Difference between revisions of "Os06g0678800"

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(Created page with "{{JaponicaGene| GeneName = Os06g0678800| Description = Similar to Pollen-specific protein NTP303 precursor| Version = NM_001064900.1 GI:115469531 GeneID:4341847| Length = ...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os06g0678800|
 
GeneName = Os06g0678800|

Revision as of 20:27, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os06g0678800

Description

Similar to Pollen-specific protein NTP303 precursor

Version

NM_001064900.1 GI:115469531 GeneID:4341847

Length

3876 bp

Definition

Oryza sativa Japonica Group Os06g0678800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:29111462..29115337

Sequence Coding Region

29111756..29111968,29112146..29112224,29112311..29112676,29113097..29113445,29113542..29113644
,29113758..29114028,29114951..29115060,29115170..29115307

Expression

GEO Profiles:Os06g0678800

Genome Context

<gbrowseImage1> name=NC_008399:29111462..29115337 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:29111462..29115337 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggccaccattacccgcttcctcgtcttcttcttcctcctcctcgtcgtcgcggtcagaggcgacgacccttacaggttctacacctggaacatcaccttcggcgacatctaccctctcggcgtcaagcagcaggggatactgatcaacggccagttcccggggcctcagatcgacgcggtcaccaacgacaacatcatcatcaatgtcttcaacaacctgccttccccgttcctcctctcatggcaaggaattcaacagaggaggagctcatggcaagacggggtgtatggtacaaactgcccgatccctccgggtggcaatttcacttacatcatgcagttcaaggaccaaattgggagctactactactttccttcccttgcattccataaggctgctggtgggtatggtggtatcagggtccttagccgcccggggatcccggttccatttgcaccccctgctggcgatttcaccatattggccggtgactggttcaagctcaatcacactgatttgcaaggcattctggacagtggtaatgaccttccaccccctgatgggcttcttatcaatggccaaggctggaacggcaacaggtttacagtagaccaagggaaaacttaccgttttagggtatcgaatgtgggcatagcaacatcagtgaacataaggattcaaggtcattccttgctgctggttgaggtggagggatcacacaccgtgcagagcacatacacatcgattgatgtccatctaggccagtcctactcattcctcgtgacggctgatcagccaccccaggactacagcattattgtctcgacccgtttcaccaatcctgtgctcaccactactgctgtcctccactacagcaattcaaacggtgccctttctacggtagcaccacccccagcaccaacaatccagattgattggtctctcaatcaggctagatcaattcgatggaatctgacggcgagtggaccaaggccgaaccctcagggctcataccattatggccttgtcaacactacaagaaccatcagacttgcgaactcaagggctagcataaatggcaagctgagatacgcggtcaacagcgtgtccttcattccagctgacactcctctcaaggttgccgacttctacaacattcagggtgtgttcgctctggggagcatgcctgacaacccaaccggaggtggcgcctacctgcagacagcagtcatggcagccaacatgcgagactacgttgaagtcatctttgagaactctgaaaactttgtgcagtcatggcacattgacggttacgcattctgggttgtcgggatggatggaggacaatggacacctgcgagtcgccagagctacaaccttagagacgcagttgctcggtacacattacaggtgtatcctcaatcatggactgcaatttacatgcctttggataatgtggggatgtggaacatcaggtcagagagctgggctagacagtacctcggccaacaattctacctccgggtctactctccggcgaactcatggcgggacgagaacccgatcccaaagaacgcgctcctctgcggtcgggcctcggggcgccggaccaggcctctctga</cdnaseq>

Protein Sequence

<aaseq>MEATITRFLVFFFLLLVVAVRGDDPYRFYTWNITFGDIYPLGVK QQGILINGQFPGPQIDAVTNDNIIINVFNNLPSPFLLSWQGIQQRRSSWQDGVYGTNC PIPPGGNFTYIMQFKDQIGSYYYFPSLAFHKAAGGYGGIRVLSRPGIPVPFAPPAGDF TILAGDWFKLNHTDLQGILDSGNDLPPPDGLLINGQGWNGNRFTVDQGKTYRFRVSNV GIATSVNIRIQGHSLLLVEVEGSHTVQSTYTSIDVHLGQSYSFLVTADQPPQDYSIIV STRFTNPVLTTTAVLHYSNSNGALSTVAPPPAPTIQIDWSLNQARSIRWNLTASGPRP NPQGSYHYGLVNTTRTIRLANSRASINGKLRYAVNSVSFIPADTPLKVADFYNIQGVF ALGSMPDNPTGGGAYLQTAVMAANMRDYVEVIFENSENFVQSWHIDGYAFWVVGMDGG QWTPASRQSYNLRDAVARYTLQVYPQSWTAIYMPLDNVGMWNIRSESWARQYLGQQFY LRVYSPANSWRDENPIPKNALLCGRASGRRTRPL</aaseq>

Gene Sequence

<dnaseqindica>3370..3582#3114..3192#2662..3027#1893..2241#1694..1796#1310..1580#278..387#31..168#ggtggcggtggtaggtgtgagacgaggagaatggaggccaccattacccgcttcctcgtcttcttcttcctcctcctcgtcgtcgcggtcagaggcgacgacccttacaggttctacacctggaacatcaccttcggcgacatctaccctctcggcgtcaagcagcaggtaagtacatcttcttcttcttgttctgcttcagcttcagcttgttcttggagctgagcggagctgcatttgctaatggcgttgttgtgggggtgtgtgatgcttgcaggggatactgatcaacggccagttcccggggcctcagatcgacgcggtcaccaacgacaacatcatcatcaatgtcttcaacaacctgccttccccgttcctcctctcatggtaattttgcagagctttctcttcatcactctgtttaacgctgtttcacctaactttgcttgctgctccaaagtctgcctggcatgtttcgctccgtacgttgcattttctgtcttgccggagagagtgcttgtcggctcatttccagattatttctccacatttgtagattcgtagatatgtctttgccatgatcagcatgatcttcattaagctgtaattaaaccttgagatgtgtaaactctctctgtctctgtctctgagattgttccccacatgactgcactgttgctgggactgaaacgggctgtgcaagtttgaacatgtgaaaacaacatgccaattctttcaaagtttcaatcgagaacacatgtgtagatcttgattctgtaagtgcttttgcagagcttgtgatgtcactgacgtgtgagctgtcccagggcaaaatctttattgcttccttttacttgctcaactaaaagaacctgatactgtgtgtagcgtctacttacatctttccctttttttttccctttcttttatacttgtgctttcgttctcgttacagatccatgatagaaagagcatgtgtgcaactagtgcctaattgtatcagtggggcctaatatgcttcaagttgagcatgtgcagattgctgtgcttgctgggttacttttggcttcaagtgtacttgttgccaccttgaggaactaatttgagtattagaaaatttctcgtagaaggcgacggcataaaatatgttcatcttctagtagtaaaatgaaacattcatcttctattagtaaaatgaaatatgttcatcaactgttactaaaaaaaaacatctcattgacgtttcatatttggaccgtggaaatgaatacccgtgtctgtaacttacttgggtgttcatacatcgcaggcaaggaattcaacagaggaggagctcatggcaagacggggtgtatggtacaaactgcccgatccctccgggtggcaatttcacttacatcatgcagttcaaggaccaaattgggagctactactactttccttcccttgcattccataaggctgctggtgggtatggtggtatcagggtccttagccgcccggggatcccggttccatttgcaccccctgctggcgatttcaccatattggccggtgactggttcaagctcaatcacactgtaagtacatttttttatatacttaagcacaaagttcaacacctgaattgtagtttatgtatcatggtgctcactttattgcatcaccaaaaactaaacttagaattttgcaggatttgcaaggcattctggacagtggtaatgaccttccaccccctgatgggcttcttatcaatggccaaggctggaacggcaacaggtttacagtagaccaaggtaaatttatctgagtaaatcagaacaacatacctagaagtctggcgggcacttcaccattgtgtatcctgaacttgtttgatgtaatgttgccagggaaaacttaccgttttagggtatcgaatgtgggcatagcaacatcagtgaacataaggattcaaggtcattccttgctgctggttgaggtggagggatcacacaccgtgcagagcacatacacatcgattgatgtccatctaggccagtcctactcattcctcgtgacggctgatcagccaccccaggactacagcattattgtctcgacccgtttcaccaatcctgtgctcaccactactgctgtcctccactacagcaattcaaacggtgccctttctacggtagcaccacccccagcaccaacaatccagattgattggtctctcaatcaggctagatcaattcggtaagcttttgccttccttccaaaaaaaaaatcggtaagcttgtccagatttgaatagcatatgcttatttttcaataacagaattttgggaagtcaatgaaaatatactaggttcagatcataagatatgttcaagaggaccaacaaaagttaacttagtttgacaagaacattggaatttccctacacaaatgtactagcaactagtaactacaatgtttcatatttttaattacataagacctgtccatgtggttaacaatctttgtttatttggaaaaactgatttagatatcatatctagttagtacagtaacataactgaaaaactgaagttgcacaagtaactccggcatacatttctgaaggactgaaacattcctttccactcaatcccatgtttttctaactcggtacagatggaatctgacggcgagtggaccaaggccgaaccctcagggctcataccattatggccttgtcaacactacaagaaccatcagacttgcgaactcaagggctagcataaatggcaagctgagatacgcggtcaacagcgtgtccttcattccagctgacactcctctcaaggttgccgacttctacaacattcagggtgtgttcgctctggggagcatgcctgacaacccaaccggaggtggcgcctacctgcagacagcagtcatggcagccaacatgcgagactacgttgaagtcatctttgagaactctgaaaactttgtgcagtcatggcacattgacggttacgcattctgggttgtcgggtgcgtttttcattgccattcttgcaaattatgggtaggccaccggttcatgtcaatgattgaaggtgattaccatttctgaacaggatggatggaggacaatggacacctgcgagtcgccagagctacaaccttagagacgcagttgctcggtacacattacaggtatatcaatgcagatggtcattgtagatcaccatgaccacacttaatttatctgaaactgcatctagcagtatattctgatcatgtcattacaagaagcacaatagaccatatatggaaatgctccatgattgcgcaattcatatgacctgcttgcacatgatctacttttttcaggtgtatcctcaatcatggactgcaatttacatgcctttggataatgtggggatgtggaacatcaggtcagagagctgggctagacagtacctcggccaacaattctacctccgggtctactctccggcgaactcatggcgggacgagaacccgatcccaaagaacgcgctcctctgcggtcgggcctcggggcgccggaccaggcctctctgaacctgaattggggatcagtttcatgtcacgaaggggtgacagctgataaactgatgagaatcagatgagagccaaggatacatgtggtgttcagattattgagccccaattcttttgacaagcttgagaagttgagaagattgtactcctagcatcccatttctgctattcgcattgttaagcaactgtagctaaaatgttgcagcgaattctttgtatggcaagcaaggataatcttgcttcctgacatttattgatagatgatataatatcgatatccacgcatatatattg</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0678800, RefSeq:Os06g0678800