Difference between revisions of "Os06g0677500"

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(Created page with "{{JaponicaGene| GeneName = Os06g0677500| Description = Protein prenyltransferase domain containing protein| Version = NM_001064892.1 GI:115469515 GeneID:4341838| Length = ...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os06g0677500|
 
GeneName = Os06g0677500|

Revision as of 20:27, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os06g0677500

Description

Protein prenyltransferase domain containing protein

Version

NM_001064892.1 GI:115469515 GeneID:4341838

Length

4410 bp

Definition

Oryza sativa Japonica Group Os06g0677500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:29020965..29025374

Sequence Coding Region

29021067..29021182,29021506..29021665,29021938..29022104,29022180..29022284,29022752..29023519
,29023597..29023786,29024418..29024595,29024761..29025152

Expression

GEO Profiles:Os06g0677500

Genome Context

<gbrowseImage1> name=NC_008399:29020965..29025374 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:29020965..29025374 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcacggccggcctcgccgcccggacaagccggaggacgcggcggcggcggaggccaaggccgccaagctccgcgtcctccaggcacaggtcctgcacaaccaccactcccgcacctacaccaaggaggcactcgggctgagcttcaagctgctagagattaatcctgaggcgtacacagcatggaactaccggaagctcgcgtttcagcacaacattggggagctttccgagccggaggccatcaaatctgccattgatgatgagctcagagtggtagaggttgcattgaggcagaacccaaaatcctacggggcttggtatcaccggaagtggttgctaaatcaaaagctcgccccagtggatttcaagtgtgaatttggcctcttggataaactactgaaggtggacgcaaggaatttccatggatggaattaccgcaggttccttgccagattcatgggggttccagaagaggaagagcttaagtacactatggataagataagtgacaacttcagtaattactcagcatggcataatcgcagtatacttctgtccaatctgctaatcaaacagagcaagggtttcgagtcaaagcagaagatcttttcagaggagtttgaacttgtaactcaggccctttttacagacccaagtgatcaaagtggatggttctatcacctttggcttttagctcagacatctagtccagagaatccacagctgattgcttcgtggccttctaatggttcaaacctcagtttatcttccttgagctccatttgttgttactcactgaaggaagggattctaccaattgttctttattttaatgagcctgtgaaagggttaagttcatcgagtgtgagcttgaattctgatttggtggttagtaagaacattcagtggaggcccctttcagtaacagattctggacattctaactgttgggtcacttatcttgaagtatcaaacttggaatgtaacagtttgcagcaattttcagttgaagtaagcataaccaattcagatgaaattgtgtccagaagcggctctaattataactgtcccgtgcatttctcatttacctttgaactcagcaacaatgatagtacagccaaggatattgatccaattcatgaactaatctcctgggatttctcagagccactcctgtctcatgtaaaccccagttgtatctgttttgagcagttaaagatcactaattcattggttcacaaggagtcaaattggcatttggagagactatctgatgaaatagacctatttagagaattgcacgatgacaatagcaagtttgcaaagttgacattagcacgcttattgcttgcctgtgctgcaataaagtcccgtggaagttctcttgttgaaaggaagggatactgtgaagagtcgctcgggctctttaatgacttgatcgacctggatccatctcataaaaggtactacgaggatgagcggagcctagtcttaatggatcagttaacatgtgacatggaggctttcaagaaatactgttcagtcaaagctctaccaaagttagctccattaaaccatgttcagctttgcagattatctttaacgcgtattggatttgctgaacgcttgttgtgggtccaaatgctggacctaagccacaacaacctcagatcgattgaaggtttggaggctttgcagcagcttgtatgcttgaacctcggcaacaaccagatcagtagtttcacagcacttgaaccactcacgaagataatttctttgaaagtactggatttatcttgcaacgagattggaactcacccaatcgacacaacccggtacatctgcccatctccattctcacatagagttgaagcatgtgaagcttttgaagaatgccggaagaaaaatattaacgtggaggaattctgggatgccatactgttcttcaaacatgtgaatttggtacagctttgccttgaaggaaatgcagttaccaacaaggagaacttaagaactcttgtggtgacactcaatccatctctaaaatggcttgatggcaaatttgttcattag</cdnaseq>

Protein Sequence

<aaseq>MHGRPRRPDKPEDAAAAEAKAAKLRVLQAQVLHNHHSRTYTKEA LGLSFKLLEINPEAYTAWNYRKLAFQHNIGELSEPEAIKSAIDDELRVVEVALRQNPK SYGAWYHRKWLLNQKLAPVDFKCEFGLLDKLLKVDARNFHGWNYRRFLARFMGVPEEE ELKYTMDKISDNFSNYSAWHNRSILLSNLLIKQSKGFESKQKIFSEEFELVTQALFTD PSDQSGWFYHLWLLAQTSSPENPQLIASWPSNGSNLSLSSLSSICCYSLKEGILPIVL YFNEPVKGLSSSSVSLNSDLVVSKNIQWRPLSVTDSGHSNCWVTYLEVSNLECNSLQQ FSVEVSITNSDEIVSRSGSNYNCPVHFSFTFELSNNDSTAKDIDPIHELISWDFSEPL LSHVNPSCICFEQLKITNSLVHKESNWHLERLSDEIDLFRELHDDNSKFAKLTLARLL LACAAIKSRGSSLVERKGYCEESLGLFNDLIDLDPSHKRYYEDERSLVLMDQLTCDME AFKKYCSVKALPKLAPLNHVQLCRLSLTRIGFAERLLWVQMLDLSHNNLRSIEGLEAL QQLVCLNLGNNQISSFTALEPLTKIISLKVLDLSCNEIGTHPIDTTRYICPSPFSHRV EACEAFEECRKKNINVEEFWDAILFFKHVNLVQLCLEGNAVTNKENLRTLVVTLNPSL KWLDGKFVH</aaseq>

Gene Sequence

<dnaseqindica>103..218#542..701#974..1140#1216..1320#1788..2555#2633..2822#3454..3631#3797..4188#tggggattctaagttccaacaatccaatctcctcctcttcctcctctccttgagatccgatccaatccaaccctgcggcagccgcctcgccggaggaggaggatgcacggccggcctcgccgcccggacaagccggaggacgcggcggcggcggaggccaaggccgccaagctccgcgtcctccaggcacaggtcctgcacaaccaccactcccgcacgtaagcatccatccatccatccatccatcctccttctcctcccttagggccgcgcctcctccaatggctcgtaagatcgaattcgatgggtctttatggctcagaaattggtatccgtggaggatttcaggccgaaagattcgatcttgttcttcttcttctgttcaattcttcttgtttgattctagtgcctactaaagctctcacatttttggctttcttctgttccaaaaggtcttaagattagattcaggttatcacgttcgtaattcagtgacagaatgattgaatgaacttgttgtttggatcaatgggacctgcagctacaccaaggaggcactcgggctgagcttcaagctgctagagattaatcctgaggcgtacacagcatggaactaccggaagctcgcgtttcagcacaacattggggagctttccgagccggaggccatcaaatctgccattgatgatgagctcagagtggtgagctttgaacttgtgattaattgtatagaacatgccaccatggatcagattgtcctgtgctcttcattagaggctatgctttctcaagaaactaaattagtcatctttgttgggatcaaaactcggtcacagagacaggaatagcaattacagttagaaaatgcaaatggtagtgtctaataagtattgtgtttctatcatgatttacctgtttcaagtgtcaatgcagttgatttgcttatatgaccctcagctatgaatttttgaaggtagaggttgcattgaggcagaacccaaaatcctacggggcttggtatcaccggaagtggttgctaaatcaaaagctcgccccagtggatttcaagtgtgaatttggcctcttggataaactactgaaggtggacgcaaggaatttccatggatggaattaccgcaggtaaatttactttatattggaaattcagacccagactatctgtttggaaccttggattgatttccccctgggcaggttccttgccagattcatgggggttccagaagaggaagagcttaagtacactatggataagataagtgacaacttcagtaattactcagcatggcataatcgcaggtatgccgtagttaatatacattttttctaaatgctcttagcacatgtccatctggtgatgtttgaacttttaattggagtcagtatatggatcaaaacatatgcaactaataacagtaggtcaagtgaacccttaactactaaagtcctgtgtcttatgttctgtctgtagtaaaagattgctcaaatctggtgaacaactgaactgacattgatttataaataatcaagtgcttatcatgtaaaacaacagattaacttgaggacttggcgtcttagattagcacttaattttggtaccctggcttactatccttaattagacttaatttgttttgagaatttgtattatccttgttgttagtggtttccacagttggtattatgtttactcatcagatcttggtagttacttttgtacgatatgttaagctatatgcttcagtgtctcactccatgtattgcagtatacttctgtccaatctgctaatcaaacagagcaagggtttcgagtcaaagcagaagatcttttcagaggagtttgaacttgtaactcaggccctttttacagacccaagtgatcaaagtggatggttctatcacctttggcttttagctcagacatctagtccagagaatccacagctgattgcttcgtggccttctaatggttcaaacctcagtttatcttccttgagctccatttgttgttactcactgaaggaagggattctaccaattgttctttattttaatgagcctgtgaaagggttaagttcatcgagtgtgagcttgaattctgatttggtggttagtaagaacattcagtggaggcccctttcagtaacagattctggacattctaactgttgggtcacttatcttgaagtatcaaacttggaatgtaacagtttgcagcaattttcagttgaagtaagcataaccaattcagatgaaattgtgtccagaagcggctctaattataactgtcccgtgcatttctcatttacctttgaactcagcaacaatgatagtacagccaaggatattgatccaattcatgaactaatctcctgggatttctcagagccactcctgtctcatgtaaaccccagttgtatctgttttgagcagttaaagatcactaattcattggttcacaaggagtcaaattggcatttggagagactatctgatgaaatagacctatttagagaattgcacgatgacaataggttaggccatttcactcttttgcatcttttgcttaatttgtttggcttcccttttcacattatgccctatttctcagcaagtttgcaaagttgacattagcacgcttattgcttgcctgtgctgcaataaagtcccgtggaagttctcttgttgaaaggaagggatactgtgaagagtcgctcgggctctttaatgacttgatcgacctggatccatctcataaaaggtactacgaggatgagcggagcctagtcttaatggatcaggtaacatcaactcatatgaaaaactatgaatttcccagttaccactaatctgactggtttattttggccaaagggatcattatgatttatggaaaccatcaactaaaattttgtgaatcaatatctcaccattttatcatctttcatgcatgaacagattatttgcaagaaatatcttgtatcggagatagatgatgcctttctctttggcttttcttttttaaaaaaatattgtgtgcttgtatttgtgaggatgacgtaaagtgaaattacaacaggctggccttttacatattctaattcgctgcaagtttgttgtattatgtttgtataaatataaatacattgttctaagtcaatgagtagactaatcatctacatgccccttgaaaccatgtagttatgccggtaaaataattctcttaacgcttcgaacttttctggtttacagtttttgcagattacgaccagtcatgtttgaaagttagaactgtaacagcgttaatgcatagatgaattatgcctagttctttttttttaacataaaaagtgacccgtttctattaactgtcattcaaatcttatttagagcatacaatacgctgctatctaacagaacatttccttgcagttaacatgtgacatggaggctttcaagaaatactgttcagtcaaagctctaccaaagttagctccattaaaccatgttcagctttgcagattatctttaacgcgtattggatttgctgaacgcttgttgtgggtccaaatgctggacctaagccacaacaacctcagatcgattgaaggtgagaccttttcataccttgtaataactcattttctctacttcagaagcattaatgtcagtataacaggttctgtaaattagcttatcaaatgcgagtgccaagctaacagatgtatcaaaccaacttccatctttaaagagactaatttgttggtgatttcaggtttggaggctttgcagcagcttgtatgcttgaacctcggcaacaaccagatcagtagtttcacagcacttgaaccactcacgaagataatttctttgaaagtactggatttatcttgcaacgagattggaactcacccaatcgacacaacccggtacatctgcccatctccattctcacatagagttgaagcatgtgaagcttttgaagaatgccggaagaaaaatattaacgtggaggaattctgggatgccatactgttcttcaaacatgtgaatttggtacagctttgccttgaaggaaatgcagttaccaacaaggagaacttaagaactcttgtggtgacactcaatccatctctaaaatggcttgatggcaaatttgttcattagctgtctgtcttatacaaactttggataggatggtcatgttgtatactgtttcattatcggtttttaggaacattaggtggcaatttttgtatggcccatttcaccatttgtactggaatactgggtttcaaagcaaatttgagacacgatcatggtaattgcagagttctttctgctttgaacgagtgaattgttaaaaatgatggtattgcagagtagaag</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0677500, RefSeq:Os06g0677500