Difference between revisions of "Os06g0728000"

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(Created page with "{{JaponicaGene| GeneName = Os06g0728000| Description = HMG1 protein (HMGB1)| Version = NM_001065175.1 GI:115470081 GeneID:4342129| Length = 1841 bp| Definition = Oryza sa...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os06g0728000|
 
GeneName = Os06g0728000|

Revision as of 20:29, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os06g0728000

Description

HMG1 protein (HMGB1)

Version

NM_001065175.1 GI:115470081 GeneID:4342129

Length

1841 bp

Definition

Oryza sativa Japonica Group Os06g0728000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:31870282..31872122

Sequence Coding Region

31870518..31870561,31870681..31870794,31870874..31870931,31871089..31871133,31871233..31871313
,31871401..31871511,31871810..31871830

Expression

GEO Profiles:Os06g0728000

Genome Context

<gbrowseImage1> name=NC_008399:31870282..31872122 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:31870282..31872122 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaagggggccaaatccaagggcgccgccaagcccgacgccaagttggctgtgaagagtaagggcgcggagaagcccgccgccaagggcaggaaggggaaggccggcaaggaccccaacaagcccaagagggctccctccgctttcttcgtttttatggaggagttccgtaaggagttcaaggagaagaaccccaagaataaatctgtcgctgctgtaggaaaagcagccggtgataggtggaaatccctgaccgaagcggacaaggctccctatgtagccaaggccaacaagctcaaggccgagtacaacaaggccattgctgcctacaacaagggcgagagcactgccaagaaggcacccgccaaggaggaagaggaggacgacgaggaggaatctgacaagtccaagtccgaggtcaatgatgaggatgacgacgagggcagcgaagaggatgaagacgatgacgagtga</cdnaseq>

Protein Sequence

<aaseq>MKGAKSKGAAKPDAKLAVKSKGAEKPAAKGRKGKAGKDPNKPKR APSAFFVFMEEFRKEFKEKNPKNKSVAAVGKAAGDRWKSLTEADKAPYVAKANKLKAE YNKAIAAYNKGESTAKKAPAKEEEEDDEEESDKSKSEVNDEDDDEGSEEDEDDDE</aaseq>

Gene Sequence

<dnaseqindica>237..280#400..513#593..650#808..852#952..1032#1120..1230#1529..1549#gcttccttctctcctctcctcttctcttctcttctctggtggtgtgggtgtgtccctgtctcccctctccttcctcctctcctttcccctcctctcttcccccctctcacaagagagagagcgccagactctccccaggtgaggtgagaccagtctttttgctcgattcgacgcgcctttcacgccgcctcgcgcggatctgaccgcttccctcgcccttctcgcaggattcagccatgaagggggccaaatccaagggcgccgccaagcccgacgccaagtaataatcaatctattctcatctccctttaacatctctattctatgttcacgccgtcgcagatctgttgattttcgccgccgcagattagattttgacttgatttttgttggttgcaggttggctgtgaagagtaagggcgcggagaagcccgccgccaagggcaggaaggggaaggccggcaaggaccccaacaagcccaagagggctccctccgctttcttcgtttttatgtcagaccacttccccgattttcttctgccttcttttttttttttggaggggattttcgtttgatcttgtttcgctcagggaggagttccgtaaggagttcaaggagaagaaccccaagaataaatctgtcgctgctgtaagtttttcttttttgtttcccctctcgttcgtaaataaaaactccactactagagtctctggcttacaattacaattattattattagttgcaccgcttattagatgttgtatcatgattcgtggattttattttttcaaaacaaaaaattcaggtaggaaaagcagccggtgataggtggaaatccctgaccgaagcggtgagtttcgtctcgtcgcacatagagatagtatgatttatttaagtgttagattccttgtgcccaagcttatatgtagccatggctgtttgattctaggacaaggctccctatgtagccaaggccaacaagctcaaggccgagtacaacaaggccattgctgcctacaacaagggcgaggtataaacaactagattaccttgtatgcttgccaccgcgtccaatttgtttattgttctaaacatatgctctggtttgtttgttcagagcactgccaagaaggcacccgccaaggaggaagaggaggacgacgaggaggaatctgacaagtccaagtccgaggtcaatgatgaggatgacgacgagggcagcgaagaggtactacatacataatccttgtgatcaattcagaaaatagtatcgcattagttcgttgtgtgaagcttagctgactatgcctgaggcttgtacgattaggagtacgattcacactttgattaggctaatgcctcatgggtagatatagaacaatagttagtttgagagatgtatacaaataggctaatgtctcatgggtagacagaagaacaaataggtagtttgaaagatgtattttcaagtgtgacattctcaaaacggaaactgatgaaattaaaaatggttttggggattgcaggatgaagacgatgacgagtgagccttccagtggacaagatgggagcagcaagacgctaagggcggcgggcgtcctaaggagcctatccatcatcatcatcgtctactagaattattcagtttcacttcacatcgtgatgttttactttttctctcgtcctataacggatagcgctccttgttggcgccactggtgggtgttgtggtgcagccaatgtcttgtctccaccgtcaatgatccgcttgtacctagattactctttccattgtcatcggctaacattgtgataatatcagtttgcgtatgttagatt</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0728000, RefSeq:Os06g0728000