Difference between revisions of "Os06g0649500"

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(Created page with "{{JaponicaGene| GeneName = Os06g0649500| Description = WD40-like domain containing protein| Version = NM_001064752.1 GI:115469235 GeneID:4341679| Length = 8716 bp| Defini...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os06g0649500|
 
GeneName = Os06g0649500|

Revision as of 20:26, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os06g0649500

Description

WD40-like domain containing protein

Version

NM_001064752.1 GI:115469235 GeneID:4341679

Length

8716 bp

Definition

Oryza sativa Japonica Group Os06g0649500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:27406308..27415023

Sequence Coding Region

27406401..27406534,27407395..27407476,27408004..27408082,27408182..27408279,27408407..27408463
,27409047..27409134,27409244..27409353,27409536..27409637,27409892..27410043
,27410844..27410954,27411030..27411097,27411188..27411229,27411643..27411807
,27411909..27411985,27413305..27413421,27413560..27413825,27414345..27414440
,27414524..27414590,27414683..27414736

Expression

GEO Profiles:Os06g0649500

Genome Context

<gbrowseImage1> name=NC_008399:27406308..27415023 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:27406308..27415023 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggacgaggagatggagaagaaggtgcagcagtacctgcagcggaaggggttccgcctcaccgagctcgcgttgcaggaggagcgcaaccgcatctccacctcctccgtctccgacgtcgcgctcgccaggtcggaaaatgatccggcaagatactatgatggttatagtaaactaagaacatgggcatacagttctctcgatcagtacaagcatgaattactccgtgtcctttacccagtgtttatccattccttcatggatctagtggcagagggacatacacaggaagctcggtcctttttccacacgttccatgaagaccatgaactgatgcattctagggatctccagaaactggaaggcattctttctccttcacatttggaggaaatggaactggccagatctttaaggaaaaatcaattcagaattaagttatgtgagtattcatatgagttactcctccagtatctccagaaaacacaagctcttgtggttcttggaataataaatgaacgcacaacttttgacgtatcccctggtcagccatctttaatctctgatgacacggatgttgttgctctagttggaacaaagaaggatttggcaaaacaaataaatctgaaggaggtgcattgggggttgcttgaagattcagttgaagagcgcatggagaaaacacttttagaatcagataaaactgaagcagaaagcaaggatgcagatgccgaagataacaataagagaaaatcttcggaaggtggaaagcagggaggttctgttaaaaaggtcaaaaaagataagattgcaggagccacagggaaaaccaataaatctgaaacaagcatagtttcggtggcacctcgtgtgaaaccagagcttacacttccagtgattcctgttgaagtcgagcagtcaattcttgaggatttgcgaaaccgtgcacagttgaatagcctggcattgccatctgttagcttctacacattccttaatactcataatgggctaaattgctcatcaatttcacatgacggctctttggttgtgggtggattctctgactcatcagtgaaggtttgggatatgtcaaagattggccaaccgccgaaaacatctagtccacaaggagagaatggactttcccagggtgagcgcacatcagcatcagattatggaaaaagaccttatacattattccaaggtcattctggaccagtttattccgctgcatttagcccattcggagattttctcttgtcatcatcctcagactcaacaattcgactatggagtaccaagttgaatgctaatcttgtttgctacaaaggacacaactaccctgtttgggatgtacaatttagcccagttggtcattattttgctagcgcttctcatgacaggactgctagaatttggtcaatggataaaatccagcctttgcggataatggctggacatctctctgatgttgattgtgtgcagtggcatgttaactgtaactacattgccaccggctctagtgacaaaactgtaagattatgggatgttcaaactggtgaatgtatacggatgttcattggccataggagtatggttttatcattggctatgtctcctgatgggcgatacatggcctccggagatgaagatggaaccatcatgatgtgggatctctcttctggtcggtgcgtttcaccacttgggggacacagctcttgtgtgtggtcacttgcttacagttgtgaaggggcattgcttgcatctggatcagccgactgcactgtgaaactctgggatgttgcctccagcacgaaggtccttaagacagatgatacctcaactaaccggctgaggatgctcaaaactctccgtacaaaatcaactcctgtttatactctgcggttttctcggcgaaatcttttatttgcggctggtgctctctcacttggctcctaa</cdnaseq>

Protein Sequence

<aaseq>MEDEEMEKKVQQYLQRKGFRLTELALQEERNRISTSSVSDVALA RSENDPARYYDGYSKLRTWAYSSLDQYKHELLRVLYPVFIHSFMDLVAEGHTQEARSF FHTFHEDHELMHSRDLQKLEGILSPSHLEEMELARSLRKNQFRIKLCEYSYELLLQYL QKTQALVVLGIINERTTFDVSPGQPSLISDDTDVVALVGTKKDLAKQINLKEVHWGLL EDSVEERMEKTLLESDKTEAESKDADAEDNNKRKSSEGGKQGGSVKKVKKDKIAGATG KTNKSETSIVSVAPRVKPELTLPVIPVEVEQSILEDLRNRAQLNSLALPSVSFYTFLN THNGLNCSSISHDGSLVVGGFSDSSVKVWDMSKIGQPPKTSSPQGENGLSQGERTSAS DYGKRPYTLFQGHSGPVYSAAFSPFGDFLLSSSSDSTIRLWSTKLNANLVCYKGHNYP VWDVQFSPVGHYFASASHDRTARIWSMDKIQPLRIMAGHLSDVDCVQWHVNCNYIATG SSDKTVRLWDVQTGECIRMFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLSSGRC VSPLGGHSSCVWSLAYSCEGALLASGSADCTVKLWDVASSTKVLKTDDTSTNRLRMLK TLRTKSTPVYTLRFSRRNLLFAAGALSLGS</aaseq>

Gene Sequence

<dnaseqindica>94..227#1088..1169#1697..1775#1875..1972#2100..2156#2740..2827#2937..3046#3229..3330#3585..3736#4537..4647#4723..4790#4881..4922#5336..5500#5602..5678#6998..7114#7253..7518#8038..8133#8217..8283#8376..8429#gtctcgctgctctgagtcgcgtcgcgtctccctcccgcgcgacggatccgagagccctaaaccctagaactccctcgccctcgcgtcggcgccatggaggacgaggagatggagaagaaggtgcagcagtacctgcagcggaaggggttccgcctcaccgagctcgcgttgcaggaggagcgcaaccgcatctccacctcctccgtctccgacgtcgcgctcgccaggtacacctgctcgccgccgggccctttccaatctcctctcctctcctccgccagctagctgggcgagcccccctaactctgccccgttgcgactcggacctctcggatcgaggaaacctaggtagtggattttgtgcaattttgtccagctcgcttttgggcatcgaggtgccatatcacacgtgcccgtgattgggttgcgggtgcgagtttttccgcacgaggaaatagtttgcggcatttttggagagctaaaagttgcttgattgagggttgggaattgctttgtggacgtagcaatgagtaacaccaattttgaacgatgaactctctactggtaattcccatgatgataaggacatttcagggcagtatgcagcttatgcttgataatgggttaagtagtgtccgtagatggttctactgcacttatatctagattgtagttaatacctcaagtgattaaactgatttttgggtcactaagatgccactttataaccttttttttccagattacaataattaaaactaaattttcttgtcatatactgagaaaactttaatattatggaagtatgctttgttgataaatttagtcatactattttcatatattgaagaccagatatactagagaatatctctgttcataagtaatgtggtttgactgtatgtattatgcgacgtcaccttttgttttgattggagagagtaattcttccatcttttctgtctttttttgtcagcttccaatagttgtggcatccattatttcacaataattctggctatggtttatttttcttataatcctaccgactaatgccttttggttgcattatcttctgcaatgataggtcggaaaatgatccggcaagatactatgatggttatagtaaactaagaacatgggcatacagttctctcgatcagtacaaggtgtgctacacatacatagattggacttcaccttttgatcttgcagtacattttattgtgcttcacaatcaaacatcgttagctaaaattatgagtgatttctaactgtccatttgttacatagtctttctttaatgagtgatttcatgttatttatggataattactttcatgtttgcatgctagcttcagatggaacacttttaggattatattgtcataaaccaaagcttctagaattatactttattgcctgcatgctaacttctgatggagtactttcctagcaactctttgtgttctctgcatgcattcacaatatgggccattttacaaagctaaagtacctgtccagattcataactaaaatttgctatattttgggacagagtactatatcataaacactgaatatatttttgcctccgacggacatgttaatattagatttcaatttgtgcatatttctgttcttaaatttggttatatgtatactatgtttctgaattttcatcccttttttgtagcatgaattactccgtgtcctttacccagtgtttatccattccttcatggatctagtggcagagggacatacacaggaaggtattgttagttggcagatagattagataaaccctctttgtcatgtcatgttttcttttagtttattctgggcaatttctttccttgcgggccctgcagctcggtcctttttccacacgttccatgaagaccatgaactgatgcattctagggatctccagaaactggaaggcattctttctccttcacatttggaggtcaacacttttagttctcttacattgtaacattctgttcttattgaagatcttcatttatttatttggttgtatcttctcatgattcatacactgcgcttatcattctgcatgctgtatatttcaggaaatggaactggccagatctttaaggaaaaatcaattcagaattaagttatgtgaggttgtatccacataataatttgctgtatttccatttatctctttgaactttgattctgagttgacccttttaataatttaaccaatttatgaagacaaaacgttttgacagcttaatatttgttgttttgatgatatatccaggtgtttttgtttttttaccacccttttcaatttattggcttagcaatgttagagaccgagcacaaaattggcaccatttagtcagttagtcattacttactgttactcattgatcctgataggcagctaatgtcaaataaaaatatgattattttgatttgtattgactggaactagtggaccttttcttttcttttcgtttttgaactatccttgttataaggttacagcaagatcaagtttaatgttcttcctgagttaaagttttcacatttgatgttcttccaccatttgagataaaaaagtttaatgactttcctgagataaagctttcatattttgtctcccagatagcttttataatttcaaatttcttgtctgctgcaatgttatttaaaaaaaaacacatctcgtgatccaattattgaatttggttgcagtattcatatgagttactcctccagtatctccagaaaacacaagctcttgtggttcttggaataataaatgaacgcacaacttttgacggtaacattccccaatatcattcagattaataccctaatttctgtcatgcattttctcgtttacacttctcttgtctactgtgccacttatccctgttcaatattggcagtatcccctggtcagccatctttaatctctgatgacacggatgttgttgctctagttggaacaaagaaggatttggcaaaacaaataaatctgaaggaggtgcattggggggtatggtctgcatcagtcttgttgaccgctattgcctgttctatctatttgttgatgatttggattcaacagatcgaaacaatccacaccaatcagttatttgatgggattctatcattttcattgaacttttaactatgctcaggcattttatttttgtaaaattaaattctggtatgcagttgcttgaagattcagttgaagagcgcatggagaaaacacttttagaatcagataaaactgaagcagaaagcaaggatgcagatgccgaagataacaataaggtactctttatcgtatcgaagatttgttaagtttactacctatatcctcagccactgatagaagagccatctatttctttttgtttgggccaggctattagcagcttgttgtcttatacttccttaagcagtccatagaaaatatgcattgcttagctccactctgcatgttcctgtgcttcccagttttgagtccaaattgatgtttcttagtattttagcttcatatttttatcttcttatttttgctgcagagaaaatcttcggaaggtggaaagcagggaggttctgttaaaaaggtcaaaaaagataagattgcaggagccacagggaaaaccaataaatctgaaacaagcatagtttcggtggcacctcgtgtgaaaccagagcttacacttccagtgatgtacacttaaatcccttcatatctctcttaggaaaaatctagtttggtcgtttgactttgatatctagcctggtctctaacctaaagtttttaaaattctccatcctgtggatttttcaggacataataagttattttaaatggattcgtcattccaacttaggacaattttaattttaattttattttcttttttttttgcccgttgcgttttcctatctgtgatattctgattatgtttcccatttttatgccagtccatattaaccatgttttgcttcaattcatgcacctactattccatttgttttctttatgaatttctaatccaggacaaggccagaacttattcaaagctgtcctgtacatacactatggaccaacatatattgttcaacacaacatgcttcattacacatgctgctcaatgtttgttctgctagttttttctctctctaaaattacctggttaagccaactcaaatagtatggaaggtggaattgtatccaccggccaatttttattcgttagattgttgatgacgattatgtggacctgactctttgccagtttgcttaactgcagtacatttcaacacttcaaaattactttttgtaagacactgaacaaaggcatgttgccttttttgcttttcaagaaatcaacaaaattgaccatccaatcctcttagtcatgcaacttatttctaggtggctcatctatctacatttttatctgggaagaagtatttcaaccttgggttgtaagaatctgagatatatttatccttttatttcagtcctgttgaagtcgagcagtcaattcttgaggatttgcgaaaccgtgcacagttgaatagcctggcattgccatctgttagcttctacacattccttaatactcataatgggtaaatttctttgtggcttaatatctgacactgccaatttgcatccttttctctgatcattatctgtggacataggctaaattgctcatcaatttcacatgacggctctttggttgtgggtggattctctgactcatcagtgaaggctagtcctttttgtccctttttggtactttgttcttatatatgtgatttctgtattatttttgtaacaataaaactttgtgttcaccaggtttgggatatgtcaaagattggccaaccgccgaaaacatgttagttgttcttcactacttaatgttgtttgattccaccttgtgttatgctgaaatacttccattatgtgctgaaatgttttgataattgccttaagtttacagaacaacatagttttattcatttcatttagttgatgttacaacttacaagtactgaaatattttttccatattaatgcttgtgtggatctgtcattcaaaaatgtcttctcgacctaccgacatataatgattttttgtcatactagtgcactaagttatgacatagcagtatacttgattccataacctgttcaggaatcaggactcttgaatagtcttagcatgtcaattatcctaagtcctaacatgagagtgttttgttttatataatggtggtatttgctgattgaagaaactttaattttcagctagtccacaaggagagaatggactttcccagggtgagcgcacatcagcatcagattatggaaaaagaccttatacattattccaaggtcattctggaccagtttattccgctgcatttagcccattcggagattttctcttgtcatcatcctcagactcaacaagtaaaacatccttacattttgcttattttcatatagtttgttttccttttcgtttttcaactgaacatatcgttttcatatatattttttattccttacagttcgactatggagtaccaagttgaatgctaatcttgtttgctacaaaggacacaactaccctgtttgggatgtacaagtatgtgattaaccttttttttttgtgtcacatgtgcaagtgcaacatatctgtggtgcttttactttcatgaactgtttaaacgccttgtgtttgtattgaaaagaaaaatgattgtgtgattcgcataacttaaatcagaattgagctgatctatggaagctagtgtactgatctcttaggcattacaaccagtttttgaattactggttgcagcttttgagacagactatgtacaactattctgagcttcaaacacagatcatgtcataaaataagcttttgccatttgagtctgttgtttcatcttggtatgttggccattgctgttaaataatgagaccttattaaggatcccactgccttcagttttcaatatgtaaataaaaaattaggtggcaatggatgcctccagattatattgttcaatcaatatgcattgcctgctattgcatcagtgcttattttggtgcatgaggtgtgaatatattacatgaacttgcgaggtggttgcattataatacacaaacttgtaaaacattcgttccggtgcacaaacttgaggtttgtgtgaaccaaggtcaaaagggcaaaatatggctaatcttgctgagttgagtgttgattaggatgccatgtaagcatgcatgttaggactatgccatatacatatgcatgtactgagtaaaacatagaacaagacatactgattgaacaaagaaagacatatagcaaaccgataaaggatgcaagggatacaaaggaaggacaaagtggaaaccaagtacaaggttatttgcaaatataacatgtatcatgccctcctcacatgtgcacgccatgtcctaatgagcatccaacttggtaataagttgccatgcccttttggccttggttcacacgcaccagacaagttcatgcaccaaaatgaacgtttaataagtttatgtgccctcctcacatgtgcacgccatgtcctaatgagcatccaacttggtaataagttgccatgcccttttggccttggttcacacgcaccagacaagttcatgcaccaaaatgaacgtttaataagtttatgtgctgcacccccttgacaggttcgtgtacccccttgtgctctccctttttgtaatgtatccctagccagtttttcattttcaatgttctgcatgatggagtagttttatggggttatgcaccctgttaaaaagcttatgatcaatttttactgtcccaactgccaagttttctgattctgttgttgtaaacattgtgctatgatacatgttgatacatttgcttttttcttttgtcagtttagcccagttggtcattattttgctagcgcttctcatgacaggactgctagaatttggtcaatggataaaatccagcctttgcggataatggctggacatctctctgatgttgatgtaagtgtatttctggttcaaatcatttgcttatattggagcacttgatgctggatagatgcttattctttaatgctttgtgctgatgcctgcatattcttactgagctttatctactacataatatttggctgacagtgtgtgcagtggcatgttaactgtaactacattgccaccggctctagtgacaaaactgtaagattatgggatgttcaaactggtgaatgtatacggatgttcattggccataggagtatggttttatcattggctatgtctcctgatgggcgatacatggcctccggagatgaagatggaaccatcatgatgtgggatctctcttctggtcggtgcgtttcaccacttgggggacacagctcttgtgtgtggtcacttgcttacaggtaatcattgtttgttgctgcgggtaaataatagctttaatccacattgtttacatataagaatcggcttaaccgattcttttatccttgttgagagaaatttgaagggctatcttgtgagaccttttgacagtgacagtttgttatccccttgaatatctggtttgaatttttattcttgaaaaaaactaagaatatcagtacatatttcagagagttattgcataggcatgtcaaccttgcagcccactcagttgttggtttcaattagtttcttatgaaacctattgtttgaatgagcctgtaaatgtgtattatgccttgcttcctaagctacttaagggctgcattttgatgccgcctttattcggaggacgctttccataaatggtgtatacacattcctggactctgtttatgtatgttcatttgttattcctttcagcgagaagttataatatgctgtcctgtgatgtcatgcagagctctcttatttaacttgttctgccactgttgtagttgtgaaggggcattgcttgcatctggatcagccgactgcactgtgaaactctgggatgttgcctccagcacgaaggtccttaagacagatgatacgtgagttagttttgaactgctcataaagatgctttatacatataaatcattgccttactcttgtttgtaaaatatacttacagctcaactaaccggctgaggatgctcaaaactctccgtacaaaatcaactcctgtttatactctgcgggtgagaatctctcggtccatgcattatgttgcataagttaaggctgttatactgtatgcaatttaaatgaaactgctttcttgatgttgtagttttctcggcgaaatcttttatttgcggctggtgctctctcacttggctcctaagcttctgtatgttctgtagaatacaactaccaaacattctttcagttttatctcaagtgaagttagtgcctagtgagtagtgagcctgcttttaaggttaatctgtagcacgcgcgtattgtaattcgttccaatgtttgttgtcttgtgactttgtaagttgtaacaatcgccttatttaaatcatgtaattctttttctggcggtgaaaaaccaaaaggaggtgatgggtactgctggaaggaagaattataaagaggtaaacaacgtggctaattttttttgtc</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0649500, RefSeq:Os06g0649500