Difference between revisions of "Os05g0162200"

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(Created page with "{{JaponicaGene| GeneName = Os05g0162200| Description = Conserved hypothetical protein| Version = NM_001187302.1 GI:297723734 GeneID:9272304| Length = 10883 bp| Definition...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os05g0162200|
 
GeneName = Os05g0162200|

Revision as of 20:04, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os05g0162200

Description

Conserved hypothetical protein

Version

NM_001187302.1 GI:297723734 GeneID:9272304

Length

10883 bp

Definition

Oryza sativa Japonica Group Os05g0162200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:3630711..3641593

Sequence Coding Region

3635911..3635917,3636275..3636348,3636658..3636754,3637770..3637822,3637977..3638072
,3638210..3638407,3641293..3641424

Expression

GEO Profiles:Os05g0162200

Genome Context

<gbrowseImage1> name=NC_008398:3630711..3641593 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:3630711..3641593 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcgtcgtggctgaggagcgcggtgagccgggcggggcggagcggcgtggcccgcgccgtcagggggtacgccgacgccgtcgcgcaccacgccggccaggccgtcgccgacatcctccaggaccgcacggactacaaaagttttaagaaaacagtagcacgcttggaagaggcagcagtttcatgccgtggaggcgaaagagttgaactgttaagacgttggttgggagcgttacaagacatagaggctgaacttagcggatcagatttgaaggatccagaagatcgtgatccttctagtgaaacagatatttcaaaagcaccattggctttgttttatgatgctgacattgaaggagggcctatgaacttccgtgatgtattcctatacagtcaagcactggaggggattacactgtccatggttcttgaagctccttctgaggaagaagtttctcttcttttggaaatttttgggctgtgtcttactggagggaaagaagtcaacaagaaaatcatggacactgtacaagacttggccaaggcgctttcaaattacaaagatgaagtcctggtgaagcgtgaagagctacttgaatatactcagagtgtcatttcagggctaaagaggaatgctgacattatgagatgctga</cdnaseq>

Protein Sequence

<aaseq>MSSWLRSAVSRAGRSGVARAVRGYADAVAHHAGQAVADILQDRT DYKSFKKTVARLEEAAVSCRGGERVELLRRWLGALQDIEAELSGSDLKDPEDRDPSSE TDISKAPLALFYDADIEGGPMNFRDVFLYSQALEGITLSMVLEAPSEEEVSLLLEIFG LCLTGGKEVNKKIMDTVQDLAKALSNYKDEVLVKREELLEYTQSVISGLKRNADIMRC </aaseq>

Gene Sequence

<dnaseqindica>5677..5683#5246..5319#4840..4936#3772..3824#3522..3617#3187..3384#170..301#atgctaatgaaaaccccaaaaaaccatcactaaaaccacgcgagggaggagagtaggagacgactccaaaatccaaatccagtggtcgccgtcgccgtggtcggtgggtgccgcgcggaaaccctagcttcccccgcgggtggaggaggaggaggaggagaggggggagatgtcgtcgtggctgaggagcgcggtgagccgggcggggcggagcggcgtggcccgcgccgtcagggggtacgccgacgccgtcgcgcaccacgccggccaggccgtcgccgacatcctccaggaccgcacggtgagccgccccctaccgcccgccgccgccggcttctacacccccccaccttcctctctagggtcaatatggagtcgtgattcgtcgcaggagctgcacgccgatgtgtgattcgctagttaggtatcggggagcttagggttttgctctgtccgcgttgcggattggggatttggttgcttcagtctgggtgtcagggtgtgggatgtctctttgttgtgtagtagagcagatgaatgtgtggtttccatgatgtttcaagtttcaacatgcctgagctagcggcattttctgtagagggagactgtcagattaggcatatgtttggaaatgggcgtgtttttcatttataggcttggtttgatctctttaattttggattttggagtcctggtgaaatttttgtaggggggctaaggtccttttactcctatgaacttgggggtatgtcggtggtgtcatatcatctgattgaaatttgatgctttaggatgttaggtgcaagatttttttttttgaaaatatatgtttttttaccgaaattgcaagaatatactgattagggaaatatttgcgcaaatataccgccgtcgctctttagtttagcgagatcgcgatctcgcttaacggattagcgaaggtgatagcgctatcgctaattgaaaaagcggcattgctaatccatcggtatcgcacccccacgatgcgataccaccggccatctgacgcaaacacagaccgaggtggtgggccccgcggcaaagcggtctcgctctttgaaatagcgagagcgcacgcggtaaagcgagaccgctgctgtgagaagtggcgtggcccacagtcgctaacactgtgccaaatagaaattgaatatatatttatattgaatatatatttattgaaaatatatataggagtagagagatcattccagagcgatttttgcaaagttcacagagaatatgaatttacaatatgtcatatttgtatacggccaccaaaataggaacctttgcatattcacagacacgatcttgtgacagaaaccgtgtagcgagttcaccaactacctagtttctgccacaagatcgtgcctaagaatttgcaacaccgaggatatgaatctgtagtaggtcatattcacaaacggacgccggaacatgaacaaaatagtgggtgtaagaatctataaaaaaataacctttgcatattcagactcggtcttgtgacaagaaccgtgtagcgagttaacgaactacacatagtgagttcaccaactatttagttcttgccacaagtcgggtcgaagaatatgcaacacacagttggataaagcagaaggtttatgaagaacagatgtagttgtgcgcttcatctctacccgtttggttgatatttataggggtcagaagatagaaagaaggtgtgcaacgtcttacatgtgggtgataatgggttgtacaaagagacatcatgattaatttgggctctgtagtgactagaaagagacgagtacactttcgacgcgtctgtagtgaatagaaaacgacaaataaactttcggcgcgtcgcaatcagagaactattaattgcttcactagttcactgtttgcttcactaatgatgtgggtacgaatgaacaaaaatgtgactattttaagcttcactgttgatgactgatggcgacacgagtaacatgaagcctaaaatagtcacatttttgttcattcgtacctacatcattagtgaagcaaacagtgaagcaatcaatagttctctgattacgacgcgccgaaagtttacttgtcgttttctattcactagacgcgccgaaagtttactcgtctctttctagtcactgcagagcctaaattacacataactacgaaaagtcatgaaaaaacatatatactttctccacatgaaatatcaacggcttaatcacacatgaaatataaacgcaattagtggatcagtctcgcactcgaagagagcgatatcacgcttggtctcgctatttggaagcacgagatcgacggtgagccgcgccagcgtcaggcgtcgctctcgcgggccccacaacgcatggtattgcgcaatgcttgcggtgtctcgctttttggcacagcgatagcgactgtgggccacgccgcttctcacaacaatggtctcgtggatacaaagcgtgataccgcgcgtgctctcgctgtttcaaagagcgagaccgctttgttgcggggcccaccacctcggtctgggtttgcgtcagatgaccggcggtatcgcatcgcgggggtgcgagaccaagctgctctcgtgcttttggagtgcggcaccaatggattagcgctgccgctttttcaattagtgagagcgttatcgccttcactaatccattaagcgagatcgcggtcttgctaaactaaagagcgacggtggtatatttgcgcaaatatttccctaatcagtatatccttgcaatttcggtaaaagaaacatatatttcaaaattttttccaatcaccagcaccagtattaaaaagcttggtttggtgcaagggtccaatgcttcagtgcttatgaaaacatataaaattactcatgctttgacgcatagccatcaggttgcacattggttttactgatttcaatctttatgtgctttcacttttaagggctgtgccaagaacgggctcattttgtggttatgttgttttgaattttattttatgccctcctgttgtatggctgggaatagttggtgcctgaaggagattataaattttgaacttgtagtcggcagtgtagtacagatggaccattggcatgccctatttcaatgtttttgtaactcatgtttttccgtgtgatctgctggaactcaggactacaaaagttttaagaaaacagtagcacgcttggaagaggcagcagtttcatgccgtggaggcgaaagagttgaactgttaagacgttggttgggagcgttacaagacatagaggctgaacttagcggatcagatttgaaggatccagaagatcgtgatccttctagtgaaacagatatttcaaaagcaccattggtaagtttgtatgtctcattttcatttctttttcttatgtagtcattttaagatggcattaattcaaaagccttctatagttatctccttgagattgtttggttcatgctgattttagactgaactgttgggatcaggctttgttttatgatgctgacattgaaggagggcctatgaacttccgtgatgtattcctatacagtcaagcactggaggggattacactgtccatggtgagttggtgcaacagttctttcctggatatgtataatctatttcagttgaccttttttttcctgcagccagtttgtactttagttcttagaatgatattatttggtcatacttggtttgatgctatgcactgccaatcttttctataatcaggttcttgaagctccttctgaggaagaagtttctcttcttttggaaatttttgggtgagtctgcttttaagatcacctgctaatatattttctttctttccttttgttttttctaatgttgatggacttttgccagcttgtagaattctctctttaatattattgtgaacacagtaattcagaactattgcttccttcagagactttggatttaacaatacaagagccatgatgtttttcctttccaaaaaagagccatgatgttatttgttgtcagcatgataagcattcctttccagcatccataatagcataataccacatatatttttctcctattatcctataaaccatctaacatttgtcttggtgaaaaaaaaacttagaattgattctattttgccctgtgattttattagggactagaaaaaatgcccgtgcattacaacgggtgaaggctattttaattttattattgttatatggtttagttaaggtgaaattcactgtgagaattcgcttggatatatattttttctagaaaatcatgagctgcaattaggagtccgatcatctcaagttacatgctaagttttttttaaagagatttcttatacgactgttcctgtatttccaaaagcgaacgaacttaaacccgactcagatacagatctgtatttccaaaagcgaacgaacttaaaaaccgactcatatacggatgacgtaccaaagtaccggcaaaaacgtcttcaatttttataatagtagggatttgacagattcatagtgatagttgtatctgttactttattcaatctaagtttgctatttggttcaccattcaactttaacttaggtttcctatgccatgttgttagctttccattaacaattatatgcactcaattgttatatgtaaaatacttattattattaatctattgcacatttttctgcccatcatcagtatgtgtatgtacaatttcagctacttcgactttctctgtcctctgttctctgacctggatcttttgtaatttacaattggtgctaatcttgtttcctacaggctgtgtcttactggagggaaagaagtcaacaagaaaatcatggacactgtacaagacttggccaaggcgctttcaaattacaaagatgaagtcctggtatgcttctggttgtgattaatttactccatccaagttcataattcttgcctagttatttattgtttcattgtatcctagaaaattgtagtttaatcggttttaactagtcaatggagcttcacttctgacaagaacttttcttaaggaaaaaaaaagcttacttcctaccattttttatttttgcaattattttctaagatgcagatttcatgtatgtttgaagtgaaaaactgaattctgatgcacacacgttcaaccttttatacgatagatgtggccaatgatgcattgtatctgtgtcaacaggtgaagcgtgaagagctacttgaatatactcagagtgtcatttcagggctaaagaggaatgctgacattatgaggtgataattgacccgcttatgagactcgtataccatttttgttaagtgttctttaaccttttgctcctacaatctgtaaattgttttcaatcatgagggttttagcttgtgcatgtggcttaaaactctgaaaactgtgttcccttttcctctctcttacaactcacacctcatgtaacaaatgaaagttttcaccgaactttgaaaatttagaatattgtgtatcaatattagaattttttttccttgcaattcttatgaaaccaaggcttccaaatactcttaaagaggcatttggtgcttgcttctcgctatattagcttcttaatttcaagctagtacatgatttcaggatagatgctgaaaccctcgagttgtggaaaaagctagatgagaaggagaaatcacgagcccagataactgaagatcaagataaatcgtcagggaatatttctgttgaaaacattgaggtattacctaattatatatagtatggatttactttcttgtttcttttgttagagtttattgaacagtgctcagtagctaaatgttcaaagcagttcaatgatcaatgctatatggctttggaattaattttgcattggtgaaattgtttgctttttgaatgcttactttccaaatgcagatatttcacagaagtctctagttcagtttgactccatagattttttggctgtatgatacaccctctatccaaacatgtaattggtttggatgttgtcatggtctcccatatgtgtgtccactcatcattttttttaatagaaatatgttggaacattaaacaaaatgaaatgtagatcatgagaaaaacattgcctttatttcagatcaatttatataaactccattggtagtgaaactttgaaaatgttgagtgttgaccacacatgttctaaaacatcacataattttttaaatgaatgcattccaatctggcaacatagtcaccagaaaagtcctagaaataattcgatgtgattatgaacatttgtactatttcctccattactttacatgtattgtgcatctatttactactttcaagtgcttgttaatctgttttgtctgttctagtatgttgttttcaaggttcttaaagaagatacttgcatgtctgccagggtttaaaagaagcacttattgaagtccgtttgtgctctagagtggaagaacttgtactgaagaagaagtcaatatcacctggagactctctggagatccattctcagaaggcaggcttatgtcttactcttctttttataagtttttgagttttgaagttgagatgcaatcctttacattccttaaattgctcatctggtaacccattagaatgcagtctaggttggcaatatgcttttcttggttatactggttctacttttcaggatcaattcagcaggcttttagaaaacaccaatagaagtttaattatgagaaagtttgtagtaagtaggacttgtgtggctcaaaacgctgtactgcttatcttttggtagtcagtagtcaccatgtaagcacaacagttttacttcaagtcattatgtcaataacttctcttgtcctgcaagtatgtggtgtatggattgtaacaatgtcacagcatcttgcagattgataaattaaagatcttggcagattcccttgcgaattcatcctccaaggcagagcagcgtattttggagaacaggttttatttctgaaattgtttttcctgtacgaaagatgttattctattatccataactcatttgtcaacactcaatagtatgtaatatagatttttgctccagttctacatgaaaaatccttgctcaatgatgtgtatatcattctttttctttgaatacttagtttatacttgatatctaatttgctctgaactgccatgtttttttgcaagcgactcctggggtatttaaacagttgattatttgatagtcaaaaccggcacttcagaaattatagttgtagggttgtacttaactagcaatgtattgatttactgattatttaagttctatgttccattttgttttcactgtcaggaagttttatctttgtgttgcttccttttcttttggcatattaattttctagactcattttctttgtatgtttcaaatcgtattaccagcaaatataggtgagattttaatttggcttttataccaggcgccagaaagaagatgctctgaacttccgtgttaagaaggagaatgaagtgagcacagttgagaaggtacaactgctagcctgttgtatatgtggaatgccttgttgaacttataaatttaattaaaaaaataatcaaaatgtttgtcccacttggagcacagggctctcataggaattcatgggggatttccatagtgaaagtggatcttttgcttttctgcaaaatccctatagaattcctgcacagcatagaattcatggatgccaagcacgccacattcgccatttcccttccgctatttacctgtcaatatgtccaatgcatgtgcttgtccagctatatctgtagcttcttatccttgaacatgccatacggaggtgattagtggttacatggttaacatggtgtccaggaacacatttctactgtactatgttaatattttgttcacatcattcgatgtattacatacatatggtacggaatgaatatgtttttaggcttctactctgcttattttgctatttatttaatccttatcttatcttttccttttatatcctgatgtaggaggtgcttgatgagattgctgaattggagaagcagagagatgaacttgaggctcagctgaaaaaggtaccttttccttgacgttagattcccagaagctatgttgtgatttatctccattgtagtttttaatcttgcatgcaccgaatttggattacctaatcttatattctcaatggagaaccacagaattcagtcacattgtggtgtggtagggaagttgtttaactaacttacatattaatcttattaatatggttcattagtaaagcttgaactgtaaatggtgccttgaaaaggtttctctcaatatggaaattgctatacaagacctggcatatcctattggtgacagagacacaaaatctcttagtatgatcaaaatggttcatttggttttggacatcgatctgatcgttatcatcctattatctgagtgaacagatccaacaaagagaattgaaaaaaagaaaataaaaattctctgcaagacaaagaagtctgggaggggaagctttgttagaccatagagattctcttaaatagataatagaaatttgaagctgaattaaaataaacctctgcaagattctcactgaaagaaagtactatcctagactgtaggaatgttgtcaaacaggaggttgaattattatccaccaataagcattaaaccctctagtctagaaaaaaagattaaccatctggacacctcatactatgttctatttgaatttagaataccgttttcacgacagttgtttgaattatgttctttttataaaaagtatttctcaactgcaggtcaatatatcactaaatgctgctgctggacgcctcaagaaaaccagggaagagagggaccaatttgatgaagcaaacaatcaaattatatttaaattaaaaacaaaggtgcttttcccatcatacttctgaagaacttgtttattcccatatgtttgttactcaaaatgacttgtttttctttccatatcaacttaggaggacgacctctcaaaatctatcgcgtcatgtaatgtggaagccaatgtagtcaagacctggatcaatttcctcgaggatacctggcagctccagtcaacatataatgaacagaaggaaaagaaaacatggtacttacgctcgcaactgtggctatacagtcctctgattgcttattttatttgtagttttccttccatttgaaagaggctagagaactgctacactatccaatctagtgaacttaggtgctgacctgttttatccttttgtaatttgtcgtgaccttctcagtgatgagttggagagatgtgtgagtagttttctgaagttgaccaaacatcacctttcagtcttcaaggtaagtcattcttgtctactgtagtaccacacacgtctctatttcattgtgtctcatctgtgaattttgtatataccaggaggtcctaagcccgtcaattgagagtatccgaacatatgtggataacttggtggtcttgaactcaaggtacttcagtttctctctcttattcaaggtacctattatgtcatattgtcttaatagataagggttggatttgtcttatagggaagagacaaaacaagatgaagatgatgaagcatccgagaagacaaacccacgaataagccttgaagaggaatatttggaaactgaaaagaaggttcctactctgccacttaagaagcgtaatcttatattcaagcgcaatatttattttaccagttgatttcctatgcatgctttcgtatttatcttgaaatggtactattgaacatacttgcagtggtctccaaactgatgcagtcatttgtccaataaattattacatatgttctctagtttgacacatattctctagtttgacacatattctctagtttgacacatatgttctctagtttgacagctgttaagcctgcttggtttcatatgtaattagctgatgacggtggcaatattttcagatcataattgctttaagcattgctgatcacataaagaagttattttactctgagcaatgggctaattctaggtactgtgggctgctctctccttgataaattattttcaaatttacatccacgcaatcgtgctcctctgaaatctgaacactgaacttctatatattcaggagagatgatccagaggtcaagaacctaattgccgagatcgagaaattgaggggagaatttgaatctatagaaaggccaatgctaagcatagaagctaataaatcaaagccactacctgaggagagatctgaattgagcccttcaccaatccaggcacccgctacgcctaaggctgcacacgtcgactctccaaaatctcccatgaagcccgagcagcatctgaatcctgacaatgagctcgcaaacctgggagcagaacttggatcggaggacagagatttttcaggtgaggagattaacgggtgggagttcgatgagctcgaagaggacctgaaaaactgacatagctgggatcaaagcaacaaaaatagcaacatgttcatgtacgccccccagttctgtttgatgtacatatgacaacttcgttcatttgtattgtcgatatttcaggacatgcagattgaactttctaagtcttttaaccttggcaaggcatttgctatttgtttgtcttgccatgagatgttgcatcattacatgtacacttgaatacagattttactgaatactgttgtaacatttgcaaagacagacaataaatgttttcaccgacggtcgatcagtttgc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0162200, RefSeq:Os05g0162200