Difference between revisions of "Os05g0150300"
(Created page with "{{JaponicaGene|
GeneName = Os05g0150300|
Description = Similar to Possible global transcription activator SNF2L1 (SWI/SNF related matrix associated actin dependent regulator...") |
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| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{JaponicaGene| | {{JaponicaGene| | ||
GeneName = Os05g0150300| | GeneName = Os05g0150300| | ||
Revision as of 20:04, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os05g0150300 |
|---|---|
| Description |
Similar to Possible global transcription activator SNF2L1 (SWI/SNF related matrix associated actin dependent regulator of chromatin subfamily A member 1) |
| Version |
NM_001061199.1 GI:115462128 GeneID:4337825 |
| Length |
10138 bp |
| Definition |
Oryza sativa Japonica Group Os05g0150300, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 5:2852371..2862508 |
| Sequence Coding Region |
2852581..2853069,2853645..2853776,2853922..2854025,2854622..2854734,2856851..2856948 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008398:2852371..2862508 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008398:2852371..2862508 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggggaagccggggaagtatggcgacggcgacgacgacgactcggaggaggagcagctctccccttcgtcttccgccggcgaggaggaggaggaggaggtagaagaggaagagggggaggagcagcaggaggagcagggggaggaggaggaggggtttagcggggacgaggaggagcaggaggtggagggtgaggcggatggggagcaagtggaggaggaggaagaggaggagtctagtgtcggggaggaggaagcagaggcggagggtgaggaggaggaagaggaggtggaggaggagcagggggctggggaagaggaagaggaggaggttgatgaggaggagatcgaggcggtcaccaccggcgccggaggggacgacgacgacgaagaagtgggcgatgacgggggcgcggaggaggagtcgcagtccacggaggacgacgaggtcgccgccgggaaggatggcggcggtgaagatggcgacaagttggaagatgctactggaaacgcagagatcgggaagcgggagcgagcaaagctcagggagatgcaaaagctgaagaagcacaaaatccaggaaatactggatgcccaaaataaggccattgatgctgacatgaacaacaaggggaagggacgtctgaagtatctcctgcagcaaactgaaatatttgctcattttgcgaaaggaaaccaatcgacagagaagaaatcacgtggaaggggacgtcatgcatcaaagatgacagaggaggaagaagatgaggagtatctcaaggaggaggaagatgcccttgatggtgcaggagggacccgtctggtttcacaaccatcatgcataaaaggaaagatgagagattaccaactagctggacttaattggctcatacgcttgtatgagaatggcatcaatggaatattggctgatgagatgggtcttggaaaaacccttcaaactatatcactgcttggatatttgcatgagtttagaggaataaccggtccccacatggttgttgcaccaaagtccactcttgggaactggatgaaggaaatacaacggttttgtcctgttctgcgtgctatcaagttcttaggaaaccccgaagaaaggaaccatatccgggaaaatttgttagtcccagggaagtttgacgtctgtgttactagttttgaaatggcaattaaagaaaaaactgcattgaagcgtttcagctggcgttatattattattgatgaagcccaccggataaaaaatgaaaattcccttctctctaagactatgaggatttacaatactaattatcgtctcctcattacgggcactccactacagaataatcttcatgaactttggtctcttctcaacttcttgttgcctgaaatatttagctctgctgagacttttgatgattggttccaaatctcaggggaaaatgatcaacatgaagttgttcagcagcttcataaggttcttcgtccatttctgcttcggaggcttaaatctgatgttgagaaaggtttaccaccaaaaaaggaaactatacttaaagttggaatgtctgagatgcaaaaacaatattatcgtgctctgcttcagaaagatctggaggttgtcaatgccggtggtgaacgcaaacgccttcttaacatagccatgcaattgcggaagtgctgcaaccatccatatttattccaaggtgctgagcctggtccaccctataccactggagaccatctaattgagaatgcaggaaaaatggttctgttagataaattacttcccaagctaaaggaacgtgattccagagtacttattttctcacagatgactaggctcttggacatcttggaagattatctgatgtacaaggggtatcaatattgccgaattgatgggaatactggtggtgaagatcgtgatgcttcgattgaagctttcaacaagccagggagtgaaaaatttgttttcttgctttcgactagggcaggtggtcttgggataaatcttgctactgctgatgttgttattctttatgacagtgactggaatcctcaagtggatctgcaagcgcaagatcgtgcacatagaattggtcaaaagaaagaagttcaagtttttcgtttctgcactgagtatacaattgaggaaaaggtgattgagagagcttataagaagcttgccctggatgctttggtcatacaacagggtcgattggcagagcagaaagctgtcaataaggatgagctattgcagatggtcagatttggtgctgaaatggtattcagctccaaggatagcacaataacagatgaagatattgaccgcatcatcgctaagggagaagaagcaacagcacaacttgatgcaaaaatgaagaagttcacagaagatgctattaagttcaaaatggatgacactgctgaactgtatgattttgatgatgataaggatgaaaacaaacttgattttaagaagttggtcactgacaactggatagagccaaccagcagaagagaaaggaagcgaaactactctgagtctgattatttcaagcaagcacttcgccaaggtgcaccagcaaaacctagggaaccgagaattcctcgaatgccacacttgcatgatttccagttcttcaacactcagagactcaatgaattatatgagaaggaagtcaaataccttgtgcaagcaaatcagaaaaaggatacggttggtgagggtgatgacgaagatcaactggaaccgttgactgtggaggagcaagaagagaaagagcagctattggaagagggcttttcgacatggacaaggagggacttcaatacattcatccgtgcttgtgagaagtacggtcgtaatgacataaagaacatatcctctgaaatggaggggaaaacagaagaggaggtgcagcggtacgctaaagttttccaggaaagatacaaggaattaaatgattatgaccgagttattaagaacattgagaaaggagaagcaaggatataccggaaggatgagattatgaaagctattgggaaaaagctagaccgctataagaacccttggttagagttgaaaattcagtatggccagaataaagggaagttatacaacgaagaatgtgatcgttttatgttatgcatggtgcacaaactcggatacggaaactgggatgaactgaaagcagcctttcgcatgtcgcccttgttccgatttgattggtttgtgaagtctagaacaacccaagagctagctaggaggtgcgagaccctcattcgtctagtggagaaggagaaccaagaatatgatgagcgtgagagattggccaggaaagataagaagaatatgtcgccagcaaagcgttcttcatcaaggtcgctcgatacccctccacaaagctcttcgaagaggaggcgccagtcctacactgaagccaatgcaggctcgggaaggagaaggcgagggtga</cdnaseq> |
| Protein Sequence |
<aaseq>MGKPGKYGDGDDDDSEEEQLSPSSSAGEEEEEEVEEEEGEEQQE EQGEEEEGFSGDEEEQEVEGEADGEQVEEEEEEESSVGEEEAEAEGEEEEEEVEEEQG AGEEEEEEVDEEEIEAVTTGAGGDDDDEEVGDDGGAEEESQSTEDDEVAAGKDGGGED GDKLEDATGNAEIGKRERAKLREMQKLKKHKIQEILDAQNKAIDADMNNKGKGRLKYL LQQTEIFAHFAKGNQSTEKKSRGRGRHASKMTEEEEDEEYLKEEEDALDGAGGTRLVS QPSCIKGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLGYLHEFRGIT GPHMVVAPKSTLGNWMKEIQRFCPVLRAIKFLGNPEERNHIRENLLVPGKFDVCVTSF EMAIKEKTALKRFSWRYIIIDEAHRIKNENSLLSKTMRIYNTNYRLLITGTPLQNNLH ELWSLLNFLLPEIFSSAETFDDWFQISGENDQHEVVQQLHKVLRPFLLRRLKSDVEKG LPPKKETILKVGMSEMQKQYYRALLQKDLEVVNAGGERKRLLNIAMQLRKCCNHPYLF QGAEPGPPYTTGDHLIENAGKMVLLDKLLPKLKERDSRVLIFSQMTRLLDILEDYLMY KGYQYCRIDGNTGGEDRDASIEAFNKPGSEKFVFLLSTRAGGLGINLATADVVILYDS DWNPQVDLQAQDRAHRIGQKKEVQVFRFCTEYTIEEKVIERAYKKLALDALVIQQGRL AEQKAVNKDELLQMVRFGAEMVFSSKDSTITDEDIDRIIAKGEEATAQLDAKMKKFTE DAIKFKMDDTAELYDFDDDKDENKLDFKKLVTDNWIEPTSRRERKRNYSESDYFKQAL RQGAPAKPREPRIPRMPHLHDFQFFNTQRLNELYEKEVKYLVQANQKKDTVGEGDDED QLEPLTVEEQEEKEQLLEEGFSTWTRRDFNTFIRACEKYGRNDIKNISSEMEGKTEEE VQRYAKVFQERYKELNDYDRVIKNIEKGEARIYRKDEIMKAIGKKLDRYKNPWLELKI QYGQNKGKLYNEECDRFMLCMVHKLGYGNWDELKAAFRMSPLFRFDWFVKSRTTQELA RRCETLIRLVEKENQEYDERERLARKDKKNMSPAKRSSSRSLDTPPQSSSKRRRQSYT EANAGSGRRRRG</aaseq> |
| Gene Sequence |
<dnaseqindica>211..699#1275..1406#1552..1655#2252..2364#4481..4578#4708..4887#4965..5186#5342..5476#5561..5843#5930..6003#6236..6456#6535..6622#6723..6816#6899..7087#7441..7472#7614..7693#7790..7879#7983..8052#8312..8357#8442..8500#8660..8825#9001..9179#9258..9464#9601..9705#9808..9828#atttctttcctcttccgtttcttcactagttcatttcacgccgcccccgcgcgagcggcgacaaggcgaaaccgcttcaatataagatcaccccaatcccccaattcggcaactccaatccaattcaattccccacccccgatccgcctctcgcaaatctcccgaaaccctagccgccaccgccgccgccgccgcctcgagcgaggcgtgatggggaagccggggaagtatggcgacggcgacgacgacgactcggaggaggagcagctctccccttcgtcttccgccggcgaggaggaggaggaggaggtagaagaggaagagggggaggagcagcaggaggagcagggggaggaggaggaggggtttagcggggacgaggaggagcaggaggtggagggtgaggcggatggggagcaagtggaggaggaggaagaggaggagtctagtgtcggggaggaggaagcagaggcggagggtgaggaggaggaagaggaggtggaggaggagcagggggctggggaagaggaagaggaggaggttgatgaggaggagatcgaggcggtcaccaccggcgccggaggggacgacgacgacgaagaagtgggcgatgacgggggcgcggaggaggagtcgcagtccacggaggacgacgaggtcgccgccgggaaggatggcggcggtgaagatggcgacaaggtgggtgtggcacggtttggtgatctaggtgctggtaggggttgggtggtttatgtttgaatctgttgataggtggtagcgattatgctatgatttctctttttctgaaacgaaatcagcagatttccgttgattatacagatttttttcctgtttccctctgtttagctgtaaagtaatctgttatgcgtctatactcctgtagacatttgagggatgatattagtgttcatttaaaattgtagattgtttttttttagaaagagaggcagtcctctcccgtgcaataggttgtaaattttagtaaagttgttcttgtttggtccatctggtgaggattcctgtatccgtttgggttttctttatgcgtaagtgtgctgtagcaaaatgtttaaagcttcgtggtatatttgtgctactgaagtagttttttatcgcaattagccaatcagcatggtttacagttatcaaaggagtgattgttagttctaaaaaagagtttcaaaatattttgaaggggagtgactactctgagtgtcactcaacatcactgagttgcttgtcttcaattgcagttggaagatgctactggaaacgcagagatcgggaagcgggagcgagcaaagctcagggagatgcaaaagctgaagaagcacaaaatccaggaaatactggatgcccaaaataaggccattgatgctgacatggtttgataagttcccatatctcctagcgattaacctccaaataggaataccttattgacatgtgatctaaatcttctgtgcttttttgcgttcacttcatggctttgagttctgtggtagcttagaatattaaattcatggacagaacaacaaggggaagggacgtctgaagtatctcctgcagcaaactgaaatatttgctcattttgcgaaaggaaaccaatcgacagagaagaaatcacgtggaaggtatattcttccttggataaatatgctaaccccatactttccattaagggaagttactgctaaccatttgtcatttgttacaacagtacagtgccaatatttttctgtaatatgcgaaatactttctgtttttgagacctggtagtgatgacttgccgtcccattcccatcttcatagccttgatgaactccaagatatcatgtagtgcattcctttagctgaacattgtcaggattattaagaaaagcttttctctattggaacttcaacatattcagatttcagatttaaagtagttaaaaatggtcaagctgttaaaacatgcacctaaccagtcatctttggctcatttatcattttcagtaaattttgatgagtgcatagagctttcaacatctttttgtgccctagctatctagtattctagtatcaagtggtatttgttaaacatatttcaataatttttggggaatggtactacttaccacaacattcagatctatttatccagggcatctatctcttcttgttgtggtacatatttctttgttcttcataggtcttctttgtttagctaatgtggtaaggatcttaggggacgtcatgcatcaaagatgacagaggaggaagaagatgaggagtatctcaaggaggaggaagatgcccttgatggtgcaggagggacccgtctggtttcacaaccatcatgtgagcatttgcttgatgattctgtcaaaccttttgttttacaagccagtcttaaatgcagtttgtgtaacgaaaatgtttattttgcatggaaggttcgatttgtttgatggcgaaacagtatagaacggttcgcaatttcattgcgaatttgcgattacttgtgctgaattaatcaacattttgtgatttttttttctgttcggatggtgtttaaaacgaaagctgttgtgagggaatgcagtaaattatgttgcttcatctcacggcctgttatggaaaggaaaccctggttctgatttctcaactactcttgctcctactggcaggaaaggagataatatctatagccattatttgagcaagactgggtgaaagtgttaatgttgtttgtctgtgttagtgatgaggatgtagagcctgatggccataactagatttgtattctccgtgttttttttgtactggataggaataggatgtgctcctccccctttttttttttttctgaaacggatgtaggaactcagccgttaatttaagactgggaaaggtgcaataaaataccaacaccaacccaagtcaagaagacgtaccaatagagagaacctctcataaagaccactcacacattttgttcggcctcacccaagtataaagccattgtttcgatgaaatgcaacctcaaacactttgactagaacataggcgttgctttgaatttacaatattacctagacactcgtgtccaattttttttgccgaatcggaccccagaatccaagtcggcttccgacatccatgctggattccaagaagtattttgtgtgcccaattcttttgtgccaaaggcacaccgtcgagaagacataccaatagagagaacctcccataaacaccactcacacattttgttcagtgtcacctgagaataaagccattgtttcgatgaaatgcaacctcgaacactttgactagaacatatgtgttgctttgaatttattttgctgaatcggacatcccgagtccgaatcgggttttgacgctcgtgttggattccaggaaggattttgtgtgtcaaattcttttgtgccgaatcagacacactagttcgagtcggattccggcacacgtttccatgtccacgtgagaattatactaattttcattggcttacacgtgttgggcaaggattccgttccatccaaacaaagctataaaattgtttgtccaagtttgctagttttaattctcctaaaatgtttcatctttaggtcaattcaaatttattttgtcattgatcagacgattgatgatattcccccgaaaaagcccttgaaatgatatctatgaggactccgattagggagcttttcacggcaccctgatataattaagcgtaaacggttcgaatatttgctccactgaaaacagacaaaaaggacgcggtaaatttagaaaggaagaagaaactgacttctgtctttctaaaattgttcttttgcatgctgcttgtttagtcgacatgcttttgttcttgtgtgaaccaaggtccaagtcagcgaccgtatgctgtgcaacatcagctttttgtcaaaatagtctgttttttaaagaaaaaaacatcaaagcagtctgtagaacaaaagttgttagttttttatctattaaagaggaggaattagagggattaattgtggctttcatggattgcacttaattgtagaagaaaaatacatacaacaggtacccggtagtttctacccggtagatctggacatacccgatctgctgctgctcagctggctctctcttagttcgtaggtgtgtgtgatagcaaggtgcaattacgctagttgttgtcctagactcctagttcattcatttgattatattttttggggataagtctgcatccttcacagcatttaacccgtgtttatgtccagatgttgttatcttcacatccttgttataactgaatggtagtgtttatgtacaaatgccctggtagctttctttgtgattaaaatgagtccgtcacagactcgtgcaatctcatcagtttatgttaactactaaatgatcattatattcttgttggtttacttgacaggcataaaaggaaagatgagagattaccaactagctggacttaattggctcatacgcttgtatgagaatggcatcaatggaatattggctgatgagatggtactctattgctcttcattgttgttacacatatcaattaacattaagattatacttattgactcttatatggttatgcttaattcaacttcatgagctcatatttggcatgaaatccttctcgttcagggtctt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tatttacatcgcattctgttcatctttactagaaccacacactgttttggttattacagtaaagtaggacctcacccacttgtttttctcacagggaaggagaaggcgagggtgatctgattattgttcgttcctccccccatatgcatttagggagctcatttggaggttgacatgaaacccaaggggaaaccccagatacatcccaattgtctagcagtagctttagctcaaaaaaaaaaaaaaaaactagcagacataactctagtgagatggttagcttgtataccggttaaagtggttgtgttttaaagttttaaattggacgggcaacattacaaattttaggtgatcataactataacaagtagttgatctctcttttggagacatcaatcaaataaaacaaagttgcttttacctgt</dnaseqindica> 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