRPAMKVCPICGKNAGLSSSSLKLHLQKAHRKISSGSVDTAMSLEIQKAVEAIKAGR                    GGGDSPTHSAEKVTS</aaseq>|
 
DNA = <dnaseqindica>9..59#168..283#670..892#1290..1466#1545..1705#1788..2787#3191..3337#3417..3644#3739..3896#4075..4429#attggaatatggaagagggattcgtggaatcaggatccttctcccgctcctcctccttcgtaagtgcgtccgaaatgatatctcagaacagggaaaccatctctttgcttggtcttgtttgattgttcttgggaggtttcgttaccctcgatctcggtttcttgcagggtgggttcgaggaatggatggcgctggtgaggaaacgcaatgggagtgggacgccctcctcgtcgtctccgcagcagcccaggtctggtggatttgctgcccaatcttcagtcaggtatatatcatttgtctcccgttgatgtattaacgatgaaagatttgcatctccgttgtactttcgttttccatgtctgacccttacatggatatagattgtactattagattagcatgattcgtattgtgatattttttttttgtaattgtgtttagattatcaccaattcaccatatcagagaaaatgaacaagatacttgtttatagatgtactaaagcatgatttctgctcattcattgtagaaggatacagtgacatgatttcaactgtggcattatgggcacgatgttcttagattgcctcattggatgaggttcttgataaagctcatatcattcagtatctgctaattaatatggtttctgtgcactatatttttcagttcagaaggactagaacttggtcacccttatagcgatgcgattgactatagcttatcataccaactaccaacaacaagcttatgggataggcttgggagggttactatgatggacatcgagtcaagtgacttcaactggagctctctctcttcactgcaccatacaaaacatactgatactagtacagaaccctacgaggatgacaccagcagaagttttgaggtctattgttttcacttgtatcttttacagattatgttttgcattgttggaaaatgttgtcaatactagttataatatcattttttttagaaaacaacagcaggagctctgccggaatttgattagagatataaaaacatagttatactgtcatttcccaacaaaattttattaccatatacttttatctgttttcgaattccattacaaagtgtacatctttgcaactgcatcgtagatatgtatctatcagcataagcctaaaggccagtgcattatcctgcgagagacttcatgtccattagcattccccttcatatgaatgttcaaaataaatataaattttgtttatttgtcatgtctctagctcattttctacatgtatctttcttcataggttacagtaaattctggaggagttgttttcattgcattattcaaaacatctgaatatgatgaccttccgtccaaggagactgcagcggtcattaaaatagcgccttcaaggatggccactcaatcagaacgctttggctatgaacttgcgaaatggcttggagtgaggactcctcaggtgaacacccactttgcttgctggaattctggttaaccataaaaatattacattgcactactctgttggccaatgcagggcagagtgattcacaacttctcatctgaatggcatcaaatgaaggatgcagttgagaacgctcgggatgcagcgatatcttcttgtgatgaactcgaggaaatgatttgcactgagatgctagaggcgctcgaattgagccgatgcttattcctaatgaagtatacacatcaagctaccagtaatgtacatgacggaaatggtccttccttaacatgaaagaatttttgtgctgttttgcagttatgtacatggctcccctctgctagagaacacaatgccatttgattcacatgattctgctgaaaaaactgctgaagctttaggaagggtcttgatactggaccttgtactgagaaatgaagacaggttgcgatgccgcccccttggttggcggggaaattacgcaaatttacttgttgccgacaggaatgcttatgcaaacctcgattcattagatgatgtttatgattctgcaatcattcgttacaagccagagatcatcagaagccctcagaatcggaagccgagaagagcagtttcaataagtggcagtattggctcagatacatctgatctcatgttgccggacaatcctagtcagcctgagatttccagctttcacatcatagccattgattcaggtgttccacgcagaccgcctgcttgcaaacgggcgaaagatcaagagagctatccaaagcttgtggaacttacactcaacaattgggattactcttctaaccttttgtttgaactgtcatttggaaaactcggtatcccaggacctgaagaatttgatgtgtcatctgatcttagttaccattctcctctgtccgaaagtgatatggtagctgcggtgaattccttccgaggaggttttcgtagtgctttgagggaccttcaacgattccacattttccttgtcacactttaccagaagctggatggtctattgaaaatctttttcaatcttatgtataaagtattaaatgaatatgacagggaagacgctggttcatctgattcaccgtgttccacagagacacacatggattcacatgattctgaagttccaaagcatatgcgtaggccttcccgtactttatcccgtgacaattttgacctatcatctccttccagtcgagagaactttatgattaagaatttcaaaggaagcagtgatgcttcccgtggattgcggctgacaatgaaactacgggattttaataagtatgctaaggttaacaccttttggagtgcacatttgaaatttcattttcttaaaatattacatgagcgcctgtctaatgtctagttttttcttcacacttttgatgatcgaaaattttcatgctgtcatatcagatgggaagatataaaagatgtcaaataggtcatcctgaaaatagcaaactggatgaaaccaaatacctgtcagtaaatggtgtcagcatctttttttaaaaatgaaatggtttcaatatttggaacactagtttgatgctaattgaacatttaatttgcaatacttacagatcagttctcgacaattatttccataatgcagattttatgaagattacctcttgtttttcgaaacttcatcaactgattctattcatcatggtataaaatatttacaggcagacggtgaattatgcaaagaaatagaacaatggaatgacatgctcaggacagaagttgtgaaattgtgtcaagacaacagttttaacacgggtttctttgaaggaatagataatagcattgcagttgatgcttatgaattgaaggtaatcctaacgtgcccatctttcaagcaactaactatacatcgcagtaatggaaaataacaggaaattttgcttacaggttcgacttgagcacattcttgagaggatatcattgatttctgatgctgcaagcaccgagcgtccctctcagatcacggattatttgtatattggtggtgctctagctgctcggtcaacatatacacttaaacaccttggcataacccatgttttatgcttgtgcgcaaatgaaattgggcaagcagaatctcagcagcctgatcgtttcgactatcagaacttctcagtaagtatacctgagaaagtttgaggaaaaacttctagagcttcggactaattgttttgtttccttgcaatgcttcattgtttcatttctgtagattaacgatgatgaaaatgcagacatcagtgatgtcttccaagatgcttcagatttcattgattatgttcaacacctacatggcaaagtactcgtccattgttttgaaggaaaaagtcggagcgcaactgttgttcttgcttacctgatgctgagaaagtaaggctgcataatagtaactttgttatgccttcgttcttgaaattatagttattgtattactttcaagaaactcgataatatactatttatatttcctttatgggtgaatgccacatatcattttttttttgctgctcaatgagacttcttgacctgcccactgtttcatgcccagaaaattcactcttctggaagcatggaacatgctaaagaaggtgcaccgacgagcgcacccgaacgacggcttcgccaaggtcttgttggatcttgacaagaaactgcatggtaaaatctccatggagtggcaccacaggaggcctgcaatgaaggtgtgccccatctgcggcaagaacgctgggctcagcagcagctcactgaagctccacctgcagaaggcgcaccggaagatatcgtcggggagcgtcgacaccgccatgagtctggagatccagaaggcggtggaggcgatcaaggctgggcgtggcggcggtgacagcccgacgcatagcgctgagaaggttacttcctgaactctttgtgatgctagggctggtgatgttcgctgagccacagcttgcatcacatcctgcatctcccagatcatgcggcaatgtgttacttcactttatgagcaaaactgtactacacctgaaattttgaccaaattatatatatataggggttgttcagattgtagcctaaataaaccttaccaaattttggcattggcaagttgacaatattaccaaaattttgacaagattccttatgtatttaccaaattttgacaacaaactaaatgtaggcacttttttggcaaccttgttaaaaattggtatggttgaaaatggcatcaatctaaacagcccctagaatacgatttgtgcagtgagatgccgaattagagatgattagcatgattccgaaagatttttcgcttttatctcaacttgttcacctgcacaagtttccttttgtggctgagtaaaagagcctgtcttaacttcagcgttgtctaattttggtccatggttctgagcaacgtggcctgtacaacaatagtgattcaggtctggcttggcgatgggcctgatgtaggcatgtagccacaacactggcagttcagtagcttaacatgttgggacagtttatgc</dnaseqindica>|
 
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001049501.1 RefSeq:Os01g0347000]|
 
}}
 
[[Category:Genes]]
 
[[Category:Japonica mRNA]]
 
[[Category:Oryza Sativa Japonica Group]]
 
[[Category:Japonica Genes]]
 
[[Category:Japonica Chromosome 1]]
 
[[Category:Chromosome 1]]
 

Latest revision as of 04:42, 14 May 2015

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information