Difference between revisions of "Os05g0153000"

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(Created page with "{{JaponicaGene| GeneName = Os05g0153000| Description = Gelsolin family protein| Version = NM_001061211.1 GI:115462152 GeneID:4337837| Length = 6063 bp| Definition = Oryza...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os05g0153000|
 
GeneName = Os05g0153000|

Revision as of 20:04, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os05g0153000

Description

Gelsolin family protein

Version

NM_001061211.1 GI:115462152 GeneID:4337837

Length

6063 bp

Definition

Oryza sativa Japonica Group Os05g0153000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:3028980..3035042

Sequence Coding Region

3029254..3029297,3029806..3029905,3029996..3030064,3030166..3030402,3030487..3030664
,3030749..3030884,3030971..3031133,3031400..3031550,3031635..3031720
,3031791..3031946,3032234..3032302,3032393..3032461,3032569..3032706
,3032840..3032968,3033068..3033215,3033298..3033308,3033654..3033794
,3033883..3034011,3034279..3034341,3034462..3034794

Expression

GEO Profiles:Os05g0153000

Genome Context

<gbrowseImage1> name=NC_008398:3028980..3035042 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:3028980..3035042 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaagggcgtcgacgatgcattcctcggcgtcggcgacaagccgggactggacatttggtgcattatgggtagcaatctaattgcaattgaaaaatcattgcatggcaagttctacactgggaacacctacatcatactaagtaccgttgagcttaaaagcggagttcgccagcacaatgtgcactactgggtaggggaggaagccaaagaggaggattgtctgacggcctctgacaaggctattgagttggatgtagcactgggctcgaacacggtccaatatagggaaacacaaggcgaagaatccgacaagttcttgtcatacttcaaaccatgcatcatccccatacaaggtagcttgtcttcgcacatgagaatatatggagataaatcaaaggatacaacaatgtttaggtgcgaaggagagcatgtagcccgtgtaacagaagtaccgttttcacggtcctccctagatcacaaggcagtgtttgtcgtggacacggaatcaaagatcttccttttcagtggatgtaactctagcatgcaaacaagggctaaggctttagatgttgttaagcacctcaaagagaaccgacattgtggcagatgtgagattgcgactatagaggatgggaaacttgttggtgactctgatgctggtgatttctggaacttatttggaggctatgctcctattccccgtgatgtacaagacacggttatgacagaactgatgactacctcatccaagaaactattttggattaacaagagaaaccttgttcctgtggagacaaatctgttagaaagagaaatgctgaactcggacagaaattacattctggactgtggcaccgaagtattcctatggatgggtatgacaacactggtttctgagaggaggacatcagttactgccctagaagattatgtgcgttgtgaaggaaggcaatcgaatgcacgttcagttatattgacagaaggtcatgaaaccgttgaatttaagatgcattttcagcattggcccaagaatgctgtgccaaagttatacgaggcagggcgggagaaggtggcagcaattttcaagcatcagggctatgatgtcacagaaatcccagaggataaacctcgtcacttcatcagttgtaatggtagtctgaaggtttggttggtggacaatggttctgtaaccctgctttgcactgaggagcaggaacaactatacaatggggactgctatatcatacggtatagctacatcgaagacggaaaagactatcatttgttctttgcttggtctggactgaacagcataaatgaagatagagttgcagcagcgtcactaatgtcaggcatgattgattcagtaaaagggcatgcggttgtggcacaagtattcgagggcagagaaccagaaatgtttttcctagtattcaagtcattgatcatattcaaggggggcaggagtatggcatataagaacttcgtttctcagagaagcgatgcaaacggatggtaccagaaaaatggggttgctctattccgggttcaagggctgaaacatgattgcatacgagccattcaggttgatctggctgcaagttcacttaattcttcgcattgttacattttgcaagctggtggttctttctttacctggctaggaagcctttcttcaccaagtgaccacaatttacttgacaggatgatggataagttgtgtccactgaaacaatccttgttggtaagagaaggttctgaacctgatcgcttctgggaagcattaggcggaagatcagaatacttgagagaaaagcaagtcaaggattggcctgcagatccacatctgtatacttgtcatttcgaacaaggtctcttcaaggcaaaggaggtattcagcttctctcaggatgacctggtaactgaagagatattgatactggactgcgtcgaagaactccatatttgggttggacatcaatctggtgttttatccaaggagcaagctcttgatatcggcaagatgttccttcaggcaggcattcatcaggacggacgacggccaatcgacacgacaatgtatatcgtcactgaaggggatgagcctagatttttcacgagcttcttcaactgggattattccaagcaaacaatgcttggcaactcatttgagaggaagctggcaatcctgaaaggaatttcacaaaagctggagacaccggagagaagcctacgcaaatcatcatcgtcttcgctgccgagaaggtcgccggggacatcgtcgtcggagccgaccacgccggagcagcgagcggcggcgaggacgttcgcctcggcctctaccgggaagctactcagggagagatcaccggccgcgctgtcaccgtcgctgtcgacgccttcgccgtctccgagaagccgctcctccgcctcctcgtcgccggcgtcgtggaactcgacgccgtccacggtggcgcggcggctcttcccgccctcgctgcacgcgtcggcggaggcggttgccaccgggacccctcgccggcggtga</cdnaseq>

Protein Sequence

<aaseq>MKGVDDAFLGVGDKPGLDIWCIMGSNLIAIEKSLHGKFYTGNTY IILSTVELKSGVRQHNVHYWVGEEAKEEDCLTASDKAIELDVALGSNTVQYRETQGEE SDKFLSYFKPCIIPIQGSLSSHMRIYGDKSKDTTMFRCEGEHVARVTEVPFSRSSLDH KAVFVVDTESKIFLFSGCNSSMQTRAKALDVVKHLKENRHCGRCEIATIEDGKLVGDS DAGDFWNLFGGYAPIPRDVQDTVMTELMTTSSKKLFWINKRNLVPVETNLLEREMLNS DRNYILDCGTEVFLWMGMTTLVSERRTSVTALEDYVRCEGRQSNARSVILTEGHETVE FKMHFQHWPKNAVPKLYEAGREKVAAIFKHQGYDVTEIPEDKPRHFISCNGSLKVWLV DNGSVTLLCTEEQEQLYNGDCYIIRYSYIEDGKDYHLFFAWSGLNSINEDRVAAASLM SGMIDSVKGHAVVAQVFEGREPEMFFLVFKSLIIFKGGRSMAYKNFVSQRSDANGWYQ KNGVALFRVQGLKHDCIRAIQVDLAASSLNSSHCYILQAGGSFFTWLGSLSSPSDHNL LDRMMDKLCPLKQSLLVREGSEPDRFWEALGGRSEYLREKQVKDWPADPHLYTCHFEQ GLFKAKEVFSFSQDDLVTEEILILDCVEELHIWVGHQSGVLSKEQALDIGKMFLQAGI HQDGRRPIDTTMYIVTEGDEPRFFTSFFNWDYSKQTMLGNSFERKLAILKGISQKLET PERSLRKSSSSSLPRRSPGTSSSEPTTPEQRAAARTFASASTGKLLRERSPAALSPSL STPSPSPRSRSSASSSPASWNSTPSTVARRLFPPSLHASAEAVATGTPRRR</aaseq>

Gene Sequence

<dnaseqindica>275..318#827..926#1017..1085#1187..1423#1508..1685#1770..1905#1992..2154#2421..2571#2656..2741#2812..2967#3255..3323#3414..3482#3590..3727#3861..3989#4089..4236#4319..4329#4675..4815#4904..5032#5300..5362#5483..5815#tgctgctgctgctgtcctaccaaacttttactactcctaccaccaccagcttcttgctcgcctttccctttctctccctctctctctctctctctcttctctcctctctctgcatcctctgctcagtgctcattccatttcttctcaactcgcctcagctgcatcctcatcttggtcagtgagcgagtgagtgaagtgcagagctatgcctgtgctgcggcggtgagctttgcagcgacctcctctctctctgctgctgccggcgacggcggccatgaagggcgtcgacgatgcattcctcggcgtcggcgacaagccgtacgtcttctctctcgatctttagctttgctgtttcttctttttttgtttgattccgtttggttgtattgttctgtatctggatgatgaagctggaatcttgggggattggtgtttgaatatgccttcgcaagattctcatcctctctcctttgcttttaaggtgtttggttacaaaatcaaaatgtacttgcttggtaattaatttctactcaagaacatctacaaatgcatcttctctatctgaatggagtaaaaaacaggagaactttgttgagttattttattgctatcacaagggaacgtgtggtaggttttttttttaaatacaaagacaattacttagaactctacaatcttggtaggaatgggtttagtaaaattcaaggcggtcaaagtcctgtgtaactagtgatgccattcttggttttacctctgtgctgtaagtgttggggataaatgtagcctatgttgtttgtcaattaaggaagataatctatggttccaggggactggacatttggtgcattatgggtagcaatctaattgcaattgaaaaatcattgcatggcaagttctacactgggaacacctacatcatactaagtgtaagtttctcaaaagtcagattcagctgtaacattggtcatattttgctgatttgcgcaagcgaattcacatgatttacgatgtttcagaccgttgagcttaaaagcggagttcgccagcacaatgtgcactactgggtaggggaggaagccaaagaggtgtgccactgcagaattgatctgtttatagctacacttgttttgcttggatatacattttgcttatgactttgtctgtctcctgcattgtgaccacacaggaggattgtctgacggcctctgacaaggctattgagttggatgtagcactgggctcgaacacggtccaatatagggaaacacaaggcgaagaatccgacaagttcttgtcatacttcaaaccatgcatcatccccatacaaggtagcttgtcttcgcacatgagaatatatggagataaatcaaaggatacaacaatgtttaggtgcgaaggagagcatgtagcccgtgtaacagaagtaagaatttctatttcaaaattttccgacatctttggtgtttgctgatgtaagataaccaatgctattctaatgctacctcaggtaccgttttcacggtcctccctagatcacaaggcagtgtttgtcgtggacacggaatcaaagatcttccttttcagtggatgtaactctagcatgcaaacaagggctaaggctttagatgttgttaagcacctcaaagagaaccgacattgtggcagatgtgagattgcgactataggtaccggtactatatacaattgtttcttccataagcatcgctagaaggttactgaaatttcggacttcttatcatcaaccatagaggatgggaaacttgttggtgactctgatgctggtgatttctggaacttatttggaggctatgctcctattccccgtgatgtacaagacacggttatgacagaactgatgactacctcatccaagaaactattttggtgactaagcccagttttaattcagatttcattagccctgagttaatacgtagcaatttgtttcttagccattttcctgtctgtaggattaacaagagaaaccttgttcctgtggagacaaatctgttagaaagagaaatgctgaactcggacagaaattacattctggactgtggcaccgaagtattcctatggatgggtatgacaacactggtttctgagaggaggacatcagttactgccctagaagtaagatggaatatgattatgtttcttttcattattatacaatgttcatataatcatgtagttgtatttctagagtaactagataaacaaccatcctagtttgcctcatgatatccgtagcagaacagcagaagatcagaaaaaaatggccacagatttgaatagctgcaaataagttacaggcagaacaaacaaagtgtgccagaacatgtgtgaatacttgaatacactttagtgtgtttgacaccaacttctactatttttaggattatgtgcgttgtgaaggaaggcaatcgaatgcacgttcagttatattgacagaaggtcatgaaaccgttgaatttaagatgcattttcagcattggcccaagaatgctgtgccaaagttatacgaggcagggcgggagaaggtggcaggtgcatggaccttagttattttgtgtatcaattggtttcgttaagagttcagaaaatttggtctaatacagcaccatggtgcagcaattttcaagcatcagggctatgatgtcacagaaatcccagaggataaacctcgtcacttcatcagttgtaatggtagtctgaaggtaaaactcctttgcctctatgttgatatgtgtgaggctgtatcttgaaactgaataaaatatattacaggtttggttggtggacaatggttctgtaaccctgctttgcactgaggagcaggaacaactatacaatggggactgctatatcatacggtatagctacatcgaagacggaaaagactatcatttgttctttgcttggtctggactgaacagcataaatgtgcgctctttgataacttccttgctaacacatcttttagagaattttagtcttatttctacattcagaaaccacgaggaatttgttaaatggtgaccaaactgtgaaaacttctttgctaagaaccagttcaaatttcctgctgaaaggaaagtctgtcaaaaacaaggtccattggaaattgttccagtacttgtgcttttgcttcactttgtttaataaacatataatgtgtttgttactgttatactttcatttttcttaatttagttagtgcttcactacaggaagatagagttgcagcagcgtcactaatgtcaggcatgattgattcagtaaaagggcatgcggttgtggtaagctactccagtcctttcatctacaacttcagaaacttcacaaatttcatttccatgatattgtaaactttcaatatgtaattccaggcacaagtattcgagggcagagaaccagaaatgtttttcctagtattcaagtcattgatcatattcaaggtatacattgtgaatgtttttacatgtagtgtatgaagctgaataataattataaaggaatctctagatataaaattctggagtttgttgactccttccatttccaggggggcaggagtatggcatataagaacttcgtttctcagagaagcgatgcaaacggatggtaccagaaaaatggggttgctctattccgggttcaagggctgaaacatgattgcatacgagccattcaggttgatctggtgagttggtaaaactgtattaagaaatgcaaaatacacaattttctcctctgtttgaatcacatttctattttttctcactaactgctgttgtaagcttttctggtgttttgatcactcaactgaattgcaggctgcaagttcacttaattcttcgcattgttacattttgcaagctggtggttctttctttacctggctaggaagcctttcttcaccaagtgaccacaatttacttgacaggatgatggataagttgtgtgtaagaataacactgcaagcaaaccccttattcttttttgcgatgttccttgataaatgagaagtattgccttgtgaattttcttgtattttttggcagccactgaaacaatccttgttggtaagagaaggttctgaacctgatcgcttctgggaagcattaggcggaagatcagaatacttgagagaaaagcaagtcaaggattggcctgcagatccacatctgtatacttgtcatttcgaacaaggtatagaaatgctattttgccgtgcctgaaaaagcctccatgcacataagcttttctaatcaaaatatatgatttttttcaggtctcttcaaggttagtgctacctttatgattcaagatgaacacaaagggcctgttcactttgatgccattttcaatcttaccaaattttggtaaagttgccaaaaaagtagctacatttagtttgctgtcaaattttggtaactatgtaagaaatcatgccaaaattttggcaagttactgaaattttggtatagttaccaaaattttggcaatgccaaaatttggtaaggttttttttggcatcaaagtgaacaggcccaaaattttctacaaggatacagtcagctactagtagcttgcacataaaaggttgtgaaggttgagaactttttggttgcggtttctatctttcaggcaaaggaggtattcagcttctctcaggatgacctggtaactgaagagatattgatactggactgcgtcgaagaactccatatttgggttggacatcaatctggtgttttatccaaggagcaagctcttgatatcggcaaggtactctattattccaatttccttgtgatctctgatctatcaaaataaattttccacaggaagtctcattcatcaacattacctgcagatgttccttcaggcaggcattcatcaggacggacgacggccaatcgacacgacaatgtatatcgtcactgaaggggatgagcctagatttttcacgagcttcttcaactgggattattccaagcaaacagtaagtgcacatacatgatcatcatatcattgtcgataaaccagacatgtccttctccttccattttatgaatcaagaactatgcagtgaccagcagggtttacgttgttgacgaaaaatgatcgaaaaccacgaaatttcaaatggttttcgagaattcaaaactgaaacaataaaattcaattgaaatttgttgaaaaatgccgtacctctggggatcgggatctggcactcaattggaaaaggttaacctgtttgcaaatgcagatgcttggcaactcatttgagaggaagctggcaatcctgaaaggaatttcacaaaagctggaggttaatgaatcaactctcttacagaatattgttctacctagaaatttcgaattaactcgaaccttacctgatctttcaattagacatcataatttttgggaattttctgatgcatttcagacaccggagagaagcctacgcaaatcatcatcgtcttcgctgccgagaaggtcgccggggacatcgtcgtcggagccgaccacgccggagcagcgagcggcggcgaggacgttcgcctcggcctctaccgggaagctactcagggagagatcaccggccgcgctgtcaccgtcgctgtcgacgccttcgccgtctccgagaagccgctcctccgcctcctcgtcgccggcgtcgtggaactcgacgccgtccacggtggcgcggcggctcttcccgccctcgctgcacgcgtcggcggaggcggttgccaccgggacccctcgccggcggtgagcttcagctaacgctcacctgcaactgcatatgcctgtaccattaagaatttgagattcagatgaaattcaaagaacatcggccatctttttacaaggtccctagattttcaaatttaaattaggtttttagaggaaatttaaattaagtttcctctactgcaacgaagaaaacaaagcaccaaatatgaatatgaattaactaaggcatgtttgtttcagcttatgattattataatatagattatt</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0153000, RefSeq:Os05g0153000