Difference between revisions of "Os09g0520600"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os09g0520600| Description = Bile acid:sodium symporter family protein| Version = NM_001070236.1 GI:115480214 GeneID:4347609| Length = 3320 bp| ...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os09g0520600|
 
GeneName = Os09g0520600|

Revision as of 21:02, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os09g0520600

Description

Bile acid:sodium symporter family protein

Version

NM_001070236.1 GI:115480214 GeneID:4347609

Length

3320 bp

Definition

Oryza sativa Japonica Group Os09g0520600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:21079828..21083147

Sequence Coding Region

21080229..21080294,21080660..21080742,21080825..21081078,21081238..21081490,21081582..21081775
,21082257..21082387,21082513..21082616,21082947..21083067

Expression

GEO Profiles:Os09g0520600

Genome Context

<gbrowseImage1> name=NC_008402:21079828..21083147 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:21079828..21083147 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcccccaacgccgccgtcctggtgcggccccacatcgccggcgtccaccatctgcccaccggccggcgactgccccgtctggctcctccccaggcggtctcgccgccgttttcacggcagaagggatctgtagtggctgcgagtggacgtgtctgggcgagtgcgagtggttcgtttgagaaagatcgcattggagatgacgatgtgttagcttcgccgcagatagtggaggagagcaaagtcgatttgctgaagattctgaagagtgccaacaccattattccccacgtagtgctggggagcacaattcttgctctggtgtacccaccttcttttacatggttcacaactagatattatgcaccagcattgggattcttgatgtttgcagtgggtgtaaactcaagtgttaaggatttcattgaggctatacaaagaccagatgctatagctgctggctatgttggacaatttattatcaagcctttcttaggattcctttttggcactcttgcagttacaattttcaatcttcctactgctttaggtgctggtatcatgttggtttcatgtgtgagtggagcacaactatcaaactatgcaacgtttctgacagatccacatatggcccccctcagcattgttatgacatcattgtcaacagctactgccgtttttgtcaccccaactttatcctactttcttattggcaagaaattaccggtggatgtgaaagggatgatgtccagtattgttcaaatagtggttgctccaattgctgccggattgcttctgaatagatatcttccgcggctctgttcagctattcagccatttctccctccactatcggtatttgtgactgctttatgtgttggttcaccattggccataaatattaaggctgttttgtccccatttggactagccacagtgcttctcctttttgcattccatacatcatcttttatagctggatatcatcttgctggtacttggtttcgcgagtcagcagatgtaaaggcactacaaagaacagtatcttttgagacaggaatgcaaagtagccttcttgctcttgctttagcaaacaggttcttcccagacccactagtgggagtgcccccggctatatcagttgtgctgatgtccctaatggggtttgctcttgttatggtgtggtccaagagaacaaaagaatag</cdnaseq>

Protein Sequence

<aaseq>MAPNAAVLVRPHIAGVHHLPTGRRLPRLAPPQAVSPPFSRQKGS VVAASGRVWASASGSFEKDRIGDDDVLASPQIVEESKVDLLKILKSANTIIPHVVLGS TILALVYPPSFTWFTTRYYAPALGFLMFAVGVNSSVKDFIEAIQRPDAIAAGYVGQFI IKPFLGFLFGTLAVTIFNLPTALGAGIMLVSCVSGAQLSNYATFLTDPHMAPLSIVMT SLSTATAVFVTPTLSYFLIGKKLPVDVKGMMSSIVQIVVAPIAAGLLLNRYLPRLCSA IQPFLPPLSVFVTALCVGSPLAINIKAVLSPFGLATVLLLFAFHTSSFIAGYHLAGTW FRESADVKALQRTVSFETGMQSSLLALALANRFFPDPLVGVPPAISVVLMSLMGFALV MVWSKRTKE</aaseq>

Gene Sequence

<dnaseqindica>2854..2919#2406..2488#2070..2323#1658..1910#1373..1566#761..891#532..635#81..201#gtctctttcgctgcgttgcgtcatcagctctgaaactctgaaaccaaaacccacccaccctcgcggtcgccggcgctcgaatggcccccaacgccgccgtcctggtgcggccccacatcgccggcgtccaccatctgcccaccggccggcgactgccccgtctggctcctccccaggcggtctcgccgccgttttcacggcgtaggtgctctgcttgatccgatctgaaatatcccctttttatagctgtgtgggttggcgattaaggaggattggagttggaggtcgttggggggggggggggggggctaatagtcttaagaaactcttgttcatatctttgattcacctttggttggtggcataaaaaatgtaaagttttgaatttatttcttttccttttataaattcggtatgatgtctgtctttccatcaaaagcttactgctttggttagaagtttaatgttttgtgctcaaaagatagcacaatcgtagtggttctcatgttctttattaattgaagcaagcagagaagggatctgtagtggctgcgagtggacgtgtctgggcgagtgcgagtggttcgtttgagaaagatcgcattggagatgacgatgtgttagcttcgccgcaggtgccatcctgatgctgttttttcaatgctctagttagtgagcttttgtatcagtttactactatttgctactatttgggtattcacttggtgcttgattaatggcttggagtaaccttttacagatagtggaggagagcaaagtcgatttgctgaagattctgaagagtgccaacaccattattccccacgtagtgctggggagcacaattcttgctctggtgtacccaccttcttttacatggttcacaactaggtcagtcttgcttgtgtgttttaagttgaacttaattcagttcttgacctgaataacaggtgtttgtgtgttactttctcatcagctagttgcgctgatatttctgggctgtactttcagtgaaatgaagctctattcactaatcgctgactagttacatgatgaccagttaggtagattcagatatcgaagtatatgtgtagtactactgaattatatccagttgatctttgggtgacaaaaaacacccttgaaacatagtatgcttaattgctgatcattcatgtatgttgataaaggccattgttgatttatacgagagtgagtataacagagaagggatgtagctgtgattgctgtatcatgtcatttctgctactgatactttatatatgcactcgcaatgctattcttatttgattgttaatttgttcacatttgactttattattacattctcactgtgtcattgactgggcagatattatgcaccagcattgggattcttgatgtttgcagtgggtgtaaactcaagtgttaaggatttcattgaggctatacaaagaccagatgctatagctgctggctatgttggacaatttattatcaagcctttcttaggattcctttttggcactcttgcagttacaattttcaatcttcctactgctttaggtaggggagttgaatttatcctagtatttattatgcttacatgagaaatattgatggttatatagagaactctgaattggtcttttttcaggtgctggtatcatgttggtttcatgtgtgagtggagcacaactatcaaactatgcaacgtttctgacagatccacatatggcccccctcagcattgttatgacatcattgtcaacagctactgccgtttttgtcaccccaactttatcctactttcttattggcaagaaattaccggtggatgtgaaagggatgatgtccagtattgttcaaatagtggttgctccaattgctgccggattgcttctgaataggtatttattttggtctgaaagtatatgtcaccctgttctacatcttacagttacttatacgcatactatatgtttttgatatttgcaaccttattagtatgcattcatttaagagtatttattaatgtgtttaacttcttgtttcttgatgatatgaagatatcttccgcggctctgttcagctattcagccatttctccctccactatcggtatttgtgactgctttatgtgttggttcaccattggccataaatattaaggctgttttgtccccatttggactagccacagtgcttctcctttttgcattccatacatcatcttttatagctggatatcatcttgctggtacttggtttcgcgagtcagcagatgtaaaggcactacaaagaacagtatcttttgagacaggtaatatacagtttcttgttggattaggatatgctatttgcaatttcttctgttgtctcactatcacatatatgtcatacaggaatgcaaagtagccttcttgctcttgctttagcaaacaggttcttcccagacccactagtgggagtgcccccggctatatcagtatgtctacttttcctcacctgttgcttatttgcttttatctcaggagtcaaccattaattcttagtcttgtactggtttatcttgtctgatgcgacctacgtgatttccatctagggaacagatatgagttttatgcgacctacgtgatttccatctagggaacagatatgagtttttatatatagttgtcccaaaatctcagaactgtttcatgcaaaagatgtgtttcgcaaatgtgttttgacacaattaatatttcagatttcagttcttatgtatctagaaatcgatttgagcacaacttcaaatcctgtatcttacacctgaaaaattgctaaactgatttctacttttctctgcaggttgtgctgatgtccctaatggggtttgctcttgttatggtgtggtccaagagaacaaaagaatagctcatattgaactattaaagtcagtcagctacagagcagtgttcagtattaacagtgatgtacgctcttctaaaatcaccatgaagaacagccaatcacaaaattggaggtgaggacggcagatgtttgatggctaagatacaaactcttccagtgccaataaaccatgtacaccattgctctgaatccttctcgctttctttcgccgtggtactcttttcttgttcctgttctgaacttaaccaagacctcaagttgtccaagtgcagctaggattataaagttgtccaagtgcagctaggattataagcatttatgtgaaaggatctctgtaacatttattcagtataaggagaaaaagtggaggaagaagtaggaaacaacaggtctttgaatttcct</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0520600, RefSeq:Os09g0520600