|
|
| Line 20: |
Line 20: |
| | | | |
| | ==Structured Information== | | ==Structured Information== |
| − | {{JaponicaGene|
| + | [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 1]] |
| − | GeneName = Os01g0904400|
| |
| − | Description = Similar to Chromosome assembly protein homolog|
| |
| − | Version = NM_001051658.1 GI:115441686 GeneID:4325020|
| |
| − | Length = 8309 bp|
| |
| − | Definition = Oryza sativa Japonica Group Os01g0904400, complete gene.|
| |
| − | Source = Oryza sativa Japonica Group
| |
| − | | |
| − | ORGANISM Oryza sativa Japonica Group
| |
| − | Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
| |
| − | Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
| |
| − | clade; Ehrhartoideae; Oryzeae; Oryza.
| |
| − | |
| |
| − | Chromosome = [[:category:Japonica Chromosome 1|Chromosome 1]]|
| |
| − | AP = Chromosome 1:41121767..41130075|
| |
| − | CDS = 41122324..41122440,41122588..41122662,41123025..41123250,41123380..41123468,41123548..41123641<br>,41123722..41123906,41124003..41124170,41124270..41124410,41124915..41125133<br>,41125216..41125332,41125742..41125838,41126240..41126331,41126452..41126514<br>,41126745..41126804,41126900..41127064,41127162..41127347,41127478..41127768<br>,41127850..41127993,41128080..41128760,41129633..41129950|
| |
| − | GCID = <gbrowseImage1>
| |
| − | name=NC_008394:41121767..41130075
| |
| − | source=RiceChromosome01
| |
| − | preset=GeneLocation
| |
| − | </gbrowseImage1>|
| |
| − | GSID = <gbrowseImage2>
| |
| − | name=NC_008394:41121767..41130075
| |
| − | source=RiceChromosome01
| |
| − | preset=GeneLocation
| |
| − | </gbrowseImage2>|
| |
| − | CDNA = <cdnaseq>atgcacatcaaggagatatgcctggaggggttcaagtcgtacgccgggcggacggtggtgtcggggttcgacccgctgttcaacgccatcaccgggctcaacggctccggcaagtccaacatcctcgactccatctgcttcgtgctcggcatcaccgacctccgccaggtgcgcgccgcctcgctccaggagctcgtctacaagcagggccaggccggcgtcaccaaggccaccgtctccatcgtcttcgacaactccgaccgctcccgctcgccgctcggctatgaggattcacccgagattaccgtcacgcgccagattgtagttggtgggcgaaacaagtatcttatcaatggccatcttgcacaaccttcccgagtgcagactcttttccattctgtgcagctaaatgtgaacaatccccattttctaattatgcaaggacgcataacaaaagtgctgaacatgaagcctccagaaattctctccatgttggaagaggcagcaggtacaaggatgtatgaaatgaagaaggaagctgctctgaaaacactcgagaagaagcagaataaagtggatgagattaataaactccttgatgaagaaatccttcctgcattagagaagcttaggaaagagcggtgtcagtacatgaaatgggccaatggcaatgctgacttagatcggctcaaaagattctgcatcgcttatgagtttgttcaagctgagcgagtgagagatggtgcactcaatgatgtcaaacaaatcagggcaaagattgttgagctggatgaaagcacagagaagctaaaatcagagatacaggaaatggataagaacatatctaacttggctgctgaaaaagaagctaaactaggtggtgagatgaaaactttgtcagagaaagtggataagctctcacatgcacttatcaaggaaacttctgtgatgaataatcaagaggaaacaataaagtcagaggaaaagggtgctgaaaagattctcaagaacattgaagacatcaaaagatctataattgagcgggacacagctgtaaaaaatgcagaggatggtgcagctgacatgaaaaagagagcagatgatctgacaaaagagttggacgagagtgagaaagaataccagggtgtactagcaggaaaaagcaatgcaaatgaaaagaaatgcctagaagatcaactaagagatgcaaaagctgctgtcggagaggcagaatctggactaaagcagctgacgacaaaaataagccattctgagaaggagctaaaagataagaaagcccagttggtatctaagcgtgatgaagctactgcggctgagaatgagctgaaagctagggaaaaggacttggaaactgtcaaggcatccatgcaatctgtaaattatgaagaaggacagatggaagctttgcaaaaggatcgatctattgagttagacgccgtccagaaactgaaggacaaaattcgtgctctctctggtgaactagcaaatgttcacttcaattatcgagaccctgttaagaattttgacagatcaaaagtgaaaggagtagttgcacggcttatcaaaataaaggatagctcaactgcaacagcgctggaggttgctgctggtggaaggctatacaatgtggttgttgatactgaaaccactggaaagcaactcctacaaaatggagatctcaaaagaagggtaaccatcataccattgaataagatccagacaggtaccatacctgagagagttcggcaggcagctcgtagactggttggagctgaaaatgtaacattggctctagaactggttggctatgttgaagaagtaaagaatgctatgacttatgtctttggttcaacatttgtgtgtcgaaatatggaatccgcgaaagaggttgcatttaacagagaagttggcagtacaagtgtgacccttgaaggtgacatttttcagcccagtggccttttgactggaggtagtcgcagaggtggtggggacttgctaaggcaactacatgaattagctaaagctgaggctgatcttgccaatcatgagaaaagactttctgttattgaacaaaagattgtggtgcttttgcctctgcagaagaagttcacagagttgaaatcacagtttgaactcaaatcatatgacctgtcattatttcagaaccgtgttgagcaaaatgaacatcacaagctaggtgaacttgtaaagaaacttgaacaagagcttcaggaatcaaagcaagagctaaaagcaaagcaagcgcagtacgaaaaatctgtctctactgtttctgagctagaaaagaccatcaagacttatggcagtgagcgtgaaggtagactcaaagctctggaaagaaaaatcaaatcattaaaatcggagttgcagtccatgtcgaagcaactaaaggcccatgaaagtgagagggagaggcttattatggagaaagatgctgttgccaatgagcttgccatgcttgaagagcaactgacaacttcaaaagctcaaattgccgctatgactgaaactttgaataggcatcagaccaaggttgcttccataaagcaagactatgatcaagctgaatctgagctcaacattgggcgttctaaactgaaggaatgtgactcacagataaatagcatggccaaggagcagcaaaaactgcagcagcaactaagtgattcaaatgttgaaaggaagaaaatggaaaacgaggttaagaggatggagattgagcagaaggattgctcttcaaaggttgataagttagtagagaagtacagttggattgcaactgaaaaacagttgtttggaaaaagtggcactgattatgactttgtatcatgtgaacctcataaagcacgagaagaacttgaaaatctccaagctcaacaatccagtcttgagaagagggtcaataagaaagttatggcaatgtttgagaaggcagaggatgagtataatgatttgatgtcaaagaaaaacatcattgagaatgacaagtcaaaaatcaagacagtgatagaagagttggatgagaagaagaaagagaccttgaaagtcacatggcttaaagtaaacaaggattttggatctatattcagtacacttttacctggcacaatggccaaacttgatcctcctgaaggtggtacttttttggatggtcttgaagttcgggtggcatttggaacagtttggaaacaatctttatctgaacttagtggagggcaacggtccctcctcgctcttagtcttatcctggcgctacttcttttcaaacctgcaccactttatatattagatgaggttgatgctgccctagatctgagccatacacaaaacattggtagaatgatcaaggcgcattttccgcactcccagttcatagttgtctcactaaaagagggcatgttcaacaacgcaaatgtgatattccgaacgaaatttgttgatggggtgtccactgtgacacgaacggtcccttcaaagcaaagatga</cdnaseq>|
| |
| − | AA = <aaseq>MHIKEICLEGFKSYAGRTVVSGFDPLFNAITGLNGSGKSNILDS ICFVLGITDLRQVRAASLQELVYKQGQAGVTKATVSIVFDNSDRSRSPLGYEDSPEIT VTRQIVVGGRNKYLINGHLAQPSRVQTLFHSVQLNVNNPHFLIMQGRITKVLNMKPPE ILSMLEEAAGTRMYEMKKEAALKTLEKKQNKVDEINKLLDEEILPALEKLRKERCQYM KWANGNADLDRLKRFCIAYEFVQAERVRDGALNDVKQIRAKIVELDESTEKLKSEIQE MDKNISNLAAEKEAKLGGEMKTLSEKVDKLSHALIKETSVMNNQEETIKSEEKGAEKI LKNIEDIKRSIIERDTAVKNAEDGAADMKKRADDLTKELDESEKEYQGVLAGKSNANE KKCLEDQLRDAKAAVGEAESGLKQLTTKISHSEKELKDKKAQLVSKRDEATAAENELK AREKDLETVKASMQSVNYEEGQMEALQKDRSIELDAVQKLKDKIRALSGELANVHFNY RDPVKNFDRSKVKGVVARLIKIKDSSTATALEVAAGGRLYNVVVDTETTGKQLLQNGD LKRRVTIIPLNKIQTGTIPERVRQAARRLVGAENVTLALELVGYVEEVKNAMTYVFGS TFVCRNMESAKEVAFNREVGSTSVTLEGDIFQPSGLLTGGSRRGGGDLLRQLHELAKA EADLANHEKRLSVIEQKIVVLLPLQKKFTELKSQFELKSYDLSLFQNRVEQNEHHKLG ELVKKLEQELQESKQELKAKQAQYEKSVSTVSELEKTIKTYGSEREGRLKALERKIKS LKSELQSMSKQLKAHESERERLIMEKDAVANELAMLEEQLTTSKAQIAAMTETLNRHQ TKVASIKQDYDQAESELNIGRSKLKECDSQINSMAKEQQKLQQQLSDSNVERKKMENE VKRMEIEQKDCSSKVDKLVEKYSWIATEKQLFGKSGTDYDFVSCEPHKAREELENLQA QQSSLEKRVNKKVMAMFEKAEDEYNDLMSKKNIIENDKSKIKTVIEELDEKKKETLKV TWLKVNKDFGSIFSTLLPGTMAKLDPPEGGTFLDGLEVRVAFGTVWKQSLSELSGGQR SLLALSLILALLLFKPAPLYILDEVDAALDLSHTQNIGRMIKAHFPHSQFIVVSLKEG MFNNANVIFRTKFVDGVSTVTRTVPSKQR</aaseq>|
| |
| − | DNA = <dnaseqindica>7636..7752#7414..7488#6826..7051#6608..6696#6435..6528#6170..6354#5906..6073#5666..5806#4943..5161#4744..4860#4238..4334#3745..3836#3562..3624#3272..3331#3012..3176#2729..2914#2308..2598#2083..2226#1316..1996#126..443#gcggccgcggcatttcgaattcccaaccccgaaaatccccacgccccgaaaatttttcgcgcccaaacccaccaaaccctagacccacctccggccggcgacgccgccgccggcggccggcgaggatgcacatcaaggagatatgcctggaggggttcaagtcgtacgccgggcggacggtggtgtcggggttcgacccgctgttcaacgccatcaccgggctcaacggctccggcaagtccaacatcctcgactccatctgcttcgtgctcggcatcaccgacctccgccaggtgcgcgccgcctcgctccaggagctcgtctacaagcagggccaggccggcgtcaccaaggccaccgtctccatcgtcttcgacaactccgaccgctcccgctcgccgctcggctatgaggattcacccgagattaccgtcacgcgccaggtcaatataccttcccgttgctctcgttctctatgctgccttttgagaatttcttctgtggtcgtgcgtgtttgggctccttgggtggatttggggaggaattccatggattccgttagagtttggtcctcacgagttctccaaattgacgctgtttatcggtttatatgttggtcttagaggacactgtgctttgtggtgttactggggcacggagaagatggatttcaacatctgaagatgaattccgagttttatttttagtaatttggtactaccacgaggtggtgctgatttaggtcgttgttaagtgtgaggcctggtcccctgagactattttagaggcttacttacaattttgtgcgactaagacttaccgtgggaatgggtgaaatggttgattccagggtttaagtgaatatatgttgtgttggcttccttgaactcaaggcgagccttggtggttttggactacgaaagtttgaacacggagttaggctttcaaaatgattttaagtttttttcccctttactaaagctatggccatctaagctttgagttgatcaatatgttgattgaggagttaaactgggtctttgtgttagtttttttttttgtggacaaagatatgattctggtagattgcaaggagttgtgatttgtactgtatggagctggatcaaatctaggagtaatttacctgtgatgttaaatactttgcttctcaataggctgacaactaattcataaacctctatatcattctgcttcaaccgatgctactttccgcattttgatgtctcctaattgatgtaacaagtgcatctcattcttgtataacttactaatgtactgttccttacatttgcagattgtagttggtgggcgaaacaagtatcttatcaatggccatcttgcacaaccttcccgagtgcagactcttttccattctgtgcagctaaatgtgaacaatccccattttctaattatgcaaggacgcataacaaaagtgctgaacatgaagcctccagaaattctctccatgttggaagaggcagcaggtacaaggatgtatgaaatgaagaaggaagctgctctgaaaacactcgagaagaagcagaataaagtggatgagattaataaactccttgatgaagaaatccttcctgcattagagaagcttaggaaagagcggtgtcagtacatgaaatgggccaatggcaatgctgacttagatcggctcaaaagattctgcatcgcttatgagtttgttcaagctgagcgagtgagagatggtgcactcaatgatgtcaaacaaatcagggcaaagattgttgagctggatgaaagcacagagaagctaaaatcagagatacaggaaatggataagaacatatctaacttggctgctgaaaaagaagctaaactaggtggtgagatgaaaactttgtcagagaaagtggataagctctcacatgcacttatcaaggaaacttctgtgatgaataatcaagaggaaacaataaagtcagaggaaaagggtgctgaaaaggtaactatatgttgatgacgctcactatacaggttacatttatttcaagttacttacaaggtgtacatatacatattcatttatagattctcaagaacattgaagacatcaaaagatctataattgagcgggacacagctgtaaaaaatgcagaggatggtgcagctgacatgaaaaagagagcagatgatctgacaaaagagttggacgagagtgagaaagaataccaggtacgcaaacgttgacatgccatattagctaatagcctcttgactttatgtaacatgggatattaaattctccttttccagggtgtactagcaggaaaaagcaatgcaaatgaaaagaaatgcctagaagatcaactaagagatgcaaaagctgctgtcggagaggcagaatctggactaaagcagctgacgacaaaaataagccattctgagaaggagctaaaagataagaaagcccagttggtatctaagcgtgatgaagctactgcggctgagaatgagctgaaagctagggaaaaggacttggaaactgtcaaggcatccatgcaatctgtaaattatgaagaaggacagatggaagctttgcaaaaggtatttatgaatctaaatagaaagcattactttggtataaaagctaccaactagaagtgccttacagataatctagaccatgcttgtgaacagcgtctcattactcttgttgtgttatgatcattcccaggatcgatctattgagttagacgccgtccagaaactgaaggacaaaattcgtgctctctctggtgaactagcaaatgttcacttcaattatcgagaccctgttaagaattttgacagatcaaaagtgaaaggagtagttgcacggcttatcaaaataaaggatagctcaactgcaacagcgctggaggtttgtttctgtaaattttgctactgaaattaaagttttctttcagtgaaggtgctggtctatctgtattagttcaaactatagtcaattgctgcaggttgctgctggtggaaggctatacaatgtggttgttgatactgaaaccactggaaagcaactcctacaaaatggagatctcaaaagaagggtaaccatcataccattgaataagatccagacaggtaccatacctgagagagttcggcaggcagctcgtagactggttagtgcttcattgggttacagttgtttgatatactaacctttggttgtagatgacttatctaaaaaatcaactgcatattaatttgtatgtaggttggagctgaaaatgtaacattggctctagaactggttggctatgttgaagaagtaaaggttggtattttattgtaatatttgtacaattgcgttgttttgaaacaacagtcggttgggatgttcttgcctgctagattcaatttaacctaattttaatgcttcaaaggttttttacaatcagttttagaagatcattctcccttgtgtaccttttctttcattagatcgtaagtcccagaaattccatgcttctagatctgactatctaataaatttccttattgcagaatgctatgacttatgtctttggttcaacatttgtgtgtcgaaatatggaatccgcgaaagaggtaatactgcattcaggaaatttttttgcttcagtttttactgagggctgtcaattgaagtatgatatatacgtaaaatgttggttcctattgttacatttgattctgttctttccataggttgcatttaacagagaagttggcagtacaagtgtgacccttgaaggtgacatttttcagcccagtggccttttgactggaggtagtcgcaggcaagtgccagttataacttttttttgcttgcgtattgtttatacctggtttatgctagtagaatgtggtaattgtgttcccttactatagtgtccaatgcttttatgtgaagaacaatgatttctccagcatcgtaagccttttaggataatctagggcagaaatgtaaattaatttctccattcctctgttcgtttgtgcttggtcatattcagaacctgggacatgggtgactgtctttggtgtattacaatgtactatttatgtacttcctggagataaactcaatggctgtctgatattaaaatgagtactgtgaattagtatttattgtactgactgatatgatcagataaacagattctttgtttgcttttgtttattgattttgttgatgcagaggtggtggggacttgctaaggcaactacatgaattagctaaagctgaggctgatcttgccaatcatgagaaaagactttctgttattgaacaaaaggtattaactgaattcattgcaaccacttgctgcctacgtacttcctacttccttttgaactcaggactctaccaaaaactcaggaccttgtcaagtgatgctatatcacagtatatgcagacttgctgctaaccacataataaagaatccattctaaagtttttattttgccacataacaatgccgtcacataaaatttggtgccattatacatgatggagaagatcataagagagaaatttcatttacagtgctatcatttaccttcaaactcatcaatacatcctaaattatcatgcatatgctacttttcttagtctagtgtcagcttggtggctactaagctactgtttattacaaatttaaatttgtttgatacatgtgaattttaacatgccctgttttccagattgtggtgcttttgcctctgcagaagaagttcacagagttgaaatcacagtttgaactcaaatcatatgacctgtcattatttcagaaccgtgttgagcaaaatgaacatcacaaggtatcagcttacctcatcagtatggataccaaacccctttaagctttcagttggatcaataatttttctgtttgcaattcagctaggtgaacttgtaaagaaacttgaacaagagcttcaggaatcaaagcaagagctaaaagcaaagcaagcgcagtacgaaaaatctgtctctactgtttctgagctagaaaagaccatcaagacttatggcagtgagcgtgaaggtagactcaaagctctggaaagaaaaatcaaatcattaaaatcggagttgcagtccatgtcgaagcaactaaaggttggttttctgtcttgctaaccagaagtaactaatttacaaatatagcttaatgatgttctctggggagtattttcatttttttccttcttttttttccctgctaattcctaacgaactttttttttaaaaaagaaaagaaatctgaaatgcagtccataggatagttttgttgtctcttgatatgtatattcagttagataaacgtatcctactgcttactttgaagattctgaatttcattaatttccattgatcaaccactgggaaattgttgaacatacattcaagtttgcatggtaccctatgactgattttggtatagaagctagacaattgcatctaaatatggaaaactcacatacttttgaatttctggcatgatattgttcatggcttcattctttatttctattgtctcttgtcttttgaagtgtaatcttgattattgattattcaatctttaagacatctcttgttttccatttcactaatttgcaacaggcccatgaaagtgagagggagaggcttattatggagaaagatgctgttgccaatgagcttgccatgcttgaagagcaactgacaacttcaaaagctcaaattgccgctatgactgaaactttgaataggcatcagaccaaggtagtgatgtatgctgtataatggtttctttgttgggttgttactaggctctgcactgcattcattaaagtattgtgctgtgtttcactcaccatgcaggttgcttccataaagcaagactatgatcaagctgaatctgagctcaacattgggcgttctaaactgaaggaatgtgactcacagataaatagcatggccaaggagcagcaaaaactgcagcagcaactaagtgattcaaatgttgaaaggaagaaaatggaaaacgaggtaactgttggttgtaatctctgctacatatttctgctttataggtgaagcagaccttttattttttttttctaaacaattgcatgtaacatgtaggttaagaggatggagattgagcagaaggattgctcttcaaaggttgataagttagtagagaagtacagttggattgcaactgaaaaacagttgtttggaaaaagtggcactgattatgactttgtatcatgtgaacctcataaagcacgagaagaacttgaaaatctccaagctcaacaatccaggtacatatgattctgaatagcttcaattggttaatctgcaatttcatcaagcacaaattatcaataactttcacatgcagtcttgagaagagggtcaataagaaagttatggcaatgtttgagaaggcagaggatgagtataatgatttgatgtcaaagaaaaacatcattgaggtgggtcttaccttttctagtgataacctaggacttactttaaaagcagcatacgtaaaccttttgttttcatctgcagaatgacaagtcaaaaatcaagacagtgatagaagagttggatgagaagaagaaagagaccttgaaagtcacatggcttaaagtaaacaagtcagtatatgaatccttctttaacttgttattgtttccagtggctgcacttgctcagactctgtatcgcggcattacttttctttgtaacagacattggtagataacctctcctttccttttgtatagggattttggatctatattcagtacacttttacctggcacaatggccaaacttgatcctcctgaaggtggtacttttttggatggtcttgaagttcgggtggcatttggaacagtttggaaacaatctttatctgaacttagtggagggcaacggtccctcctcgctcttagtcttatcctggcgctacttcttttcaaacctgcaccactttatatattagatgaggtatgtttgcatcctattacaactaccagttaccatcatccactctaatctatctggtcattggaatactgtgtgttagttttgtaataagagcttcaggtagccctgcacaggaaatgaaatcaacaataccttttcaactatccagctttaacttgcgaacatgattagtcttgctgaatttcctacacaatatggtaaagagtagggcatagtacgggttaggaagaattgctaccacatttcaagttgttactttgttggctcttcattgttaacagggttgttctcttgtaaaagctatgtcttgaactgaaagtgtctaaagggaaagagttgatgttgtggttcctatactgcaggttgatgctgccctagatctgagccatacacaaaacattggtagaatgatcaaggcgcattttccgcactcccaggtatgtgcccagcttgctccaaagatgcaatcatgtgacagttcacaattcacatccttgcacacaatttacaaatgcatatactaggcaaatttatttcatcattggagttcagggttctgaaaattggtgctactacattttcagttcatagttgtctcactaaaagagggcatgttcaacaacgcaaatgtgatattccgaacgaaatttgttgatggggtgtccactgtgacacgaacggtcccttcaaagcaaagatgattggattcattcatcacttcgtctgaaggtattctctgagctcgaaactctcttccaaacctaaagctgttaaaactatggatttgcattctcaccaaaagaaattatgaattgccataacttattattgaactgcatattgcaggaggatgaagtcgtttgttatgctctttgctaacttttctgctgatgctacccccaaagggtgtgtttggataatgggaaatgagggatgggattgggattgggaaatgaatgaagggttaggattaaatggatgagggagaatgaatggttaagatttaaagaggggtgggaaatcatttcccttagacatttgccaaacactgccaaaatgtttcaagcgcctcgcttgtcaggcccataacattaacgtgactcagtaaaatgttctagaacacccttacgttgatgcatctatctagttccctgtatgtatttgatctgacagaatgtaagattaactattacatttgtagtaaataagtgtagccttttattattagaaaattggcttgactaactggaacgtgtcg</dnaseqindica>|
| |
| − | Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001051658.1 RefSeq:Os01g0904400]|
| |
| − | }}
| |
| − | [[Category:Genes]] | |
| − | [[Category:Japonica mRNA]]
| |
| − | [[Category:Oryza Sativa Japonica Group]] | |
| − | [[Category:Japonica Genes]] | |
| − | [[Category:Japonica Chromosome 1]]
| |
| − | [[Category:Chromosome 1]]
| |
Please input one-sentence summary here.
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
