Difference between revisions of "Os06g0696400"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os06g0696400| Description = Similar to Xyloglucan endotransglucosylase/hydrolase protein 24 precursor (EC 2.4.1.207) (At-XTH24) (XTH-24) (Meristem...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os06g0696400|
 
GeneName = Os06g0696400|

Revision as of 20:28, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os06g0696400

Description

Similar to Xyloglucan endotransglucosylase/hydrolase protein 24 precursor (EC 2.4.1.207) (At-XTH24) (XTH-24) (Meristem protein 5) (MERI-5 protein) (MERI5 protein) (Endo-xyloglucan transferase) (Xyloglucan endo-1,4-beta-D-glucanase)

Version

NM_001064990.2 GI:297606416 GeneID:4341940

Length

1135 bp

Definition

Oryza sativa Japonica Group Os06g0696400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:30010216..30011350

Sequence Coding Region

30010243..30010473,30010608..30010801,30010924..30011136,30011209..30011350

Expression

GEO Profiles:Os06g0696400

Genome Context

<gbrowseImage1> name=NC_008399:30010216..30011350 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:30010216..30011350 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcctgcctggtggccattgcgcatggaggcaacttcttccaggacgcggaggtgtcgtgggggcagggccgcggcaagatcgtcgatggtggccgtgggctcgacctcacgcttgacaggagctccggctctgggttccagtccaagagcgagtacctcttcggcaagatcgacatgcagatcaagctcgtccccggcaactccgccggcaccgtcaccaccttctacttgtcgtcgcagggttcgacccacgatgagatcgacttcgagttcctggggaacgtgaccggcgagccgtacacgctgcacaccaacgtgttcacgcaggggcaggggcagcgcgagcagcagttccgcctctggttcgaccccacccagtccttccacacctactccatcatctggaacccacagcacgtcatattcgcggtggacgggacaccgatcagggacttcaagaaccacgaggcccgtggcgtggcgttccccaagagccagccgatgcgggtgtacgcgagcctgtggaacgcggacgactgggcgacgcagggcggccgcgtcaaggcggactggagcaaggcccccttcgtcgcctccttccgcgacttcaacgccgacgcctgcgtctggtcgaacggcgggtggtggaaccaggagctcagcgacatgagctaccgccgcatgaggtgggtgcagaggaagttcatgatctacaactactgcactgacgccaagcggttcccccagggcacccccgccgagtgcaagctccgttga</cdnaseq>

Protein Sequence

<aaseq>MACLVAIAHGGNFFQDAEVSWGQGRGKIVDGGRGLDLTLDRSSG SGFQSKSEYLFGKIDMQIKLVPGNSAGTVTTFYLSSQGSTHDEIDFEFLGNVTGEPYT LHTNVFTQGQGQREQQFRLWFDPTQSFHTYSIIWNPQHVIFAVDGTPIRDFKNHEARG VAFPKSQPMRVYASLWNADDWATQGGRVKADWSKAPFVASFRDFNADACVWSNGGWWN QELSDMSYRRMRWVQRKFMIYNYCTDAKRFPQGTPAECKLR</aaseq>

Gene Sequence

<dnaseqindica>28..258#393..586#709..921#994..1135#aggacggtggcgcttggcattgtggcgatggcctgcctggtggccattgcgcatggaggcaacttcttccaggacgcggaggtgtcgtgggggcagggccgcggcaagatcgtcgatggtggccgtgggctcgacctcacgcttgacaggagctccggctctgggttccagtccaagagcgagtacctcttcggcaagatcgacatgcagatcaagctcgtccccggcaactccgccggcaccgtcaccaccttctacgtaagcttatcttcctccccaaacggtctcatcacttcatcatttattcatctaccaaattcggcaaaaaaacggaactaaagtggagtaatgaagctgatggtttgtgtgatcttctgtgcttgtggctgcagttgtcgtcgcagggttcgacccacgatgagatcgacttcgagttcctggggaacgtgaccggcgagccgtacacgctgcacaccaacgtgttcacgcaggggcaggggcagcgcgagcagcagttccgcctctggttcgaccccacccagtccttccacacctactccatcatctggaacccacagcacgtcatgtgagtcccctactttacttccacattggcacgtgaacccctcttgttgttacgcgagacagagacgcatggttgatactcgatgggttttggctaaaacaacgtgttggtggtgcgtgcagattcgcggtggacgggacaccgatcagggacttcaagaaccacgaggcccgtggcgtggcgttccccaagagccagccgatgcgggtgtacgcgagcctgtggaacgcggacgactgggcgacgcagggcggccgcgtcaaggcggactggagcaaggcccccttcgtcgcctccttccgcgacttcaacgccgacgcctgcgtctggtcgaacggcgcgcagcgctgccccgtcggcacaatggagaccgtcgcagcgccggccggcggcaggaggggcggcgccggcgggtggtggaaccaggagctcagcgacatgagctaccgccgcatgaggtgggtgcagaggaagttcatgatctacaactactgcactgacgccaagcggttcccccagggcacccccgccgagtgcaagctccgttga</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0696400, RefSeq:Os06g0696400