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| Line 20: |
Line 20: |
| | | | |
| | ==Structured Information== | | ==Structured Information== |
| − | {{JaponicaGene|
| + | [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 3]] |
| − | GeneName = Os03g0335600|
| |
| − | Description = Similar to Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase) (ValRS)|
| |
| − | Version = NM_001056571.1 GI:115452870 GeneID:4332758|
| |
| − | Length = 10217 bp|
| |
| − | Definition = Oryza sativa Japonica Group Os03g0335600, complete gene.|
| |
| − | Source = Oryza sativa Japonica Group
| |
| − | | |
| − | ORGANISM Oryza sativa Japonica Group
| |
| − | Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
| |
| − | Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
| |
| − | clade; Ehrhartoideae; Oryzeae; Oryza.
| |
| − | |
| |
| − | Chromosome = [[:category:Japonica Chromosome 3|Chromosome 3]]|
| |
| − | AP = Chromosome 3:12473145..12483361|
| |
| − | CDS = 12476475..12476493,12476577..12476804,12476930..12477123,12477530..12477700,12477839..12478141<br>,12478238..12478295,12478453..12478532,12478640..12478723,12479685..12479762<br>,12480305..12480388,12480467..12480532,12480683..12480755,12480855..12481024<br>,12481143..12481216,12481407..12481443|
| |
| − | GCID = <gbrowseImage1>
| |
| − | name=NC_008396:12473145..12483361
| |
| − | source=RiceChromosome03
| |
| − | preset=GeneLocation
| |
| − | </gbrowseImage1>|
| |
| − | GSID = <gbrowseImage2>
| |
| − | name=NC_008396:12473145..12483361
| |
| − | source=RiceChromosome03
| |
| − | preset=GeneLocation
| |
| − | </gbrowseImage2>|
| |
| − | CDNA = <cdnaseq>gaaaacgttagaacggaaactgaggaaaaatcagaagtgttatgcttgcaggctaaagagaaagaagagaaaagacttaaagcaaaacaaaaggaggcagctatgcttcaggcacagccagctttagatgtactcaagaaggttgagaagaaacataggggaaaagctgtggaggatgaaaatcctgaagattttattgatcaagacactcctaatgggcagaagaaactgcttgcacctcaaatggccaatcagtattgcccaagcacggttgagaaatcatggtatgcctggtgggaatcatcaggatattttagggcagattctgcaagcacaaagccaccatttgttatagttatgccacctccaaatgtgactggagctcttcacataggccatgctcttacagtggctatagaggatgcgatgatacgatggcggaggatgtcaggttataatgctctatgggtccctggagtggaccatgctggcattgctacacaggttgtagtagaaaaaaagcttatgcgtgaaaggaatctgacaaggcatgacatagggcctgacaattttgtttgtgaagttctcaaatggaaagagcggtatggtggtactatattgaatcaattgcaccgccttggggcctcacttgattggtctcgtgaggcttttacaatggatgagcaaaggtcaaatgctgtaactgaagcttttgtaaggttacacaaggaaggcctgatatatagagataaccgccttgtgaattgggactgcacacttctgacttcaatttctgagatagaggttgatcatattgatcttaaagaagaaacaatgttaaagatccctggttatgctactcctgtacaatttggtgtgttgatatcttttgcctatcctcttgaagaagggctaggtgagattgttgttgcaacaactcgaattgaaacaatgcttggtgatacagcaatagctgttcatcctgaggataaaaggtatatgcatctgcatggacggtatgcagtccaccccttcaatggccgaaaactcaaaataatctgtgatgctgagatagttgatcccagtttcggtactggggctgtcaagattgcacctgcacatgacccaaatgactttgaggttggaagacggaataaccttcagttcattaatatcttgacagatgatgggaaaataaacagcaatgggggtgcacaatttgaaggaatgccaagattcactgctcgaatttgcattattgaagcactgaaggcaaagggcttgtacaagggtgcaaagaataccgaaacgagtttgggcatttgttcaagaactaacgacatagtggagcctatgataaaatccccgcagtggtttgttaattgtaacaccatggccaaggtagcccttgatgctgtaaggtctaagaggattgagatcattcccccgcagtacgaacaagactggtatagatggcttgaaaatatacgtgattggtgtgtttcaaggcaacattggtggggacaccgtgtacctgcatggtatgtgacactagaagatgaccaggagaaaactctaggttctgacaatgaccgctggatagtcgccaaaagtgaaagtgctgcaagcgttgaggcacagaaaagttatccaggaaagaaattcatcctaaatcaggatcctgatgtgctagacacatgttctagaaactggacttga</cdnaseq>|
| |
| − | AA = <aaseq>ENVRTETEEKSEVLCLQAKEKEEKRLKAKQKEAAMLQAQPALDV LKKVEKKHRGKAVEDENPEDFIDQDTPNGQKKLLAPQMANQYCPSTVEKSWYAWWESS GYFRADSASTKPPFVIVMPPPNVTGALHIGHALTVAIEDAMIRWRRMSGYNALWVPGV DHAGIATQVVVEKKLMRERNLTRHDIGPDNFVCEVLKWKERYGGTILNQLHRLGASLD WSREAFTMDEQRSNAVTEAFVRLHKEGLIYRDNRLVNWDCTLLTSISEIEVDHIDLKE ETMLKIPGYATPVQFGVLISFAYPLEEGLGEIVVATTRIETMLGDTAIAVHPEDKRYM HLHGRYAVHPFNGRKLKIICDAEIVDPSFGTGAVKIAPAHDPNDFEVGRRNNLQFINI LTDDGKINSNGGAQFEGMPRFTARICIIEALKAKGLYKGAKNTETSLGICSRTNDIVE PMIKSPQWFVNCNTMAKVALDAVRSKRIEIIPPQYEQDWYRWLENIRDWCVSRQHWWG HRVPAWYVTLEDDQEKTLGSDNDRWIVAKSESAASVEAQKSYPGKKFILNQDPDVLDT CSRNWT</aaseq>|
| |
| − | DNA = <dnaseqindica>6869..6887#6558..6785#6239..6432#5662..5832#5221..5523#5067..5124#4830..4909#4639..4722#3600..3677#2974..3057#2830..2895#2607..2679#2338..2507#2146..2219#1919..1955#aatccctttcgtgagagaaaaaaaacaaaagaaccctaactcgcggccctttgtctggccgctctcgccgtcgtctctagtcgacggccgcggtggccgttggcggagcgaacagccaactcgccgagtctctctccgcggcaggcgaccccggagctcctctccccaggcggacgaatccgaggcccccctccggctccgagcacacagccagagtaccgcgacatacattgggtgtccctgtaccagatccacttatcgaatgtgagtacatgaacagatgaactggatggccttgtttttttgatatgcaagtctccaatttgatatgaccatatgaacaattactgggtacccaaaataagagaagcacgctggagtttatgtgaatattttcctcatgcatgcttgttcctcgtatctccaatttgatctgcaagtacctcatgcctgtctgagacaattcgtgtgctttcacgaactgattctccacattttactgattgtgatggccagatgaagctatgcctactatgcttgttagtaataccgcgtgctgtataggtaaattaccttttttgatacttgtagtagcagtagtgacatactctccaatgctgatatttatgaccatgacagtagtcttgatgtactttttgcaatcaagggagtgatcacaccacattcacattttttttttgaaaaaaatgtaatctatggatgatcaactacaagttccaacaatgctagttaaatttttagatgttggtgtcaagagaggctttttactgagaggtttgagcagtttaggtttcttggccctggctgtaattgagccctatgcgctctgttgcaatcaaggttaaatgctgtaggttgttaaactcgtcgagaatgctgttgtgcgacaaacattgcaatatcattgctttcctggtaatgaaatttgggtgtgctcgttgtgggaaaaaacaatgttagttaaatgtgcatgcaccttatatgtcaattcccctccaggtattaaaaactattaaaacattttacagaaacaaataggttcactccaaacagccaggggcattacagacattgcacacatcaattggcgcaaagcagggctgcgaaacagacacaacttttacagacttacataccaaaagcaagaagcggcttttggagaagctttagcccaaacaaacaggcccttaagcatggaaaaggtaggttaacatggatcaggcagtctgatcctatgcttctgtttgtggggaattcttctctatctctctctgctttagtgatactaatttggatgtgttcttctgcagcagcccgaggtgcatggtccggagaaggctccggagaaggtttgtatagtccctaacctaaccttaccttacctcatgttcgctttgatgataagcttatgcatagtcatttataatcgaattgcacttgtgctacaacctctagtccatgattactatgtctcgttcgtgtttcatgaatccatgaattcatggaactgaatcagccgtttatttagagcattggcgatgcatatcaagcatcatatattttagtagcaccagtgaaatgcactggccatagacataggaacatttatacatttggtagtgtgaggcttcccccaccccagcacacagatacactcttacacacaccaagagagagagagagagcatagacataggaaatacatttggtagcctgaggcttcccccaccccagcacacagatacacacaccaaaaaaaaagagagcgagagagagaaaatttcaaggaggtacttgatgcatggtacaaactaactgtgttttgttttagagttttaactccacagcccattctattcacttctcttctttgtggatgcatgcagcaacttgatgagaaaacgttagaacggaaactgaggaaaaatcagaaggtatcaattaaatttccatctagggtttgctctcaaaacattgttttttttttgttttggcctgagtggctaatctgtaacctaatgccttaatgggtaattgaaatcttactgaacagttgttttaaatttgttgaattattaatttgtttgttaatactgtgtgcatgaatagccatatggggttaagtgttatgcttgcaggctaaagagaaagaagagaaaagacttaaagcaaaacaaaaggaggcagctatgcttcaggttcaaatataattctttaatttgtatgcgaatgtacagttgatccagatttgtatgaaacgaaatggttgctggagatgactttacttatttcgtcacactgctttggtttctgtaggcacagccagctttagatgtactcaagaaggttgagaagaaacataggggaaaagctgtggaggatgaaaatcctgaagattttattgatcaagacactcctaatgggcagaagaaactgcttgcacctcaaatggccaatcagtattgcccaagcacggttgagaaatcgtatgatgccaaattggtagtttaaatttattggttttatggcattggaaatttgtgctgaactgcatgtcttcctttgtttgtattttcatgatgcagatggtatgcctggtgggaatcatcaggatattttagggcagattctgcaagcacaaagccaccatttgttatagtaagtgtttcatgctcatgaagattgtgcaagatatgctacaagcttatttagcaaactgcataatatgaaatcaccgttttatattgtcaaattgttcacacaaatgctgattagcttccagcaaagagttaagttatttcttttcaggttatgccacctccaaatgtgactggagctcttcacataggccatgctcttacagtggctatagaggtagtattttttaatgcttgtagaaatgtctatgacattttaactgtatttactagataatgattttgagcaatgcaggatgcgatgatacgatggcggaggatgtcaggttataatgctctatgggtccctggagtggaccatgctggcattgctacacaggtctgcatttagcaatcggttcgcgatctgctggagttcatcttatgaaacataaaactatagatggtagagtttattagctgatgtatcttggtagcacattctgccattcaacttatgggatggacatgtagaaatcagtaattgcagtgtagttgtcatgtgcagccattgaaagatagctttcaacaagggtatttatgcaatgttaataaaagcacttctgtaattttagcagaactttcataattatgtttggaatcactctattaatttctttacctttagaattagcaattgctcattcaccgaatacacggtcaactttttttactttacaaattgcaccttcttttgttgcttctgtaccctttataattctttttttatttcactcatattttttataaatttaatttggcatctgtagttcaaagttttgttttctttgaactttgcactggtggacaattgactacttcaattttatgtacttccttaatagtgggctttgttttgacttattttctgttgcacatcaggttgtagtagaaaaaaagcttatgcgtgaaaggaatctgacaaggcatgacatagggcctgacaattttgtttgtgaagtaagcacttttttccgtaagacatgattatgtttgtcacccaatggtttattcttgcccatggcagtgttgtctgctttgtctgattaattccatgccgccaatcttctctctgtgcactggttagagcgttgaactctgggagtcgttcgaactcccacctgaccgaggtttgaagtgtggcaccttcttagaacaaagccctgatggtctccccccagggttgagttttcttttacctgatgtgatgcagcatactatattggagcaaccactctgatgtgctgataggtagatgtaacacaatgtgttcaaggaacagattcaatgtgctagtcgataatgccgtaagggcaatctgaatcccacagataatagagcttaagttaaaactcaagaaagagatctaatccaagatctgaaataggaacatcgagttctattgatagggttgtgaatacatgtgaactacaaaactagagggcaatgcctctatttataggctccaaggtcttacacaatacacatacaactaagatgacagccaaaatgacaactaagatattactcataagaactcttctattactcaatgacacttaagagtaaacttgtaggcaatgtttttaatagcaaccttatcaatagaacttcttgtacctaggccttcataggtgattgtacttatttcaacaggttagagtaatgcaatgttaaatagagaaatttggcacattaatgcaatgaacaggttaggagcttgaccgcgtaggtacaatcacctatgagtaatgcaaatcacctatgatgcagctcaaattgacttcttgttcttaatagcaaaaatccagattcacctgtagttctttttagtttatgaataatcatttgatgtccctcaccagtaccatttcctttttgacattttcttattccgttttctcttcaatctgttggaaaggttctcaaatggaaagagcggtatggtggtactatattgaatcaattgcaccgccttggggcctcacttgattggtctcgtgaggtagtatttccatttctttcagttacggaaaaacattacttgctattgaaccatgcatagttttgcaattcgaactctctagtaacctaatctcaacctggcatcaggcttttacaatggatgagcaaaggtcaaatgctgtaactgaagcttttgtaaggttacacaaggaaggcctgatatataggtaagttacctcaccctttgtgttttgacttttgagtgttaacatggaaaattttcacctattgatgttgctatgataaacctttttatttgtacattcttgtttttcagttgccagctaatttttcacatgttgcggatgatttgttccttttcagagataaccgccttgtgaattgggactgcacacttctgacttcaatttctgagatagaggtctgtggaacattttttttgtttattataaacgaattaaatctacgcatacatgactaagatgtctttcttcattggaaaatgctgttttttcaggttgatcatattgatcttaaagaagaaacaatgttaaagatccctggttatgctactcctgtacaatttggtgtgttgatatcttttgcctatcctcttgaagaagggctaggtgagattgttgttgcaacaactcgaattgaaacaatgcttggtgatacagcaatagctgttcatcctgaggataaaaggtatatgcatctgcatggacggtatgcagtccaccccttcaatggccgaaaactcaaaataatctgtgatgctgagatagttgatcccagtttcggtactggggctgtcaaggtaggagctagtgccttgttttacttgtttatttctgcctagtgctatttgtttctatctcttgtttcacatagttggatcttgctcactcgctatctccacttgacttattttgttgtctgctggtcttttatgcagattgcacctgcacatgacccaaatgactttgaggttggaagacggaataaccttcagttcattaatatcttgacagatgatgggaaaataaacagcaatgggggtgcacaatttgaaggaatgccaagattcactgctcgaatttgcattattgaagcactgaaggcaaaggtattaatggatttgtttaatcatactttcagaaaattttttttgagggaaaatactttcagaaaatttctatggcatcagaatctctaaaagataggcaaagatatgcattataatgtacaacatggcatgcaaaactttaacagagctctattaaaactataacttgcatcatgtcattcctttgggattgtgtaatgggcattcataattagggtattaagagaatctcatgttttagtggcatcctgcatatctgtggaagctagtgataaaactttacccttaaaatgttttgtttttcctgtgtgcttggtgggtagggagtctttgccttctttttgtttcataaagttcgttctaaatagttctgtacttctgacgatgtttgattatgctaattaagggcttgtacaagggtgcaaagaataccgaaacgagtttgggcatttgttcaagaactaacgacatagtggagcctatgataaaatccccgcagtggtttgttaattgtaacaccatggccaaggtagcccttgatgctgtaaggtctaagaggattgagatcattcccccgcagtacgaacaagactggtataggtacatttatccacttttacatacttgttatatatttgtcacatcttttaaaaaatcatgtcatttgtcaaatcaatgaaataaacagaaaacaaatgatagaacaattgcttgtgtcattgcagatggcttgaaaatatacgtgattggtgtgtttcaaggcaacattggtggggacaccgtgtacctgcatggtatgtgacactagaagatgaccaggagaaaactctaggttctgacaatgaccgctggatagtcgccaaaagtgaaagtgctgcaagcgttgaggcacagaaaagttatccaggaaagaaattcatcctaaatcaggatcctgatgtgctagacacatggttttcatctgctctcttccccttagcagtacttggttggccagatgatactgctgacctccgttctttctaccctacttcagttctagaaactggacttgatattctcttctgttgggtagcacggatggtgatgatgggaacacaacttggtggtgatgtgccgtttcagaaggtatagcacaaatcccccattcaatgccaattagaattatattttacgattgtagtggtctttaatatgcatttcattcatgttggttgttcttgtttggagcctatcattgccttctatatccccttaagatggttaaattttgctttactttgctgaacaataaaatctataagaatagattaattgaaccatccttgaatcaccatcaaaggcgcgtgtgttctggtgtttccaaatacaccttgcgtccaggatgatcgagtcctttcgtgtgactgttgaacgctgcttgcatgctgccaccattccatgaaggacccactggttcgagttggtgggagatgaatagatgatgcaccctggcaggggtagcacctcaagctatacccatacctgacgagcaaatacgcaagagaccctcctgatcacacaagtgaccaaggcatcgtgcaagtctatctaccatccaatgacccaccgcttccgatgacaacaccaatgctgaaaactgatgctaccaacagaagcaagctgtaggccagtttagcatagtatgactagatgtcgagtggatcaaaacgtgttcatcctgtgtctccagttgcaggatttcccaaagctgttattgaaccagcgtaaggatgcatagagagatcccttgatgtcctaaccccgcaatgttcatgaagaggttgctgaaccatactttgtttccgttagcatttggtgactaaggcccgcaaattacagacaaggtcagctactgacgtcccatgtagccatttattgatccagaatatatagtactgtggccatcacccactatagatcagctaccaacgtttcattagttgtgttcacactagagagctagtaaaaagagtttgtgcgtgtgtattaaacacccaagagatcagtgagagatcaggggctgcacggtgaaatcagataaatactggtttccttctgaatgaactctgtatcttggtaatatcgtaaccatatcgtaagggactgatagatattaactgacaccaggtaaggcagttaattatctgctgcgctgtaactaatgactgcttttttcttaggtttatttgcatcctattgtatgcgacacacatggccgaaaaatgtgcaagtcacttggtaatgtcattgatcctcttgaggtgataaatggcatgacactcgagggtcttgtaaaacgtctggaagaaggtaatctggatccagatgaattaaaccttgaacggaagctgacagattatcctgatggaattgctgaatgtggtactgatgccctccgctttgcactgatttcttacacttctcaggtttgtaatcacattttcatttgagttttgcttcactagcagttcaggttttatctccttttttcagtctgacaggataaatcttgatatcaagagagtggttggataccgacaatggtgcaataaattgtggaatgccatccgttttgccatgggcaagcttggtgttcactacagtccacctgcaactgtcgacgtgtctatcatgccaccaatctgcaagtggatactctcagcactaaacaaggctaccggcaaaactgttacctctttagaagcatacaaattctctgatgcaacatctgctatatactcttggtggcaataccagctatgtgatgtatttatagaagctataaaaccttacttcttcaacgaacctcaagagtttgaatctgcaagagtcgcctccagagatactctatgggtttgcctggagactggtttgcgcttgctccacccattcatgccttacataacagaagagctatggcagcatcttccacaacccaaatattcttgtaggcaagattcaattatgatttcggaatatccatctctcgttgaggtaatacctgtttcctaaataggagtgttatttagagaaattaggctctgtttagggagctagagattctaagatgaagctggtgagtagccagcaagtgagaatctagaaaagctgggttacctagcctctggattttgaactatttgggggagctagagattcttggactgtagctgccagaagctcccccaaataggtgcttagtctttgagaacttcttaactcatggaaaaatgttgttctttatgacaggaatggactaatgacaatcttgaaaatgaaatggacattgtcttagacaccgtgaacaaaataaggtctttgaagacacgaacagaaagaaaagaaaggtgtgtgtatggttatctggtttctttgtttggtatttgcctgcattattggccttgttaacaaagctgtctttgcgaaatgcaatatcttattgtttatccttttgctctgaacagacgtcctgcttttgcactctgccgaagccaagatgtcactgccactattcaatgccatcaatctctaattgtgtgtctttcttccgtatcatttcttaaggttctgtctacatttctgtatgcctgtttacatttttttttacattcttaatggttttttcttgcacggtctgcatttagtttctccgttgtggatggacatttatgtccaaacttaatggagcttgattgcctcaaaaaacactttataacgactgactcctgccaaacaatatttcctctttgtttcctttagattttcacatttatatgtttagttacaatgttcttgaaaatcaagctaaggtgaagggaattattcagatcctgacagagaatgacgaaactccagctgattgtgcaatcgctgttgttaacaaagatttgtcggtgtaccttaagcttcaaggagccataaatgcagaggctgagcgtgaaaagctaaggaagaagagagatggaatccaaaagtaagtgtgcttatcttttcttgtccttaaattttgtggtaatctggacatatttctctgttattcccaagcatcggtagcatggtctcatcatacaatgcaggctacaccatgctgtgacacacatgatggatgcttctggttatcgcgagaaggcacctcaaagtgtccaggaaggggatatgagaaagcacactgctttgttgcgggaactggagggcataagtgaagctgagaagaaactagatgccaaaaccgataatatttgactctctgatgatcattgtagtaaatagcggtgttaatgataattttggagtaaattaagcactactttataatttataatttcaaaaggtaaatttatcac</dnaseqindica>|
| |
| − | Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001056571.1 RefSeq:Os03g0335600]|
| |
| − | }}
| |
| − | [[Category:Genes]] | |
| − | [[Category:Japonica mRNA]]
| |
| − | [[Category:Oryza Sativa Japonica Group]] | |
| − | [[Category:Japonica Genes]] | |
| − | [[Category:Japonica Chromosome 3]]
| |
| − | [[Category:Chromosome 3]]
| |
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Annotated Information
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Structured Information
