Difference between revisions of "Os05g0181000"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os05g0181000| Description = Heat shock protein Hsp70 family protein| Version = NM_001061347.1 GI:115462424 GeneID:4337984| Length = 5967 bp| De...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os05g0181000|
 
GeneName = Os05g0181000|

Revision as of 20:05, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os05g0181000

Description

Heat shock protein Hsp70 family protein

Version

NM_001061347.1 GI:115462424 GeneID:4337984

Length

5967 bp

Definition

Oryza sativa Japonica Group Os05g0181000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:4858346..4864312

Sequence Coding Region

4858528..4859697,4860554..4860763,4860871..4860966,4861052..4861270,4861643..4861837
,4861908..4862054,4862154..4862303,4863457..4863587,4863676..4863919

Expression

GEO Profiles:Os05g0181000

Genome Context

<gbrowseImage1> name=NC_008398:4858346..4864312 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:4858346..4864312 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagcgtggtggggttcgacgtcggcaatgagagcggcatcgtcgccgtggcgcggcagcggggcatcgacgtggtgctcaacgaggagtcgaagcgggagacccccgccgtcgtctgcttcggcgacaagcagcgcttcatcggcaccgcgggggccgcgtcctccaccatgaaccctaggaactccgtctcccagatcaagcgcctcctcggccgcgccttcgccgacccggagctgcagcgcgacctcgcctccttcccgttccgcgtctccgagggccccgacggcttcccgctcgtccacgcaaggtaccttggggaggacagggcgttcacccccacgcagctgctcgccatggtgctctccaacctcaaggggatcgccgagggcaatctcaacgccgcggtcttcgattgctgcattggcatcccggcgtatttcactgatctgcagcgaagggctgtcgccgatgccgccgccatcgcgggcctccgcccgctgcgcctgttccatgagacgaccgccacggcgctggcttatggaatttacaagaccgatctcccggagaaggagtggttgaatgtggcgttcatcgatgtcgggcatgctagcatgcaggttagcatcgtcgggtacaagaaagggcagctcaacatgctctcgcatgcgtatgaccggtcccttggcgggagagactttgatgaggttctattcaagcactttgcggagaaatttaaggacgagtacaaaatagacgtctaccagaatgcccgtgcgtgcgttaggctgcgtgtggcgtgtgaaaagctcaagaagatgctgagtgccaatccagaggcaccactgaacattgagtgcttgatggatgagaaggatgtgcggggatttataaaacgggaggagttcgaacagatcagttccccagtgctacaacgtgtgaaggctccattggaaaaggccttggctgaagctggcttaacaacagaaaatgtgcactttgttgaggttgttggatcgggctctcgtgttcctgcaataatcaggataatcactgaattttttggaaaggaaccgaggaggactatgaatgcaagtgaatgtgttgcccggggatgcgctcttcagtgtgctgttcttagccccactttcaaagtccgggaatttgaggtcaatgatgggttcccgttttcaattgctttgtcatgcaaaccggattctgagaacactgaatccgaacagactatcgtgttcccaaaaggaagtccagtccctagtgccaaaactgtgaccttctataggtccaatacatttgcagtagacgttgtgagtgtcgatgcagatgatttgcaaatggctaaaaaaatcagctcctatacaattggccctttccaatccagcaaacctgagaaggcaaaagtgaatgtgaaagcatgtctcaacatccatgggatagtctctattgaatcagcaatgatgctggaggaggaagtggatgttccggtagcaactacaaatgagacactaaaggatgatactaaaatggatacagatgatgcactaggtgaccctgcttctggaactgatgagaacatgcaggaatccaaatgttctgcagatgccactcatggtgctgcagaaaatgggaagccagattctgaggaaatatctgctccaatggatactgatgccaaggttgagccattgataaagaatgtgaagaaaattgatgttccagtttctggattggtttatggtgcactggggtctgaagaattggtgaaagcttctgagaatgagtatgaaatggctcttcaggacagagtaatggaagaaaccaaggagaaaaagaatgctgtcgaggcttatgtttatgacatgcgtaacaagctctatgacaagtacaacgattttgtcatgtctgagtacaaggaagggtttattgccaagcttcaggaggttgaggattggctgtacgaagatggtgaagatgagacaaaaggggtttatattgcaaagctggaagaacttaaaaaggttggtgatcctattgagatccgctacaaagagtgggctgaaagaagctcttctattaaccagctggtacattgcatcaacggttttaaagaggttgcattgtctaatagccaagcatttgatcacatcgacatgtcagaaaaacagaaggtcctggatgagtgttcggaggccgagatctggctaatagagaaacagcagcagcaggatgctctaccaaagcatgctgatcctgtcctcttaatatctgacatgaagaagaaagctgaagcacttgacaggtcgtgcagaccgattatgtcaaagccgaaacctgcaccgaagccacagacccctcctccgcctacgcctccgactgaaagcccaacaacgcctgagcctcaaactccagagcagcagcagcaatccaacggtgccggtgaagctgaagagccgacaagcgagggaggtgcccaggatcaggagcctactgccgagcaaatggacacagacaaacctgacggttgggccgaaccatcggcataa</cdnaseq>

Protein Sequence

<aaseq>MSVVGFDVGNESGIVAVARQRGIDVVLNEESKRETPAVVCFGDK QRFIGTAGAASSTMNPRNSVSQIKRLLGRAFADPELQRDLASFPFRVSEGPDGFPLVH ARYLGEDRAFTPTQLLAMVLSNLKGIAEGNLNAAVFDCCIGIPAYFTDLQRRAVADAA AIAGLRPLRLFHETTATALAYGIYKTDLPEKEWLNVAFIDVGHASMQVSIVGYKKGQL NMLSHAYDRSLGGRDFDEVLFKHFAEKFKDEYKIDVYQNARACVRLRVACEKLKKMLS ANPEAPLNIECLMDEKDVRGFIKREEFEQISSPVLQRVKAPLEKALAEAGLTTENVHF VEVVGSGSRVPAIIRIITEFFGKEPRRTMNASECVARGCALQCAVLSPTFKVREFEVN DGFPFSIALSCKPDSENTESEQTIVFPKGSPVPSAKTVTFYRSNTFAVDVVSVDADDL QMAKKISSYTIGPFQSSKPEKAKVNVKACLNIHGIVSIESAMMLEEEVDVPVATTNET LKDDTKMDTDDALGDPASGTDENMQESKCSADATHGAAENGKPDSEEISAPMDTDAKV EPLIKNVKKIDVPVSGLVYGALGSEELVKASENEYEMALQDRVMEETKEKKNAVEAYV YDMRNKLYDKYNDFVMSEYKEGFIAKLQEVEDWLYEDGEDETKGVYIAKLEELKKVGD PIEIRYKEWAERSSSINQLVHCINGFKEVALSNSQAFDHIDMSEKQKVLDECSEAEIW LIEKQQQQDALPKHADPVLLISDMKKKAEALDRSCRPIMSKPKPAPKPQTPPPPTPPT ESPTTPEPQTPEQQQQSNGAGEAEEPTSEGGAQDQEPTAEQMDTDKPDGWAEPSA</aaseq>

Gene Sequence

<dnaseqindica>183..1352#2209..2418#2526..2621#2707..2925#3298..3492#3563..3709#3809..3958#5112..5242#5331..5574#cttcttctgcttgccccgccgccttcctcgcgacccccccccctctcctctcgccgccgccgcgtccgctccacccggcggcggagtactctccatccgccgccgccgcttggtactagatttgtgctggtagccgcgtagatctaactagagagagagagagaagggagtgagtggcgaggatgagcgtggtggggttcgacgtcggcaatgagagcggcatcgtcgccgtggcgcggcagcggggcatcgacgtggtgctcaacgaggagtcgaagcgggagacccccgccgtcgtctgcttcggcgacaagcagcgcttcatcggcaccgcgggggccgcgtcctccaccatgaaccctaggaactccgtctcccagatcaagcgcctcctcggccgcgccttcgccgacccggagctgcagcgcgacctcgcctccttcccgttccgcgtctccgagggccccgacggcttcccgctcgtccacgcaaggtaccttggggaggacagggcgttcacccccacgcagctgctcgccatggtgctctccaacctcaaggggatcgccgagggcaatctcaacgccgcggtcttcgattgctgcattggcatcccggcgtatttcactgatctgcagcgaagggctgtcgccgatgccgccgccatcgcgggcctccgcccgctgcgcctgttccatgagacgaccgccacggcgctggcttatggaatttacaagaccgatctcccggagaaggagtggttgaatgtggcgttcatcgatgtcgggcatgctagcatgcaggttagcatcgtcgggtacaagaaagggcagctcaacatgctctcgcatgcgtatgaccggtcccttggcgggagagactttgatgaggttctattcaagcactttgcggagaaatttaaggacgagtacaaaatagacgtctaccagaatgcccgtgcgtgcgttaggctgcgtgtggcgtgtgaaaagctcaagaagatgctgagtgccaatccagaggcaccactgaacattgagtgcttgatggatgagaaggatgtgcggggatttataaaacgggaggagttcgaacagatcagttccccagtgctacaacgtgtgaaggctccattggaaaaggccttggctgaagctggcttaacaacagaaaatgtgcactttgttgaggttgttggatcgggctctcgtgttcctgcaataatcaggataatcactgaattttttggaaaggaaccgaggaggactatgaatgcaagtgaatgtgttgcccggggatgcgctcttcagtgtgctgttcttagccccactttcaaagtccgggaatttgaggtactgatttatctatttaagtttctgttgacgtttgtttctgccgtagtgtatctattttgtctgattctaatgttcttgattatgtaacgtaaactagagaaagctgctggttatttgtcccacatgcgtcggtttttggaagcattccatgcttcattattatatttctacaaataaatagtaaatgtgccactagaagattttaatagcagaatgggtatctcagtattttttttaactagaatgtctttcaattactatatgtgcccacatatttatgccatgtaatcaatgaatgcttatctctttacattttccgttttgaccatctgatgtcgttgcctacttttagagtctaatttgtcatccatatggttttatttcctctgggcctccctctgctaagttaatatgagctcatggcatgtattaatccgaattaattatattattgctattcaggcagtggtactatgtctttggattatgtgtatcagtacactatactttggatttggtgttttacacactgtccacttgtaacattacatgaagcaaggagtgcggaatggtgtattgcttttattatatgacagaatggcagaataaaaatggtacatatagaatatatatttccactaagacattgtttgtgatgctagtagagatggcttaatgtcaaatggactggaaattatctgtagtggccgattgtacatttacaccaactaatttcatagtcatgcctggcagacgtgctatttttatctgtgagagaatgcttaagagattggatgatatcttcttttattgtccctgtgcaaatagttaacctatgcttgatattttgcaggtcaatgatgggttcccgttttcaattgctttgtcatgcaaaccggattctgagaacactgaatccgaacagactatcgtgttcccaaaaggaagtccagtccctagtgccaaaactgtgaccttctataggtccaatacatttgcagtagacgttgtgagtgtcgatgcagatgatttgcaaatggctaaaaaaatcagctcctatacagtaagcaacattgcaaactttcgccagtattcaaacctgatgttatttgtggttcttaactggttcaacagttgctgatttgctatgctgtgattgaccgtatgcagattggccctttccaatccagcaaacctgagaaggcaaaagtgaatgtgaaagcatgtctcaacatccatgggatagtctctattgaatcagcaatggtaagttaaaaggaatcccatcatcttctcgagtagcacgcaatgtctttctgatctttgtgggctttggttcttttgtatgcagatgctggaggaggaagtggatgttccggtagcaactacaaatgagacactaaaggatgatactaaaatggatacagatgatgcactaggtgaccctgcttctggaactgatgagaacatgcaggaatccaaatgttctgcagatgccactcatggtgctgcagaaaatgggaagccagattctgaggaaatatctgctccaatggatactgatgccaaggtatggatctactgttgggtgctggcacacttcagctttagtgtatgtatgtagttggcatatctgttgcagtatgttttcaaataacgatgttctatattgtcttaatttggtggtttcctatcgccatgaatggaattccctcgtcatggtagtgtgttcagagcatttgataatctccttttgagttttagatactgtgctgattcatagctttgtaagtgctatcttgtgaagtgaagcacaacgaatataatttagttacttataacataggaacttcatgcaagttgtgatctatcttgtttatgcaaatgagagctgcccatctttttatgagacatattttctgaaatggtttttcttttttaggttgagccattgataaagaatgtgaagaaaattgatgttccagtttctggattggtttatggtgcactggggtctgaagaattggtgaaagcttctgagaatgagtatgaaatggctcttcaggacagagtaatggaagaaaccaaggagaaaaagaatgctgtcgaggcttatgtttatgacatgcgtaacaaggtatgccgagtttaattttgtgatgatatatgaacatttgaacagtacctgatgagtttcttgcgttcagctctatgacaagtacaacgattttgtcatgtctgagtacaaggaagggtttattgccaagcttcaggaggttgaggattggctgtacgaagatggtgaagatgagacaaaaggggtttatattgcaaagctggaagaacttaaaaaggtacctcttttattgcacttcttggtttacattgtgtctttatgtgttggtttggtttgttcttggacattgagttttgatatgcctgaacttttttaggttggtgatcctattgagatccgctacaaagagtgggctgaaagaagctcttctattaaccagctggtacattgcatcaacggttttaaagaggttgcattgtctaatagccaagcatttgatcacatcgacatgtcagaaaaacagaaggtatgtattcatagagatggataattttctcttgataaggaaattccttgtatgccactcaatgttcctcagttacctaatctgccagatagaaagttgctttcctttaataccatgactttctaagttccaactcttatgtgtcaagtgttaacttcgttaggcttgactgccgttaactctcagcaagttgtctggtttttgtcaaataccaatcttactgtcgcaaatctatggccgaggtgccattttttattttatcttctctttcttatctatcccctgctctgtggaacatgaaagcagtccacagacactatcgccactaggttgagcactgccagtctgccactagacattatttcgcagatttagctagcataaaacatgtgctgctgttcctttctcgctcatgcaatctaacagctctcatctgctataccttgctcttccacactcgctgggctggggtgttccaaatccaccagtcctcagcagctcctataggaagcacaatttcttctgacaccaaattgaatcaaatacagtagttttgcaccacactgaaggtggccagtaggggagcaagtgtaagaagcagaagaatcatctcagcctctcaggaagagaaggaaggctgacaagttggcccgcacatgtgggacatgccttagggcaaatacgacattttataacctgagaaacataacattaatgggcaggctgaaatgacaaataagggtaacaaaagtttctccaatggtactaaaggaagtgtgatttttacattgacatcaggaagggaggaagttgggagggaagggattggcaagtaggcccagcactttgttggacatgcctcaagggcaaatcatgaccttttttataacccaataaaaatcatgctaatgggagacaggcagaaatggcaaatgagggtagcggaaaattttccatcggcagtaaaggaaacaccatattcgttatatatgtatacaaagcagttctgttacgtcaacattccaagcggatgcttgtctagtcattaaatcctttgttaatatgccttctagttcttgtttttgtgaatggtagtagcaaaggaatattaatgatcgttttcttcagctgctaatcaaaatttctgcatcaggtcctggatgagtgttcggaggccgagatctggctaatagagaaacagcagcagcaggatgctctaccaaagcatgctgatcctgtcctcttaatatctgacatgaagaagaaagctgaagcacttgacaggtttgtgtgtttatttgctataataacacacctgatgttagtttgattcttgtgtctgagtcaactacctctaaaccttgtttcacaggtcgtgcagaccgattatgtcaaagccgaaacctgcaccgaagccacagacccctcctccgcctacgcctccgactgaaagcccaacaacgcctgagcctcaaactccagagcagcagcagcaatccaacggtgccggtgaagctgaagagccgacaagcgagggaggtgcccaggatcaggagcctactgccgagcaaatggacacagacaaacctgacggttgggccgaaccatcggcataagtttgttgtcgacaaactaagaactcctgtgatcgaatgcttcctcatgtggttatggtcacttggttttaggcccgtgaatgagctaggagaaccggatgtttttttggggtgctgtacttggtggtcacttcacttggttgggattgtgacatggacatgttggtaagggtaaaatgctggtggcttgtcccttgaatcactttttttttcttctcttatttaggatggttgaattggggatgagagggcatgccaccacccatttattcaggccttggttcaacacgggtctaaactgtagcttttgtccaatggtccataacatctaaggaaaaacaaattttggtccatgggaagaaacgctctcaatacattttttactggtttccc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0181000, RefSeq:Os05g0181000