|
|
| Line 20: |
Line 20: |
| | | | |
| | ==Structured Information== | | ==Structured Information== |
| − | {{JaponicaGene|
| + | [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 4]] |
| − | GeneName = Os04g0403300|
| |
| − | Description = Similar to Alpha-amylase (EC 3.2.1.1)|
| |
| − | Version = NM_001059232.1 GI:115458193 GeneID:4335737|
| |
| − | Length = 5370 bp|
| |
| − | Definition = Oryza sativa Japonica Group Os04g0403300, complete gene.|
| |
| − | Source = Oryza sativa Japonica Group
| |
| − | | |
| − | ORGANISM Oryza sativa Japonica Group
| |
| − | Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
| |
| − | Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
| |
| − | clade; Ehrhartoideae; Oryzeae; Oryza.
| |
| − | |
| |
| − | Chromosome = [[:category:Japonica Chromosome 4|Chromosome 4]]|
| |
| − | AP = Chromosome 4:20025314..20030683|
| |
| − | CDS = 20025314..20025412,20027207..20027246,20027403..20027440,20027774..20027900,20027986..20028212<br>,20028334..20028479,20028581..20028699,20029126..20029214,20029296..20029418<br>,20029538..20029573,20029879..20029977,20030057..20030244,20030605..20030683<br>|
| |
| − | GCID = <gbrowseImage1>
| |
| − | name=NC_008397:20025314..20030683
| |
| − | source=RiceChromosome04
| |
| − | preset=GeneLocation
| |
| − | </gbrowseImage1>|
| |
| − | GSID = <gbrowseImage2>
| |
| − | name=NC_008397:20025314..20030683
| |
| − | source=RiceChromosome04
| |
| − | preset=GeneLocation
| |
| − | </gbrowseImage2>|
| |
| − | CDNA = <cdnaseq>atggccatggatgggttcaaggatggatgccattgttgccggtggcagtggctgagtggccctagagcgagcagccgggacgccattgctggccagtgggtttcggatgaaaattttgaagagcaggccgctcgtaatggtggaattatcaagcacggaagggaaatcctgttccaggcttttaactgggaatcccataagcacaactggtggagcaatttggaggaaaaagttgttgacctagcacaatcggggtttacatcagcgtggctgcctccaccaacacagtcattatctccagaaggctatctgccgcagaacctgtactgcctcgactcttgttatggttccctccatgacctacaagcattgcttcggaaaatgaaagaacacaatgtaagagctatggcagatgttgttattaaccatcgagttgggactactcaaggatcgaatgggatgtataatcgttatgatggtatcccagtatcatgggatgaacatgctgttacatcttgttctggtggaaagggcaacgaaagtaccggtgataacttcgatggggttcccaacatagaccatacacagccatttgtacggaaggatattattgactggttgatctggcttcgagaaagcattggttttcaagatttccgctttgatttcacgaaaggttatgcagcgaagtttgtgaaagaatacattgagcaatcaaagcctctttttgcggtgggggaatactgggatagctgtgaatatagcccccctgattaccgtttgaactacaatcaggataaacacaggcagagaattatcaattggatggatagcactggaggactttgtgctgcatttgatttcacaacaaagggtattcttcaggaagctgtcaaaggtgagttgtggcgtttgcgtgaccctgaaggaaagccgcctggtgtcatgggctggtggccttcgagatcagtcacatttgttgaaaatcatgacacaggatccactcagggtcattggccattcccatctgatcatatcatggagggatatgcttatatacttactcatcctggcatccccacggtgttctacgatcatttctatggcaaagatgattccttccatggtggaattgcaaaactgatggagatcaggaaatgccaggacatacatagccgctccgcagtcaaaatcttggaggccagctcagatctgtactctgcaatcgttgacgataagttgtgcatgaagatcggggacggctcctggtgcccgagcggcccagagtggaagctggcggcctctggtgacagatatgctgtttggcacaagctgaccgccttcactggacctggaaatcttccatgggaaggaggactccgcttccttccatcagaagacgcagattaa</cdnaseq>|
| |
| − | AA = <aaseq>MAMDGFKDGCHCCRWQWLSGPRASSRDAIAGQWVSDENFEEQAA RNGGIIKHGREILFQAFNWESHKHNWWSNLEEKVVDLAQSGFTSAWLPPPTQSLSPEG YLPQNLYCLDSCYGSLHDLQALLRKMKEHNVRAMADVVINHRVGTTQGSNGMYNRYDG IPVSWDEHAVTSCSGGKGNESTGDNFDGVPNIDHTQPFVRKDIIDWLIWLRESIGFQD FRFDFTKGYAAKFVKEYIEQSKPLFAVGEYWDSCEYSPPDYRLNYNQDKHRQRIINWM DSTGGLCAAFDFTTKGILQEAVKGELWRLRDPEGKPPGVMGWWPSRSVTFVENHDTGS TQGHWPFPSDHIMEGYAYILTHPGIPTVFYDHFYGKDDSFHGGIAKLMEIRKCQDIHS RSAVKILEASSDLYSAIVDDKLCMKIGDGSWCPSGPEWKLAASGDRYAVWHKLTAFTG PGNLPWEGGLRFLPSEDAD</aaseq>|
| |
| − | DNA = <dnaseqindica>1..99#1894..1933#2090..2127#2461..2587#2673..2899#3021..3166#3268..3386#3813..3901#3983..4105#4225..4260#4566..4664#4744..4931#5292..5370#atggccatggatgggttcaaggatggatgccattgttgccggtggcagtggctgagtggccctagagcgagcagccgggacgccattgctggccagtgggtatagctttggtcagcttccggaaaaaaaggtgcaaaagctgtgcatgcatgcgtgctgccattggtccggccgagatctcctggctccatcttttgctgctactgtgttgactgaacaagttacaagtgaacagtgcctcttgtccaggattgcaatatctttagcttctctcaactcactttccctttctgaaagcttcacggtctcctaaacggataaaacacacacgcatttggagaagtttggcatgaggctgctgtttgctgtccaaattccaatgctgttaaataaaccataaaaatggaaaaagaatagaaacgaaaaagagaagttgtcagtaagaaactactagcgcaagcatgtttgcaactgatggaccatgacaaacctggcacccataggaaggtaaaccaggcccaattcgctgaggttaacgaaggtatatgagtatatccatgcaaggaaaaagctacacgtaccaaaaaaaaagttacaaacttcttattaatgctgatgtggcatattaagattgaatctagcttttctataacttccaactagaatcaaatggttgagagctttgttagtagtaagaattttgtaggagtattgtggatgttgccattggcattcggcaactgcactactatctttctctttactttctgctttattttctccttcacttcacctttccgaaagcttcaaggcttaggttaaaaagcgcacacaaacaatcacaaattcgaagtttagaacacttgaagccatgaaggtcacctgtcgctgtcgaacgccattgatacaaggaagattaacggaaaaccagtaaaggagcaaggaggagaccatgagtgttcctgtggtatacgtttagggtccttttcaattttctgttcattgaaaattatgaattggatttacaagggttgattgggaaattgtgagctggagtagttcgcattgtgtgtttcacacactgaagttcaagcggtctgacttgaaccgatttgtagcacaaaaaaaaaccgaattttgtgatggatgcacaatggaaaaaggcccatataaactactgtgggccggcatctggcccgtattgtcacggcccatttcctctctggtggtctctctcgtcgttcccgagagaacaaattccagaaatctccatgggcgattgcaggagaagaagctgagcaattcgattccttcctcccactcccactccacgcaggctccgcagccaagatcaaggcaacgaccgggaagaacaaattctcgcctgaagaaacgagaggaagcagcaaatcgccgccgattcgctcgtcggaatccccaccatccaatccaccggcggcggggggccctcaccctaggggagggggtgggtagcgcggctggtggccggaaccctatcctatccgatcggcgtgggcgagaccacctcctctttttgccgccacgcgcgcggggcggcggccgtctggttttgcggggcggatgccggtgggcgcgcgcgcccactggtctggcaggcatcggcggcgcctcgctccgcgtgccctcgcgctcccggcggcggcggcggccgttcagctacttatgtagccgcttgctactagggcgctttcgtcgctcgcgtcgtcgcgcgttggctttggttgtgtggttttgaatgggccagatggtgagttcggcggagtgggtttcctgagatcatattgtgtgtgctgttctttactgatgagtttgagctttgttctgatttccctgaaatgacaaacggtgcaggtttcggatgaaaattttgaagagcaggccgctcgtaatggtaaatacgcagggctcacatctttacctaccaattctcagttgcctagttcctcgtttctacttacaaagttacaaagttgcaccctactatttcagtcgattatctgaatatctgatagaaatgtggttttctaatgtggcatttcctcgacaggtggaattatcaagcacggaagggaaatcctgttccaggtgaaaatctgtctaggcacaccttttgctttcatgctatggatcaaatttgccggagctgacaaattagattgtggaatcaccatatatgtgttctgcaagcacagaaggaaaccacatacatactagtagtttgtcaactgacttgtgcaattattgcggagttgttatttatgtattgtcataactcataatccaggtggagtttggtaaggcttgtttatcttctggtcttgttctgtagatcattggactacctgactaatgccttccctaacccaaaaaaggaatgaacaattctgattatgttgttattttcgctcactctgtcaggcttttaactgggaatcccataagcacaactggtggagcaatttggaggaaaaagttgttgacctagcacaatcggggtttacatcagcgtggctgcctccaccaacacagtcattatctccagaaggtaagctagtcaacaatgtattgtgtcactcgtagctagttacagaaacaagtggtctgaatatctggtccctttattctgacaggctatctgccgcagaacctgtactgcctcgactcttgttatggttccctccatgacctacaagcattgcttcggaaaatgaaagaacacaatgtaagagctatggcagatgttgttattaaccatcgagttgggactactcaaggatcgaatgggatgtataatcgttatgatggtatcccagtatcatgggatgaacatgctgttacatcttgttctggtggaaaggtaatcgacttgtttttatgcaatgtaatcctattgttctcagcctcataattgcatcgtatcttaatggccatgttttgttaataaactattatcaatgtctctacaactttattaccagggcaacgaaagtaccggtgataacttcgatggggttcccaacatagaccatacacagccatttgtacggaaggatattattgactggttgatctggcttcgagaaagcattggttttcaagatttccgctttgatttcacgaaagggtaaatagtcaactcgataggttaacatcatctgtgataggggacctccaaattgctttgttaaaacatgctgatcagccacaattttctgtttagtgcagttatgcagcgaagtttgtgaaagaatacattgagcaatcaaagcctctttttgcggtgggggaatactgggatagctgtgaatatagcccccctgattaccgtttgaactacaatcagggtaagagatttgtaatgacattgctactgattgcttatgccatagtgatgctgtatctagcctaagcgtatgttccttgattgacaactgtgaacactagcatgctgattttttttacttctgtaatttacagtactgcccgtgtgaagttttgtgatttttgaattattaaccactgtcatggtttcctcttttgttgctttctactccttgtgctattgtcgagatgaagcaagggacttagatatcttttgtgaatgcatgacagttacattagattgagtctgtgtagttagcatatggtttagaccatatacaaatttcgaaacagttttctcaaccatgaaaaatgctccttgctttactttgatatggacatttggcgtatattttttttccataaactgaacaattattttttagcagataaacacaggcagagaattatcaattggatggatagcactggaggactttgtgctgcatttgatttcacaacaaagggtattcttcaggttagaaatagaaaattgttctattccttttttggggtaaatgtctacaggttagtttgatcagtttactgttgttttcaggaagctgtcaaaggtgagttgtggcgtttgcgtgaccctgaaggaaagccgcctggtgtcatgggctggtggccttcgagatcagtcacatttgttgaaaatcatgacacaggatccactcaggtataacaattactttatcttccttctatgctcaagataagcttaaccgtgctaatatttgcttggaaatggtgaagatgggctagcaaacagaactaattaaattctcatgattgcagggtcattggccattcccatctgatcatatcatggaggtatgttgtaagaattttgattgcttcatttatgacttgtaccctgcgattgaattacaaaactaattaccattacgatgatgactatgttcttataaaggttgatgtacattgtaacggccatggcaacatagaacagcccctataaaaacaacttgatgtcaataggaaaagcttttaactcagttcgttaatcttggagatatgcgcttatattgatactggaatatatatattttatgatcaggcattcttggcctcattcttttgtgttcgaacatgttgataaacatatggtatctcagggatatgcttatatacttactcatcctggcatccccacggtgttctacgatcatttctatggcaaagatgattccttccatggtggaattgcaaaactggtattgtcctgaatccttagtgctcaattgcatatctttggcagctgccagcactaagtttcaaatgttctgtactcagatggagatcaggaaatgccaggacatacatagccgctccgcagtcaaaatcttggaggccagctcagatctgtactctgcaatcgttgacgataagttgtgcatgaagatcggggacggctcctggtgcccgagcggcccagagtggaagctggcggcctctggtgacagatatgctgtttggcacaagtagatataccaacatatagcatttctttctgctgaacatgagatatgctatttcttcagagcccgaactgtatatgctagtaccatggtaatttaatcatcttcaatgcaataccagagagcaaaccacttgcaatttatcacatgctcacagcagatagtgtaaactgtaatgcgaagtgtaaactgtaatgtgaatacgtatactgtaatgcttgtgtgcatataggaataagagagtgtttatttatagaaagcattcttggaggttgaattctctttctttttgaacttcttgcatgtgccttttttatcatctgcatatatttgagtgcctttgcagaatttcatcatctgcaggctgaccgccttcactggacctggaaatcttccatgggaaggaggactccgcttccttccatcagaagacgcagattaa</dnaseqindica>|
| |
| − | Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001059232.1 RefSeq:Os04g0403300]|
| |
| − | }}
| |
| − | [[Category:Genes]] | |
| − | [[Category:Japonica mRNA]]
| |
| − | [[Category:Oryza Sativa Japonica Group]] | |
| − | [[Category:Japonica Genes]] | |
| − | [[Category:Japonica Chromosome 4]]
| |
| − | [[Category:Chromosome 4]]
| |
Please input one-sentence summary here.
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information