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| Line 20: |
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| | ==Structured Information== | | ==Structured Information== |
| − | {{JaponicaGene|
| + | [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 4]] |
| − | GeneName = Os04g0390000|
| |
| − | Description = Similar to 2-oxoglutarate dehydrogenase, E1 component|
| |
| − | Version = NM_001059173.2 GI:297602610 GeneID:4335673|
| |
| − | Length = 6761 bp|
| |
| − | Definition = Oryza sativa Japonica Group Os04g0390000, complete gene.|
| |
| − | Source = Oryza sativa Japonica Group
| |
| − | | |
| − | ORGANISM Oryza sativa Japonica Group
| |
| − | Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
| |
| − | Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
| |
| − | clade; Ehrhartoideae; Oryzeae; Oryza.
| |
| − | |
| |
| − | Chromosome = [[:category:Japonica Chromosome 4|Chromosome 4]]|
| |
| − | AP = Chromosome 4:19196735..19203495|
| |
| − | CDS = 19197491..19198981,19199377..19199603,19199691..19200023,19200995..19201241,19201869..19201997<br>,19202080..19202295,19202369..19202492,19202970..19203208|
| |
| − | GCID = <gbrowseImage1>
| |
| − | name=NC_008397:19196735..19203495
| |
| − | source=RiceChromosome04
| |
| − | preset=GeneLocation
| |
| − | </gbrowseImage1>|
| |
| − | GSID = <gbrowseImage2>
| |
| − | name=NC_008397:19196735..19203495
| |
| − | source=RiceChromosome04
| |
| − | preset=GeneLocation
| |
| − | </gbrowseImage2>|
| |
| − | CDNA = <cdnaseq>gtgaggaacctggcgcgtgctccggcgaacccttttgccggtcctgcgccacggtacttccactccacccgcccccggcggttcgccgctcctgtgccccgcgccgtgccgctctcgcgcctcaccgacagcttccttgatggcaccagcagcgtgtaccttgaggagctccagagggcgtgggaggctgatcccacctctgtcgacgagtcctgggacaatttctttcggaactttgtcgggcaggctgcaacttcgcctggcatatctgggcagacaattcaggaaagcatgaggttgctgcttcttgtgcgagcgtaccaggtgagtggtcacctgaaggctaagcttgatcctctcgcgctagaggagcggcctatccctgatgttctggaccctgcgttctatgggttctctgaggctgatctggaccgggagttttttcttggtgtgtggaggatggctgggttcttgtcggagaatcgccctgtgcagacactccgttctgtgttggagcggcttgagcaagcttactgtggtaccattgggtatgagtacatgcacatacctgacagggagaaatgtaattggctgagggataggattgagacggtcaatgcaagggagtactcctacgaccgtcgccaggtcatgcttgataggctcatgtggagcactcagtttgagagcttcttggcacagaaatggacgaccgccaagcggtttggtcttgaaggtgcggagacactgatccctggcatgaaggagatgtttgacagggcagctgatcttggtgtagagagcattgtgattggtatgccacacagaggtaggctgaatgtcttgggaaatgtcgtgaggaagcccttgcgacagatcttcagtgagtttagtggtggtaccaagcctgccgaagaaggggagggcttgtatacagggactggagatgtcaaataccatctaggaacttcatacgataggcctaccagaggtggaaagcatatccatctgtctctggttgcaaacccaagtcatttggaagcagtcgatcctgttgttgctgggaagaccagagcaaaacagtactattctaatgatcttgacaggaccaagaatttaggagtcttgttgcatggtgatggaagcttctcagggcagggtgtagtgtatgaaaccctgcatctcagtgctcttccaaactacactactggtgggacaattcacattgtggtcaataatcaggttgctttcactactgatccaagggcagggaggtcttcgcagtattgcacagatgttgctaaagcattggatgctccaattttccatgtgaatggtgatgacttggaggcagtggttcatgtctgtgagcttgctgcggagtggcggcaaacatttcattctgatgttgtggtggatattgtatgctaccgccggtttgggcataacgagattgatgagccttccttcacccagcctaaaatgtacaagataattaggaaccaccagagtgctcttgagatataccaaaacagacttttagaatctgggaagatatccaaggaagatattgataagatgcagaagaaggtcagcactatcttgaatgatgaattccaaaacagcaaagaatatattcccaataagagagactggctctcagcttactggactggattcaagtcaccagaacagatttcacgaatccgaaatactggtgtcaagccagagattctaaaacgtgttggagaagccatgactactctgcctgaaaatttcaagccccacagggctgtcaaaaagatttttgagctgcgtcgtcagatgattgagacgggcgaaggcattgattgggctgttggtgaagcacttgcttttgcaactcttataattgagggaaaccatgttaggttaagtggtcaggatgttgagaggggtacattcagccaccgccatgctgttatccatgaccaggaaactggagagcaatactgtccgcttgataatcttgttatgaatcaagatgaggaactatttactgtaagcaacagttccctgtcagagtttgctgttttgggctttgaattgggctattccatggagaatccaaactcactggttttatgggaagcccagtttggtgatttttccaatggagctcaagtgatatttgatcagtttctgagtagtggagaggcaaaatggctccgccagaccggtcttgtcgtttgccttcctcacggatatgatggtcaggggcctgaacattccagtgcaaggttggagcgtttccttcagatgagtgatgacaacccttatgttattcctgagatggatccaactctgaggaagcaaatccagcagtgcaactggcaagttgtgaatgtcacaactcctgcaaactatttccatgtcctgcgtcgccagattcaccgggacttcagaaagcctttgattgttatgtctccaaagaatctccttcgacacaaggactgcaaatcgaatctttctgaatttgatgaccttgctggtcaccctggatttgacaagcaaggaacccggtttaagcgtctaattaaagatcagaacaaccataaggaccttgaggagggaatcaagcgtttagttctctgttctggaaaggtatattatgagttggacgaagaaagaagaaaaaaggagcgtgatgatgttgctatatgtagagttgaacagctctgtccattcccatatgacctcatccagcgcgagttgaagcgatatccaaatgccgagattgtttggtgccaagaggaacccatgaacatgggggcgtacagctacatcaatcctcgcctcctgaccgcgatgagggcgcttggtcggggcacgatagacgacatcaaatacgttggaagggccccatctgcagccaccgcaacaggtttctactccgtccatgtgcaggagcaaaccgagcttgtgcagaaggcactgcagcgagaccctatcaactctccattttga</cdnaseq>|
| |
| − | AA = <aaseq>VRNLARAPANPFAGPAPRYFHSTRPRRFAAPVPRAVPLSRLTDS FLDGTSSVYLEELQRAWEADPTSVDESWDNFFRNFVGQAATSPGISGQTIQESMRLLL LVRAYQVSGHLKAKLDPLALEERPIPDVLDPAFYGFSEADLDREFFLGVWRMAGFLSE NRPVQTLRSVLERLEQAYCGTIGYEYMHIPDREKCNWLRDRIETVNAREYSYDRRQVM LDRLMWSTQFESFLAQKWTTAKRFGLEGAETLIPGMKEMFDRAADLGVESIVIGMPHR GRLNVLGNVVRKPLRQIFSEFSGGTKPAEEGEGLYTGTGDVKYHLGTSYDRPTRGGKH IHLSLVANPSHLEAVDPVVAGKTRAKQYYSNDLDRTKNLGVLLHGDGSFSGQGVVYET LHLSALPNYTTGGTIHIVVNNQVAFTTDPRAGRSSQYCTDVAKALDAPIFHVNGDDLE AVVHVCELAAEWRQTFHSDVVVDIVCYRRFGHNEIDEPSFTQPKMYKIIRNHQSALEI YQNRLLESGKISKEDIDKMQKKVSTILNDEFQNSKEYIPNKRDWLSAYWTGFKSPEQI SRIRNTGVKPEILKRVGEAMTTLPENFKPHRAVKKIFELRRQMIETGEGIDWAVGEAL AFATLIIEGNHVRLSGQDVERGTFSHRHAVIHDQETGEQYCPLDNLVMNQDEELFTVS NSSLSEFAVLGFELGYSMENPNSLVLWEAQFGDFSNGAQVIFDQFLSSGEAKWLRQTG LVVCLPHGYDGQGPEHSSARLERFLQMSDDNPYVIPEMDPTLRKQIQQCNWQVVNVTT PANYFHVLRRQIHRDFRKPLIVMSPKNLLRHKDCKSNLSEFDDLAGHPGFDKQGTRFK RLIKDQNNHKDLEEGIKRLVLCSGKVYYELDEERRKKERDDVAICRVEQLCPFPYDLI QRELKRYPNAEIVWCQEEPMNMGAYSYINPRLLTAMRALGRGTIDDIKYVGRAPSAAT ATGFYSVHVQEQTELVQKALQRDPINSPF</aaseq>|
| |
| − | DNA = <dnaseqindica>757..2247#2643..2869#2957..3289#4261..4507#5135..5263#5346..5561#5635..5758#6236..6474#ctctctctctctctctctctctctctctcgccaaccaatctcctcccccctcctttcctcctcctcccgaaccaccggaatccgacgcggcgccgccgcgccaccccgttccgccggctctcttcctcacctctcctccccaggagatcgtcaatctcctcggtaagcaagcaagcactcgggtggttcgagctgtgccctgcgatcgatccccttgcggagttgcgacgcgaatatggtgtctaagtttgatgttacgttagggtttggttggttcgtttgcggcggtgttggtgcctcgtgtgtgatgtgtgtgtgtgtgtgcgggggttaatttggttcgttcgtggatgggggggctgatctggcatcgtgacggtgtcggtgttaattgttaaacctttttcatttctgttccttaacttttgccgtgatgggggtgatcttggagcgctgcgctggtgtaaatcgggctagattttggaggaacgtcacagtgaaattcgtcaataatcgtgtcgttttcctgtcgaatttttggcgcacggtttgatgctgttggggacctaacctaacctcgtgttcttgatgcgatgcaggtcaggtgtttgatcgattgcctgtgggaagcatatgggcggttagattcgtgaagttgagaggaatcagaagacgggaattgtttgaggggactgaatttgatctggaaaatggggtggtttcgggctgcgtccggattggctcgggtggcgctgagtgaggaacctggcgcgtgctccggcgaacccttttgccggtcctgcgccacggtacttccactccacccgcccccggcggttcgccgctcctgtgccccgcgccgtgccgctctcgcgcctcaccgacagcttccttgatggcaccagcagcgtgtaccttgaggagctccagagggcgtgggaggctgatcccacctctgtcgacgagtcctgggacaatttctttcggaactttgtcgggcaggctgcaacttcgcctggcatatctgggcagacaattcaggaaagcatgaggttgctgcttcttgtgcgagcgtaccaggtgagtggtcacctgaaggctaagcttgatcctctcgcgctagaggagcggcctatccctgatgttctggaccctgcgttctatgggttctctgaggctgatctggaccgggagttttttcttggtgtgtggaggatggctgggttcttgtcggagaatcgccctgtgcagacactccgttctgtgttggagcggcttgagcaagcttactgtggtaccattgggtatgagtacatgcacatacctgacagggagaaatgtaattggctgagggataggattgagacggtcaatgcaagggagtactcctacgaccgtcgccaggtcatgcttgataggctcatgtggagcactcagtttgagagcttcttggcacagaaatggacgaccgccaagcggtttggtcttgaaggtgcggagacactgatccctggcatgaaggagatgtttgacagggcagctgatcttggtgtagagagcattgtgattggtatgccacacagaggtaggctgaatgtcttgggaaatgtcgtgaggaagcccttgcgacagatcttcagtgagtttagtggtggtaccaagcctgccgaagaaggggagggcttgtatacagggactggagatgtcaaataccatctaggaacttcatacgataggcctaccagaggtggaaagcatatccatctgtctctggttgcaaacccaagtcatttggaagcagtcgatcctgttgttgctgggaagaccagagcaaaacagtactattctaatgatcttgacaggaccaagaatttaggagtcttgttgcatggtgatggaagcttctcagggcagggtgtagtgtatgaaaccctgcatctcagtgctcttccaaactacactactggtgggacaattcacattgtggtcaataatcaggttgctttcactactgatccaagggcagggaggtcttcgcagtattgcacagatgttgctaaagcattggatgctccaattttccatgtgaatggtgatgacttggaggcagtggttcatgtctgtgagcttgctgcggagtggcggcaaacatttcattctgatgttgtggtggatattgtatgctaccgccggtttgggcataacgagattgatgagccttccttcacccagcctaaaatgtacaaggtatacattttttttcttacctgattaagtccagcatgatgccatgatttatgtttctttcgtctgaatattcatttcagtcctgttctttaatcctgtatgatgtctccagaactagtttatcttgatttcatccgtaatattctctctaccatatgagtgtgaatgtgtgatatctcaataacaccatagagtttatcaactaatagacaaaaaaagagatcaacttttgacttctgagtattttaccccattaagacctggaacaatttttttaatgtgttcagaaactattgtaagttagaaatgatactgattatggataattaaatgctggtattttccatggtacatttgtttgtttacatttggataattgtttgtatttgtatcagataattaggaaccaccagagtgctcttgagatataccaaaacagacttttagaatctgggaagatatccaaggaagatattgataagatgcagaagaaggtcagcactatcttgaatgatgaattccaaaacagcaaagaatatattcccaataagagagactggctctcagcttactggactggattcaagtcaccagaacagatttcacgaatccgaaatactgggtaaacaattctttacttctgatttttggacgattcctgtgtttcccctccatgttttgagtaagtagctttattgcaatcatgcagtgtcaagccagagattctaaaacgtgttggagaagccatgactactctgcctgaaaatttcaagccccacagggctgtcaaaaagatttttgagctgcgtcgtcagatgattgagacgggcgaaggcattgattgggctgttggtgaagcacttgcttttgcaactcttataattgagggaaaccatgttaggttaagtggtcaggatgttgagaggggtacattcagccaccgccatgctgttatccatgaccaggaaactggagagcaatactgtccgcttgataatcttgttatgaatcaagatgaggaactatttactgtaagcaacaggtatgaattatgatccaccgacacattatagtttggatgtttttttatatcgtgcaagtttagcttatgaattgtgcaagtataggtgaccaacaaataagaaaaaagaaatcaggtgattggcaaatagcaaagctgttgttggttatgtaagtggctgtcccacttgtacatgtacacacacaacacaagtacatatgttatcactgctcatcaaatatgccttgagctagttgcaaactttcaaatttcagatcaccatccttagcctttgcacgcatatcagggcgctttggacggctaagatagcacatgccctaatcccacatgtgacatggtagtacaagtaggtttttgtgctactccatttttactaaaacttctatctgaaatgcttaaggttcgacttgttagccttgggagttctactgccaatttatctgctgatcatgacactagtaatttgagcagcccacatattgctgctaggtatgaggtgctgtaggcacatgtaacatgtatgagatcattgctgggatattaaataagctttattttcgtgcattgtaagtactgagatgatggagataattctcggcaataaatattttgatttttttttatttaaaaggttggtttttacatctcacaattttctcaaactgtgcaaaaaataatttgaagcgaaatagaaaatttaaccaaggtctacatcatgttaacttacaaatttagtaagtaataattaagttaaatcagccttttgatgttctctatggagtctacttcgataggtgatactgcctccacttcattcatgattattatggtttaatccagatttattgttacatgatctggtactatttgaacttatgggatgcctccacttcattcatgattatttctttcctttatggttgatctggttttgttgttacataatctgatgtattcaagaatcttaacagttccctgtcagagtttgctgttttgggctttgaattgggctattccatggagaatccaaactcactggttttatgggaagcccagtttggtgatttttccaatggagctcaagtgatatttgatcagtttctgagtagtggagaggcaaaatggctccgccagaccggtcttgtcgtttgccttcctcacggatatgatggtcaggggcctgaacattccagtgcaaggttggagcgtttccttcaggtaccatttttctgtttctgactgcagaaatgtcgtcactagtatcttgtgttagtattagttgcattatcttatcatctgttgacataaaaggaacacaacataacagcactgcttttcacagtgttgctttctcataaactgtgttggcattgccatagttctacagttcatatattttgtataatatatgctgatgccatgtggtgatacaaagttgcggacttttaacacttcactgaaaattcagcattttttttgtttttgtttgtttattagttttccttttgtcataacttgatgactgcgcatagaaatattccgcactgtgactaaccatattatattgtactaactctacttttgacttggaaactgcaccacatcatccatttgtacatcatttattctgcaaggtaatggttgtacacatatgagaaatccatgtcatggatgattgtagttcccctacacttcagaaattgtctgtctggcaaaactagaaagaaatatatgactagaagaactttttttggctgtactatgaacttatttcccaatctgatgcgtgtgctgattttttaaattatctacatcttttttttaacttcaataattgcattgtagatgagtgatgacaacccttatgttattcctgagatggatccaactctgaggaagcaaatccagcagtgcaactggcaagttgtgaatgtcacaactcctgcaaactatttccatgtcctgcgtcgccaggtgaagtatcgtcatagtttttttctacttccctcctgcatgaccatcttcaagtgcatgaaagtatgtcttctatttctagattcaccgggacttcagaaagcctttgattgttatgtctccaaagaatctccttcgacacaaggactgcaaatcgaatctttctgaatttgatgaccttgctggtcaccctggatttgacaagcaaggaacccggtttaagcgtctaattaaagatcagaacaaccataaggaccttgaggagggaatcaagcgtttagttctctgttctggaaaggtaggcattttttcaacctgtacaatcgccgcttcaaaaagtcattatattacttatatttctattattacaggtatattatgagttggacgaagaaagaagaaaaaaggagcgtgatgatgttgctatatgtagagttgaacagctctgtccattcccatatgacctcatccagcgcgagttgaagcgatatccaagtatgttaaaacatgaaatagatcttgttcaaatatctacttcaagttgctatatagagtactcttctttataaaacatgcaaaagcatcagttcatcattgcaccgaggagagaaatatagggtactcttatcatcgcattcagtggtgatgatctagatggcatgagagcatggaatatagaggattgcagcatgcaagacaaaaggatcttatggaacaggagaggaaatatggaaatgataagagaacgatagataccagatgaagctacctgcaatcctatagcatggtccattaaccctaaaaggctgtagagaactaacttgttagctagaacatgttttccaggcattagcattttctaacccaagaagacaggaatcagaacagtaatttcatttgttctcctgatggatcctggtaaacaacaaatgagctaacaatatacaatctttgctgttttgtgccgtgtagatgccgagattgtttggtgccaagaggaacccatgaacatgggggcgtacagctacatcaatcctcgcctcctgaccgcgatgagggcgcttggtcggggcacgatagacgacatcaaatacgttggaagggccccatctgcagccaccgcaacaggtttctactccgtccatgtgcaggagcaaaccgagcttgtgcagaaggcactgcagcgagaccctatcaactctccattttgaacctgtagattttatttggatagccgtgggtaatcaaacctttgatccaacagcaaaattattgcctgtgcagccatttggtgaataatccgcttcggatgtttggtaccgcatgagagaaaccatttgaaacccatgttgggatgcatcattttgtgtttcttaacatcaaattaaaccaagttgcatccaatgcttacttgaggagtagaaataagtcgatgctgaatactgatcttccatgtttttgtgatactacattcttattactgcgcctttcaccatcc</dnaseqindica>|
| |
| − | Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001059173.2 RefSeq:Os04g0390000]|
| |
| − | }}
| |
| − | [[Category:Genes]] | |
| − | [[Category:Japonica mRNA]]
| |
| − | [[Category:Oryza Sativa Japonica Group]] | |
| − | [[Category:Japonica Genes]] | |
| − | [[Category:Japonica Chromosome 4]]
| |
| − | [[Category:Chromosome 4]]
| |
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Annotated Information
Function
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Expression
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Structured Information
