Difference between revisions of "Os05g0148500"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os05g0148500| Description = Electron transport accessory protein domain containing protein| Version = NM_001061184.1 GI:115462098 GeneID:4337810|...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os05g0148500|
 
GeneName = Os05g0148500|

Revision as of 20:04, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os05g0148500

Description

Electron transport accessory protein domain containing protein

Version

NM_001061184.1 GI:115462098 GeneID:4337810

Length

9185 bp

Definition

Oryza sativa Japonica Group Os05g0148500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:2744436..2753620

Sequence Coding Region

2744436..2745139,2745873..2745999,2746112..2746152,2746245..2746283,2746867..2746936
,2747634..2747761,2749013..2749126,2749548..2749590,2749837..2749944
,2750038..2750115,2750304..2750331,2750416..2750465,2750555..2750608
,2750683..2750724,2751026..2751089,2752753..2752898,2753189..2753620

Expression

GEO Profiles:Os05g0148500

Genome Context

<gbrowseImage1> name=NC_008398:2744436..2753620 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:2744436..2753620 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatcgcttgtcgcggccggcgagccccgcgggcgggtacgctcgccggggcagcggcggcgggtacgggcaccactactacgggggcggtggcggtggatcggcgcagacgtcgccgccgggtggatctccgacggcgtcgcccgtgcaccgccacgcgcggacggggtcgctgggtggcgcgggggcggcgtccaccgtggggcgacgtggccgcgcgcataataccgcggcgagggccgcggcgcagcggctcgcgcgggtcatggcgtccaccgacggcgcgggggtaggaggaggaggcggcggcgtgggtggtggtggggatgggggcagcggcagcgacgacgacgagtacgagctctcggggccacccatcgagctctcctccaccccgcggcgcaccggcacccgctccccttccccatcggctccggtgagccgaccaccgtcgttgacgaaccgatacacgcccgggaagtcagttccgatgataccttcgatcaagcaacagaaccggccagcgacgagcggtccagggtcagagtcgcccgcaataaatcgacgggagcaaaggagatcagttgatcttggaagctctctaagagcgcggcgcacatcttcttctcttcatgatgagattaactcactccaagtggaaaccgagggcatgtacgaaaaatttaaccttgcagaagaaaggagtgaggaaggagatgctaagtccatgcacatggctgctgttattgctgatgctatagagccagaggccaatctgattagcagaaaggatgcagcgctacaacaaagaaaggcttcattgagaagtgcttcaagaaggtctaacagcgctagctgtgatgaaattgcagcccttcggtcagaagcaaaggttgccaattctgtatcatccgtatctcagcgtctaaaaagtacgggatcaatcgtgagatctcttcacggagcaaccaatagaatggtcctgtctcaagaagagatgagattctacaagtacgatgcaaaagtaaaaaaaggaagtaaaagtatacattgtgatattgctgaagaaaaacaagaatactggtcatcatttgcaccactttcacttgaagttgtcctgtcaattgggcaaaaagctagagatggagcattgtcagatcatgctgacatggagaccaaaagcaaaatgtctgacgcaagtcacgtgaatgatatgagtggagatggaaatattgagagcatgcttttagttgagagaggactacgtgaattatcttcactcaagaggacgcagtcatgcttgctttatcagaacatcgacgcgtcagacctctctcaggtggcttctccaaaatgtccatcttctgaaggccagaaccctccagagtcattagaattaagcgaggaagagcaagacgacgtacgcttcaagcagtcatggttaacctacttctggagacgggccaaaagtcatgacatagaagaagatatagctgatgagcggctacagttttggatagaacaaggcaatcatccagtttctacgatcgatatcatagaagctttgcaaattgcaaattgcaaatttgcaatccactccccttgggtgtacgccatgtccaccgatcagccacccgcgccgccggcgagcgcacggcgacggcagtgcgtggcggcggccgcggccgccaccgcggcgtgcctcgcgccgctggccgtgctcctggcggtactcgtcctcgcgccgtcgctgctgccgcggctgctcctccggccgcaccacgtcgtccccgtcgtcgcctccgccgagctccgcctcctcgccttcgacgccgcggcgcccgccgtggcgtacaacctctcggcgacgctccggttcgacaacccgggcgggctctacacgtggcggtgcacggcgctccgggcggcgccgtcgtacgccgggcagcggctcggcgacgccgcggcgctccccgggatcacggcgcgcggcgccggcgccggcgacgcccgtgcggcggcgtgggcggggacgcagcgcgtgccgcccggccgccgcgcgcgcgccgtggcggcggcgctcgcgcgggacagggcggccgggtggtacgtcatcaaggtggacgtcgccaccgtgcagaacggcgccgagagcgacttcgcgtgcgtgctcagcttcccggccgccgcgctggcgcgcaacgggagcggcgccgcggtgttcgacggcggccggtgcgtcgacgccgtgcacggcgagatttag</cdnaseq>

Protein Sequence

<aaseq>MDRLSRPASPAGGYARRGSGGGYGHHYYGGGGGGSAQTSPPGGS PTASPVHRHARTGSLGGAGAASTVGRRGRAHNTAARAAAQRLARVMASTDGAGVGGGG GGVGGGGDGGSGSDDDEYELSGPPIELSSTPRRTGTRSPSPSAPVSRPPSLTNRYTPG KSVPMIPSIKQQNRPATSGPGSESPAINRREQRRSVDLGSSLRARRTSSSLHDEINSL QVETEGMYEKFNLAEERSEEGDAKSMHMAAVIADAIEPEANLISRKDAALQQRKASLR SASRRSNSASCDEIAALRSEAKVANSVSSVSQRLKSTGSIVRSLHGATNRMVLSQEEM RFYKYDAKVKKGSKSIHCDIAEEKQEYWSSFAPLSLEVVLSIGQKARDGALSDHADME TKSKMSDASHVNDMSGDGNIESMLLVERGLRELSSLKRTQSCLLYQNIDASDLSQVAS PKCPSSEGQNPPESLELSEEEQDDVRFKQSWLTYFWRRAKSHDIEEDIADERLQFWIE QGNHPVSTIDIIEALQIANCKFAIHSPWVYAMSTDQPPAPPASARRRQCVAAAAAATA ACLAPLAVLLAVLVLAPSLLPRLLLRPHHVVPVVASAELRLLAFDAAAPAVAYNLSAT LRFDNPGGLYTWRCTALRAAPSYAGQRLGDAAALPGITARGAGAGDARAAAWAGTQRV PPGRRARAVAAALARDRAAGWYVIKVDVATVQNGAESDFACVLSFPAAALARNGSGAA VFDGGRCVDAVHGEI</aaseq>

Gene Sequence

<dnaseqindica>8482..9185#7622..7748#7469..7509#7338..7376#6685..6754#5860..5987#4495..4608#4031..4073#3677..3784#3506..3583#3290..3317#3156..3205#3013..3066#2897..2938#2532..2595#723..868#1..432#atggatcgcttgtcgcggccggcgagccccgcgggcgggtacgctcgccggggcagcggcggcgggtacgggcaccactactacgggggcggtggcggtggatcggcgcagacgtcgccgccgggtggatctccgacggcgtcgcccgtgcaccgccacgcgcggacggggtcgctgggtggcgcgggggcggcgtccaccgtggggcgacgtggccgcgcgcataataccgcggcgagggccgcggcgcagcggctcgcgcgggtcatggcgtccaccgacggcgcgggggtaggaggaggaggcggcggcgtgggtggtggtggggatgggggcagcggcagcgacgacgacgagtacgagctctcggggccacccatcgagctctcctccaccccgcggcgcaccggcacccgctccccttccccatcggtaacctcaatccatccccattttcacttccatcactcggcagcggcattcaatcgtcaatcccgtcttcctaataatctaatactcattcacgatctcctaattaatggaatatgccggctgatttatgattttacatcacgcatttcgcattgtttatgcgggtgatgtgtttgatgtgattatttgttacttgtgttcaccaaccaatagtgggcatggtgctcggcgcgctaagtggtggcgtgtaattctgtgcattttagataggtcgttacctttcggatcaggctccggtgagccgaccaccgtcgttgacgaaccgatacacgcccgggaagtcagttccgatgataccttcgatcaagcaacagaaccggccagcgacgagcggtccagggtcagagtcgcccgcaataaatcgacgggagcaaaggtatgctcacatgtttcaggtcttgcacgtggcagatttcatactgcattgttgaaattgttcccatatacatatagcttctccttgctcaattcagcatggctatgcattcgagaggatgttatttatcatgtcccatgtgatttataagtggcgaagccaggatttggggttggggggtgtggggtagggataagccataaggccgaataaccaatatcgatagcaaaggaggccaaatagtcactgtcaataacaataaatgtgtaaactagttctttacaaaaaaaacttgaattttagctctttaataatataattggaagtttggaactagttcttaatgctaaatcctttcaatgtaaataggcatcttctattttactttgaaaaaaaagggaaatcactaactaattttgtagatattgtttcttgctaatgggctaatgtttttttagacttgctaactgcctgaccttgtaagtacaatcatacaacaacagggaggaggggttcagataggggtgtgttggcaccctccggcacccccaacagctccgccactgattaataataatggcatgcatgctaatactggctagtttagtttgaggctgtagcttatataccacatatcagtgagatgtgttagtttactcggcagagaaattgagctgcagatcaaagcaatgggctttgtgccatcattttgttgttggatggaaattttatgaatttgttctgttgctaattttctgatgtaggcaccatattatcatgagcttcggaatggataacacatccacgagtgttgctttatatgtattgcatttgggatttaccctaagcgctacctatcatctatgtaaatttatgcatttcttcacaaatggtggatccaagtgcaccaatgtgttgctttggagaaaattaaacagaacaagtcgcgaatagaaataagtcaaatagctaatctaaaaacacaaaaagcttgttacaaaattcatgcatgcactaacctaggttgatgtggcatttgaaacagattattgccttagattatctacttgatgatagggataagttaaatactttgagaaataaacttaacagatagcttagaacaattggtctaagcaacgcggtagatgttttttttttgttgagaagccgtatttttagagccgtggagcaataatccatgacagcaatccggcaaataagctactactacctccgtcccaaaatatagcgacttttggagctagaaatgcttatttttccacatttcctgggatcaacttcagttggttccacctaggtagtagggtacacacacgcttgcgcattcagtggtactgcatgtttcccgtgcattgaggacttagtacctcaaatctctttcctaccgtgtgttagggacgtgcacgcgtgtgttgtggtgtgagtgtggtatgtgttcgtgtgtgtcctgagttgtaccctctcaaaaaaaatgcttatattttgggatggtgtaacaaataatgccttttgtcgtatctccttccggaagtctctttgtgttgttaattgacagcaagcacctaattgagtttttgttctcttttgaatattattttttatgatcactaataagtaatataggctaaatcatccttaggagatcagttgatcttggaagctctctaagagcgcggcgcacatcttcttctcttcatgatgaggtgattcctgtcataaacagcattttctaagaatttttttcttcgaaaacacaggaggataagaaaattaatgataggaaatgcagaatatcctatatactacttgagtttgtcctaaaatatgagtttgctctcatctatgtttagtccttgattcttgttccagcgaaatgtggtatgactgtttgtatggacttttggatccatctgccaaaagtccaaaacagctatctttctccactttaagattaacctttcttatatgcaacactagtgtgattctttgatgcctcctttgcagattaactcactccaagtggaaaccgagggcatgtacgaaaaagtgagatgaaatcacgattttggatttaatttctgctttaatttgttagaaacactcaaacatgcatcttccagtttaaccttgcagaagaaaggagtgaggaaggagatgctaagtccatgcacatggtatgtccatacacagatacccctcagctatgcatcttcaatgcattgtttgatgtattgtgtcaacatctctgatgtccacatttcaggctgctgttattgctgatgctatagagccagaggccaatctgattagcaggtgtataatttaacaaaacacgcatcttcttgttatacatgcattgcttcttatcttaaactatgttcccatcttgactcccagaaaggatgcagcgctacaacaaagaaaggtaggtttctgcaccaaaatccatatgttcaaatttgatggaacaatttaaattgaaagattttttttattagagcttcatttttatgaatatttctgcacaataatgttgagtttatgactttatgtgcttttgggtgaacaaatttctgtttactaactctttccgaagatctgttgtgctcttaggcttcattgagaagtgcttcaagaaggtctaacagcgctagctgtgatgaaattgcagcccttcggtcagaagcaaaggtagagctttcaccaaatatggttacttattgctgaacgattttcccagagttgtattttgcaaacctaacttttatttatgctgtcgggtaggttgccaattctgtatcatccgtatctcagcgtctaaaaagtacgggatcaatcgtgagatctcttcacggagcaaccaatagaatggtcctgtctcaagaagagatggtgaatatgtttgcctcactatttatactttgacatttcgtagcaaatggatatatcattaaatctgtttatgaaaatcctttttaggaggaggtggtgctaaagagatgttggcttgctcgctactggaaactgtgtgttagacttggtattgagatacttcacactattaatacttatttacagagtggtggtattccttctgttgtaaattctaactaggtctcaaatgtatgtactatgtagagattctacaagtacgatgcaaaagtaaaaaaaggaagtaaaagtaaattcgtaaaattttaaacagatgtaaactttaagactgaaagaatcaagatatgcattattgcccttgcctgttctgtcctttaaatacacatgcaaaagattggataatgctttgcatattttacctttaaaatattgtgattgctgccttgctacttctatatgctttttcaaataactaaattgagtaagtatatttgtgtagcagtgtgttcattacttggatactatgattttctatgaagcttcatatctttttctgttttattattttttttgctacagattaatgtcagggtgttgaggaattagtgtctttcagactgttttccttttcaggcagtcaattgtttcaaaaataaatttgttgtttacatgttttctatggctagctaaattgagtttttttttatcaggtatacattgtgatattgctgaagaaaaacaagaatactggtcatcatttgcaccactttcacttgaagttgtcctgtcaattgggcaaaaagctagagatggagcattgtcaggtcaggttccttatcaaaaactcttttgtgaagatgttgattcaagtatctcatgttcagttactctacaagtgctttgattataaccattggctatcttatggacatggaatcgagacccaaattatcaccgatcaggatacctcatagcttagatcgagaaaaaaacttatgtttgattttctcagataaaatgccaagacttagtgccaaaggccttaatagaatgaagcaattctttaacttcagtaggtccaccttaattggtagatgaattcaatgatcaatgcttgcatggcggatgggtgggatccgatgttatttgaagcagctattgataccgcctccgtgggagccaacggtcgtggttgtgaggccttttctggtgggatctgaatctcatctctggttatggctggtcggagttgtttgtttgtttctaggcattgtgttggtcggttaaaggtcatgtttggcattgtctagttgttgttttgcttgtgtgaggcgtcttttagttgtttctttggttgtgcttggttgatgttctggtcatgtaaggtcgcatgaggccgcaggggcagatctactgcctggtgaccccaggcagctgcccgggctcgtcggtggttaatccactaaaattccatgtaattaagaaaaaaatgaaatagaatttctgtagtaaatactagctatagtgaagtttgctcgtgctctaaaataattctagatacgctactgtgaggccgttgttttggttgtgcatggtcatgtaaggtcactgtacctggctattttagcttttcttctctcgtaatgaaatgacgtgcagatctctgccatgttccaggaaaaaaaaacttaagtaggtcaaatagctagtaagagtttaaattaatctacagaatgtacttgagttgttcaaagttcgctgtccattttctgatatttaatttgtggttaatattggatgattgccacttttaattctgcaccatgcaactactgaatgattccaaggacttttgtcccctgaacatgcagagtaacttgctccatcttttgctttaggcactaaagttctcatcaagagggttgatcttttatttatctccttcatttttcatgaccatgttaccagatgaagcatcattcttttgaagtgtacatagctcatataaattcatcatttcaatcactacatatctgtacatatctgctctacagaattgtttgtatataacgcagatcatgctgacatggagaccaaaagcaaaatgtctgacgcaagtcacgtgaatgatatgagtggagatggaaatattgagagcatgcttttagttgagagaggactacgtgaattatcttcactcaaggtttttcttgctacttattattttgatattcatctagtttatacctttctttcaaagtccatgtgataccacatgacaagtttggtgagatacatggtccagaaataaaaccgtgtacttgaatattttgttcatctttcattttctttctgttcataaatttgcaatgaatttttcctagaatgtgaaagttatcttctgtcaattctctcattttttttaaagtcagttttagtgttgatgaagttagttcaaaatattttgatttggtttcagtctcatcagttgatacaaagactgctaattcactattcatgcatcacttttttgtgtaattagtgaaatgcaaagtgatgtatgaaacttaagagtgctactagactattactactactccctccgtttcataatgtaagactttctagtattgcccatgttcatataaatgttagtgaatctagacacacatatatgtctagattcattaatatctatatgaatgtgggcaatgttagaaagtcttacattatgaaacagaggaagtattagattgactagctttatcattgtgttgtatatattagatgcaatatatgtgtcaacgaattttcatttacatattcccacggaatggtagagaactattatttttatttgggtttcggtctcaataatttaatatcccctttgaaggtagaggacgcagtcatgcttgctttatcagaacatcgacgcgtcagacctctctcaggtggcttctccaaaatgtactcatttcttattcttttcttataatatttttgttttatgagattcccaggtctcttatctcgaaatatttctctctatcaagataaactcataaaatatttttttttcttaatattcagtacatggggaatgtatgcgagcctcactgtgagggtaccgacaatttgatgtttaacacatagcatagcttgggattttgagagctggttataccaattccctcgttcctgatgagaagtgatacactgactgattgtgataccatgaacaaaaccgtatttacaagatagctcatttattcagatgttgcatatgaaataacttcacaacaaaatattagataatatttaatgtgctgaagaattgcagtttattgtgattagaactgctttctagaatcatccctgcacaattcactgagacttcaaaaaaattactatgtcgctatgttgacctgattctattagatgaatacaacttccagtctgaatattgcaactttattacgcacatcaatggcctgcagcaatgcgtgacgtgtagttttactactatgacttaagtttccaattactgcaggtccatcttctgaaggccagaaccctccagagtcattaggttagttctactttactaatattcctttttacatccatagctcgggaataacaatttcactttctaattacatatgctgtcattggtcctagaattaagcgaggaagagcaagacgacgtacgcttcaagcaggtgaaaaaccactctggcattttgttttctcctggaatcgatgtgatgttgcacaaaaattcgttttcggtcagaactggtatgtacaagaactcatgaatacatatggcagtcatggttaacctacttctggagacgggccaaaagtcatgacatagaagaagatatagctgatgagcggctacagttttggatagaacaaggcaatcatccagtttctacgatcgatatcatagaaggtaatctcctctctgaacaatgatgaaactcttgtctcaaagtctgccatcctttgcactattcgttcaaagtttgaaatcatatacttctcgttttgactgtcttgtacaaaatttaccggctaaattgcttactttatctgatgcttttcttgtttgcaaaattatgtaaacaagttgagagaggacttactgagctgaggaagctgggaatcgagtctcagctgtgggaatcgacgaggagatctctcgacgatgactttagcaatcacgggagcccaaccggatcagaaatttagcagaaacataataatggaacgaggcctagtgccaattttgtttttgttcgctggtcctagagtctcattgtttttgcgcacttgtcatatatattcattcatgtaaaagttttgatcggaaccaaaactaaattctctctcctggaatctctcctttttaattttctggtatgttaatttattattctgttaaagcaaaagtgctggattaatcatggaatcatcagtatgctgcgttgtcaaattacatggtctgctgcaacaagatgtgtgcagtgcactggttggttcctctccttttgcttttgcaatggtgcttctattctttcaaggagaagaaaaaaaaaaagttcgactctttcaaggagaagaggagagcacagcaaagcaaagccccactattctgcattgcttgctcattagcacatttgcagctttgcaaattgcaaattgcaaatttgcaatccactccccttgggtgtacgccatgtccaccgatcagccacccgcgccgccggcgagcgcacggcgacggcagtgcgtggcggcggccgcggccgccaccgcggcgtgcctcgcgccgctggccgtgctcctggcggtactcgtcctcgcgccgtcgctgctgccgcggctgctcctccggccgcaccacgtcgtccccgtcgtcgcctccgccgagctccgcctcctcgccttcgacgccgcggcgcccgccgtggcgtacaacctctcggcgacgctccggttcgacaacccgggcgggctctacacgtggcggtgcacggcgctccgggcggcgccgtcgtacgccgggcagcggctcggcgacgccgcggcgctccccgggatcacggcgcgcggcgccggcgccggcgacgcccgtgcggcggcgtgggcggggacgcagcgcgtgccgcccggccgccgcgcgcgcgccgtggcggcggcgctcgcgcgggacagggcggccgggtggtacgtcatcaaggtggacgtcgccaccgtgcagaacggcgccgagagcgacttcgcgtgcgtgctcagcttcccggccgccgcgctggcgcgcaacgggagcggcgccgcggtgttcgacggcggccggtgcgtcgacgccgtgcacggcgagatttag</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0148500, RefSeq:Os05g0148500