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| Line 20: |
Line 20: |
| | | | |
| | ==Structured Information== | | ==Structured Information== |
| − | {{JaponicaGene|
| + | [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 3]] |
| − | GeneName = Os03g0330300|
| |
| − | Description = Viral attachment protein, fibre shaft repeat containing protein|
| |
| − | Version = NM_001056544.1 GI:115452816 GeneID:4332729|
| |
| − | Length = 5572 bp|
| |
| − | Definition = Oryza sativa Japonica Group Os03g0330300, complete gene.|
| |
| − | Source = Oryza sativa Japonica Group
| |
| − | | |
| − | ORGANISM Oryza sativa Japonica Group
| |
| − | Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
| |
| − | Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
| |
| − | clade; Ehrhartoideae; Oryzeae; Oryza.
| |
| − | |
| |
| − | Chromosome = [[:category:Japonica Chromosome 3|Chromosome 3]]|
| |
| − | AP = Chromosome 3:12201822..12207393|
| |
| − | CDS = 12202168..12202235,12202332..12202412,12202775..12205221,12205514..12205666,12205748..12205782<br>,12205875..12205909,12206506..12206539,12206639..12206750,12206828..12207013<br>,12207280..12207350|
| |
| − | GCID = <gbrowseImage1>
| |
| − | name=NC_008396:12201822..12207393
| |
| − | source=RiceChromosome03
| |
| − | preset=GeneLocation
| |
| − | </gbrowseImage1>|
| |
| − | GSID = <gbrowseImage2>
| |
| − | name=NC_008396:12201822..12207393
| |
| − | source=RiceChromosome03
| |
| − | preset=GeneLocation
| |
| − | </gbrowseImage2>|
| |
| − | CDNA = <cdnaseq>atggagggggcggttgctagcaatgtggagcttgattctgcagtcttccaagtatcctcagcccagaacagatacgaggcaattgcttgcagtaaagggaatacagaattgattgcatctggtccttttgatcaattagtcctgcacttggaagatgctaggaagttccaatcgtgttcaacagctggcacttttaagctgtcgttgtctgggaatgcaaaaggatcttcctggttcacaaaatccaccatagcacggttcctgaataccataaattcaccagatgcctcaaaatctgcaaatggaattttacatgaaatctcacaactggaggaaactagaaagtttcatcaatctctctattctaaggaacaacgaaatcctatgggtggtgctttatccggaggtgtctttggtaccattggcgtagaacaacagggaaatgttggcccaaactcatctgaagcaacaaagaatgaattgcttcgagctctggatttgaggttgactgtactgaaagaggagatctttgcgttgttgaatagagcagtcgtttccaatatgtcaactagagatgtatctgatttatcctcatttgttcagcacttcggtgcatcagagttcagctggttgatgcggtgcctactgttgatcccagactgccaaccctctgaggtctcccaacagcagtctttccctgccgagaaagatgacaagggagaaaatgcacttcatactcgtaatatcagctctcataccattatccagaggcctattaccaacaatgtttccccagcaaagcttgctcaaattgagcgtgaaagctcaactgaaagtgatgattcttctgagtccagtgctgaagatgaggctgtcgttgaaagaagccggccactcatgaggtctgcttcacctaggagatctgcttctccaatgcgaagggttcaaattggtagatcaggatctcgtaggtcaacagcgattgccatcaagagtctcagctatttcccccctagtcaaagaattcctttggataaagatgatgaaagtggcagttgcaatggtgaaactgaccagccttcaaggaaatctgacaataatgtaagaaggatgagtgtgcaggatgcaataaatctcttcgaaagcaagcagaaggatcagaatccggattcgcaaaataagaaagctggcttgtttgctacaaagtcagtactaagaaggtggagtgcaggaatgggtgattccttgaacaataattcagaagaaaaaaccatagattccacatcccaaagtaaatccaacaatacaggatccgattcagagaaggatggagctgaaacacaggctgagccaggttcagcttcagcttctaacactgttgttacgccttctgttgaaggttttcacactaatatgcaaggtgttgcaatgccagaaacagagacagcggtttcatcccatactgaaatttctgctgagcagacaaagtcagggcaagaggaaaacagtgatcgggcaatggcctctgctgagtggaaccgccagaaggaagctgagcttaatcagatgttaatgaaaatgatgcaagtcatgcctggaaagttttcgagtgctaatgtcaccactactggcatcacttccacaaatgagaagaaaggtggactgcaaggtcagcataaagagaagcgagactcgaaagttcgaaccgataaaggtggaaggcggccagcaaaggaggcaagcactaggcccttgaaggaaacagttgggcagaagaaggcagcaattacccccaaaactggcactgcagctgagaaacgcaattctccagttccacaaagggcacggagaaattcatcacctccggtcctaccaaaagaattgaccccaaaagcgcctgccagaaagagctcacccaaaccatcacctgcacctgtgacccgcagttcatggtcaggtggatctttgactaaagcaactactgcacagaaaactaaaagctctcctgggacagtttcagcaccgacagcaactagtcggagaaggactccagtagcaccctcatcttctcaaccaacttcaaaggtggaaagaagtgctcaaccggtgaagaacaaaaaggaaacagttgctgcttcaaagccagcaattaagggaattgaagaaaagaagactaaaacagcaacaaagacaagcaggctagctaaaagtacacctatttcagatgaaaaatcaagtgcagcaactaggccaaacttgtataacaaggttgcaaagaagagcagtgttgtaccgctagaatcaaaaccatcaaagaaagctactgggattagtcaaagtgctggtactgatgctgtgaagagtaagatgccacaacttgatgactcttccaatgacattggaaatattacccaagctgaagataaggagcactctgctgtgacaacccagccaaaaactactaaggtattggaggctgatcttgctcaaccagcacatgatgttgatgaaaatttagaaatttcgctcgataatgacttaaatattgaaaaaacagaaaattcggccccaagtttagctacaacagaaatggactccagtgaacaggttgaacctcacactgaggttcaaccacctcctgaagaggacatgggcatctcatcagctgcctgggtagaggtagagcatgaagaagttactgatgtgggtgaaaatgtagtgcctgaggatgtcacctcaccatcaattgagcccttgccatcttcaagccctagaatccgtcactcattgtcacaaatgctgcaagcagatagcaatgagccggaaattattgagtggggaaatgctgaaaacccacctgcaatagtttttcataaagattctccaaagggattaaagaggcttctaaagtttgcgcgtaaaaataaaggagacagcaacagtaatggttgggcgagcccatctgttgtttctgaaggagaagatgaacttgaagaaccacgaggtggtaatgaaggtgtaaattcgagcaggagaacatttgatggccccaagactaacagcatcttatcagctcaatcaaccaccggcagcttcaactcaacgaattcagacaggttacgggataggcctggagctgccccatcaactaaatcgtcaaggtcgttcttctccctatcaaacttccggagcagcagatcaaacgagtcgaagctcagatag</cdnaseq>|
| |
| − | AA = <aaseq>MEGAVASNVELDSAVFQVSSAQNRYEAIACSKGNTELIASGPFD QLVLHLEDARKFQSCSTAGTFKLSLSGNAKGSSWFTKSTIARFLNTINSPDASKSANG ILHEISQLEETRKFHQSLYSKEQRNPMGGALSGGVFGTIGVEQQGNVGPNSSEATKNE LLRALDLRLTVLKEEIFALLNRAVVSNMSTRDVSDLSSFVQHFGASEFSWLMRCLLLI PDCQPSEVSQQQSFPAEKDDKGENALHTRNISSHTIIQRPITNNVSPAKLAQIERESS TESDDSSESSAEDEAVVERSRPLMRSASPRRSASPMRRVQIGRSGSRRSTAIAIKSLS YFPPSQRIPLDKDDESGSCNGETDQPSRKSDNNVRRMSVQDAINLFESKQKDQNPDSQ NKKAGLFATKSVLRRWSAGMGDSLNNNSEEKTIDSTSQSKSNNTGSDSEKDGAETQAE PGSASASNTVVTPSVEGFHTNMQGVAMPETETAVSSHTEISAEQTKSGQEENSDRAMA SAEWNRQKEAELNQMLMKMMQVMPGKFSSANVTTTGITSTNEKKGGLQGQHKEKRDSK VRTDKGGRRPAKEASTRPLKETVGQKKAAITPKTGTAAEKRNSPVPQRARRNSSPPVL PKELTPKAPARKSSPKPSPAPVTRSSWSGGSLTKATTAQKTKSSPGTVSAPTATSRRR TPVAPSSSQPTSKVERSAQPVKNKKETVAASKPAIKGIEEKKTKTATKTSRLAKSTPI SDEKSSAATRPNLYNKVAKKSSVVPLESKPSKKATGISQSAGTDAVKSKMPQLDDSSN DIGNITQAEDKEHSAVTTQPKTTKVLEADLAQPAHDVDENLEISLDNDLNIEKTENSA PSLATTEMDSSEQVEPHTEVQPPPEEDMGISSAAWVEVEHEEVTDVGENVVPEDVTSP SIEPLPSSSPRIRHSLSQMLQADSNEPEIIEWGNAENPPAIVFHKDSPKGLKRLLKFA RKNKGDSNSNGWASPSVVSEGEDELEEPRGGNEGVNSSRRTFDGPKTNSILSAQSTTG SFNSTNSDRLRDRPGAAPSTKSSRSFFSLSNFRSSRSNESKLR</aaseq>|
| |
| − | DNA = <dnaseqindica>5159..5226#4982..5062#2173..4619#1728..1880#1612..1646#1485..1519#855..888#644..755#381..566#44..114#ttgagcaattagtccgttgtcagggttgtaacttgtaagcaacatggagggggcggttgctagcaatgtggagcttgattctgcagtcttccaagtatcctcagcccagaacaggtgattcttgctaagatattttttggctatagctgtttaatgttcctatctgtttctccaagaattgggctcaacaaatttacatacgatgcattttattcctctcctctataatggactttccgttttcctttctgcgttaggtttgaaatgggaattttgtacatgatgtgctgatgattgctcaagtcttttgtgattcacaatttcctttaatgaaaatatgaacctcaccctgcagctctctcaaatatttttttctacagatacgaggcaattgcttgcagtaaagggaatacagaattgattgcatctggtccttttgatcaattagtcctgcacttggaagatgctaggaagttccaatcgtgttcaacagctggcacttttaagctgtcgttgtctgggaatgcaaaaggatcttcctggttcacaaaatccaccatagcacggtatctgcaatcaacatttttctagtttttatgtttctccttgcagagaccatgacataattggatcccccttacaggttcctgaataccataaattcaccagatgcctcaaaatctgcaaatggaattttacatgaaatctcacaactggaggaaactagaaagtttcatcaatctctctattctaaggtatcacaactcttcccgtaaaatacccatagtttttagtcacgacgacctgaacatttcaacgtagatgccattataatgagcatttatcttttgtaggaacaacgaaatcctatgggtggtgctttatccggtacattgaaagaaatatttggtcatccattgctctgctctgtcttacttgaatgtccttacaacctttaaatgcacatgtgcacctagactcaacatactacaatctatgctagattgcatttaccattttagtaccagtttggcttgatcgttcagacttttactagcaatggtagtattcctagttgagattatcttttgctgacccttagagtagattaattgttctctagttgagattatcaatgattattttgcttgtagttaacagcaatagttgtcagcaaaaaaatctgagaataatccatccttctataagattctgttaatttgttgtcggtacatttgcaatctaaagtaaccatgtatgcctcaaggtcctcaacaagtactcaaaagtgttaatttattgtagtatgttgataaagcataccttcctttaggaagtctcttaacaagggcagaggattttctgttagaagctatttgtttgagtaggggaattttagttgaattctctaattattgtatcaagcttcaatggcccttaaaattttatgctcactttattgcaatatttaatcatctttgcaggaggtgtctttggtaccattggcgtagaacaacaggtgaactgcttttcatttctgcaagatctgaaccagctttatggttttgtattattttaagtcttacatttcattcttaaaatacctttcagggaaatgttggcccaaactcatctgaagcaacaaagtaaacctttttcttctttttttttttgctactttatcttgcccttcttttagctgacgatctatatgattactatgctaggaatgaattgcttcgagctctggatttgaggttgactgtactgaaagaggagatctttgcgttgttgaatagagcagtcgtttccaatatgtcaactagagatgtatctgatttatcctcatttgttcagcacttcggtgcatcagagttcaggtatggtccatgagcattgtgcatgcagggttcaaggccactgttttttctactaaaaataagtgtaaatgccaaaaagtgttacttagtaggtcaaataactatcctatattcatcgataagtccacttatttataattctgtcattatttggaagaaaactgacctacctgatcacttggaaataacgtgcttttttaagactgtatgttacatcctcatcactgaaattatgtattgtttcttttaattcatgtatcaagaattaactgctgtttttcttgtttgttagctggttgatgcggtgcctactgttgatcccagactgccaaccctctgaggtctcccaacagcagtctttccctgccgagaaagatgacaagggagaaaatgcacttcatactcgtaatatcagctctcataccattatccagaggcctattaccaacaatgtttccccagcaaagcttgctcaaattgagcgtgaaagctcaactgaaagtgatgattcttctgagtccagtgctgaagatgaggctgtcgttgaaagaagccggccactcatgaggtctgcttcacctaggagatctgcttctccaatgcgaagggttcaaattggtagatcaggatctcgtaggtcaacagcgattgccatcaagagtctcagctatttcccccctagtcaaagaattcctttggataaagatgatgaaagtggcagttgcaatggtgaaactgaccagccttcaaggaaatctgacaataatgtaagaaggatgagtgtgcaggatgcaataaatctcttcgaaagcaagcagaaggatcagaatccggattcgcaaaataagaaagctggcttgtttgctacaaagtcagtactaagaaggtggagtgcaggaatgggtgattccttgaacaataattcagaagaaaaaaccatagattccacatcccaaagtaaatccaacaatacaggatccgattcagagaaggatggagctgaaacacaggctgagccaggttcagcttcagcttctaacactgttgttacgccttctgttgaaggttttcacactaatatgcaaggtgttgcaatgccagaaacagagacagcggtttcatcccatactgaaatttctgctgagcagacaaagtcagggcaagaggaaaacagtgatcgggcaatggcctctgctgagtggaaccgccagaaggaagctgagcttaatcagatgttaatgaaaatgatgcaagtcatgcctggaaagttttcgagtgctaatgtcaccactactggcatcacttccacaaatgagaagaaaggtggactgcaaggtcagcataaagagaagcgagactcgaaagttcgaaccgataaaggtggaaggcggccagcaaaggaggcaagcactaggcccttgaaggaaacagttgggcagaagaaggcagcaattacccccaaaactggcactgcagctgagaaacgcaattctccagttccacaaagggcacggagaaattcatcacctccggtcctaccaaaagaattgaccccaaaagcgcctgccagaaagagctcacccaaaccatcacctgcacctgtgacccgcagttcatggtcaggtggatctttgactaaagcaactactgcacagaaaactaaaagctctcctgggacagtttcagcaccgacagcaactagtcggagaaggactccagtagcaccctcatcttctcaaccaacttcaaaggtggaaagaagtgctcaaccggtgaagaacaaaaaggaaacagttgctgcttcaaagccagcaattaagggaattgaagaaaagaagactaaaacagcaacaaagacaagcaggctagctaaaagtacacctatttcagatgaaaaatcaagtgcagcaactaggccaaacttgtataacaaggttgcaaagaagagcagtgttgtaccgctagaatcaaaaccatcaaagaaagctactgggattagtcaaagtgctggtactgatgctgtgaagagtaagatgccacaacttgatgactcttccaatgacattggaaatattacccaagctgaagataaggagcactctgctgtgacaacccagccaaaaactactaaggtattggaggctgatcttgctcaaccagcacatgatgttgatgaaaatttagaaatttcgctcgataatgacttaaatattgaaaaaacagaaaattcggccccaagtttagctacaacagaaatggactccagtgaacaggttgaacctcacactgaggttcaaccacctcctgaagaggacatgggcatctcatcagctgcctgggtagaggtagagcatgaagaagttactgatgtgggtgaaaatgtagtgcctgaggatgtcacctcaccatcaattgagcccttgccatcttcaagccctagaatccgtcactcattgtcacaaatgctgcaagcagatagcaatgagccggaaattattgagtggggaaatgctgaaaacccacctgcaatagtttttcataaagattctccaaagggattaaagaggcttctaaagtttgcgcgtaaaaataaaggagacagcaacagtaatggttgggcgagcccatctgttgtttctgaaggagaagatgaacttgaagaaccacgaggtggtaatgaaggtgtaaattcgagcaggagaacatttgatggccccaagactaacagcatcttatcaggtacattttctaccatgagagggcattttttctgcagccagtatagctataggagaaatctgaatatagagtacaagctttagtttttgagctgctctgatttcaccatttaacagcgcatgatgacagtaggtagaaatgcatttccaattcccacatgtttatacacacttaagtgaagtaactgaggtcacaacattattgtttcacaagagtaccaagcaccttttttaaaagaacttgtctgcagcgaagatttatgggatgcttctgaaatggaagagcagattatctttcatgcttgctcacattgtgtttatatttatttcctttctatttcaactatgcttattcttccccagctcaatcaaccaccggcagcttcaactcaacgaattcagacaggttacgggataggcctggagctgccccatcaactaaatgttagttcttgcaaacatagtatcgtcatcacttgcattatgattataataaactgcagccatctctaatacatctttgctaccttgtacttccagcgtcaaggtcgttcttctccctatcaaacttccggagcagcagatcaaacgagtcgaagctcagatagcatgccatgttctccaggagatacatggataattggatagtcgatcccttccagtttggaggtcaactgatgtaaaaaaaaagagatggtttgagattgattgattgttcggacggagccagcttgttgtgtttggttctgggttttctgcaatttgatatagtctctgcgtctaatgtcatactcaacctctcacctttcttgtacatcttttcactttttaacagttgctggaactgcaagcttatttggatccggtcgatgttagggaaactggtgctaatgtaaagtgcatagcgtgagcctgaggtgctcacagccgattgcgatgcccgaacttgatctg</dnaseqindica>|
| |
| − | Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001056544.1 RefSeq:Os03g0330300]|
| |
| − | }}
| |
| − | [[Category:Genes]] | |
| − | [[Category:Japonica mRNA]]
| |
| − | [[Category:Oryza Sativa Japonica Group]] | |
| − | [[Category:Japonica Genes]] | |
| − | [[Category:Japonica Chromosome 3]]
| |
| − | [[Category:Chromosome 3]]
| |
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Annotated Information
Function
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Expression
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Structured Information
