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| Line 20: |
Line 20: |
| | | | |
| | ==Structured Information== | | ==Structured Information== |
| − | {{JaponicaGene|
| + | [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 4]] |
| − | GeneName = Os04g0563500|
| |
| − | Description = RNA-directed DNA polymerase (Reverse transcriptase) domain containing protein|
| |
| − | Version = NM_001187113.1 GI:297723356 GeneID:9270638|
| |
| − | Length = 6388 bp|
| |
| − | Definition = Oryza sativa Japonica Group Os04g0563500, complete gene.|
| |
| − | Source = Oryza sativa Japonica Group
| |
| − | | |
| − | ORGANISM Oryza sativa Japonica Group
| |
| − | Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
| |
| − | Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
| |
| − | clade; Ehrhartoideae; Oryzeae; Oryza.
| |
| − | |
| |
| − | Chromosome = [[:category:Japonica Chromosome 4|Chromosome 4]]|
| |
| − | AP = Chromosome 4:28603095..28609482|
| |
| − | CDS = 28603095..28603526,28604427..28604798,28604980..28606887,28607149..28607301,28607851..28608276<br>,28608412..28609482|
| |
| − | GCID = <gbrowseImage1>
| |
| − | name=NC_008397:28603095..28609482
| |
| − | source=RiceChromosome04
| |
| − | preset=GeneLocation
| |
| − | </gbrowseImage1>|
| |
| − | GSID = <gbrowseImage2>
| |
| − | name=NC_008397:28603095..28609482
| |
| − | source=RiceChromosome04
| |
| − | preset=GeneLocation
| |
| − | </gbrowseImage2>|
| |
| − | CDNA = <cdnaseq>atggcaacatggttctaccagaaggcggtgctgtctcgcagtccatccgaacatgccgaccacgctgttatgatcatccatcgtgatatggactgggtttcttttgttaggccaggaggaagcaattggcaggtggcttcaactctggatgttaacgggaaagatcggtatgccgattgcgtgtaccacaatgggggcattctacattgtgacagttctggggatagtggagaaatggatcttgaaggaccgaacggaccaacgaaggaggttattgtttccaaaatgcaatatttacctggacttcttacaaggcacctggtgtctactccgtggggttacctgttgcaagtgcgtgcaatttcgcgaggtcaagtgaagaatggtacgagactccaagttcgcgaggttcatcctgatgggagcaagaaggcgcactctgctcaggccagcagcaaggcggccgcctccgagcgctcgtcggccacgcctcttgtgcgcgcagcttctcctgctcctgcaatctcagcgccatctccaaccaagcccgcgtcagctccagtgaagcctgcttgcgccaagccgatggaggagggcttgggtgccggcgacccgctcctgcgcccgcaaggcggccacggcgtcctttcttggacccccggcatgtcggcgatagagcagcgtctgagggggcgttccctggttgcctcggtgctctcggggagaaaggaggtctcgccggcgacgatggtcgccgcgctgagcggtctctgtggggtcccccctggggatgtctgcgtcgagctggctgtggagggcctcccagcccacgccatggagattgaggctgtcaagcagctcctcaacaagattgattgtcagttcatcgagctgttcgatccagttgatgcgtgtatgttggaggtgttggcctggtcggccgacccgtccaaaatcccgaaggagttcatccttgacatccccgagccgatgcaagaatggtggatgccgcctgcgactgatgatcctgacatgttcgagctgctcgtgtcacagtctcccccggccccgcccacggagaagaagtgtctcaccttcgatctcctcctgcatctcagagaggtggtcgaccccgtccggcagctgccggacagtccgtcctatgaccctttcctcgacgatcgcgaggcccctcgcaggcgcacttacaacgcattcctcggcaggatcgacggctctggcccgggccagctgttgggtggcggccacggtttcgcgggctcgagtgcggggacggcgggtggcctccagcgacagctgctcctcgaggtgggggtgcagcatgcggagccggcgcctgttgtccccctggtgctgcctacgtccgcccagcaggcgccgcctctggtgctgcctgcccccgttcagcattccgtgccgtcggtggacgggctggcggctgcacagcctctagcggcgtcggacattgcacaggacgttccttcccaggcagctgctgtggccgccgttctggggtcacctgacgtccttttggggtcggaggatatctccccgccgctcgcttcgttgagcgtcgggcaggtagctcccccttctccggtcggaggtcggacgccggacgtcgggcaggctgttgcggccgctgttctggggccgtctgacttccttcaggggccgcaattctccccgccgtcactgtccgaaggtgtggggccagcgcctggctgctcggcgccaatctctcaggctgcgaccgcccaagtgcttccgtcggccggaaaccaggcttcgacctccgccatgggtgctacgtccgtgcacacgtctccaggtgaggcggtgatcaccatgcagctagttggggtggggccaggctcattaaccagccctgcttcagcaccagcgcgtctgggtgtgaccccacctgtaagtgagctgaggcagaaggggcttgccaggcagctatcttttgatgcgcccgcccaagatttgccgtgctcagcggcattaatgtcgccacaacctccccaggctacggcgccggttgatgaggatgaacgcgcgaatacgggtttcaactcccctggggcacgagaattggcgcctctgtgtgagggggcgtcgcaaggcattttaggccttgggccctggcccgaggtgcacatctccagcccagctctggtgtactgtcgtcgccacctccgtccgactacgggccgcaagtggcctactcgtcgggctgcttctgggagcccgccgcttgccacgcaggctgtggcttctccggtacagggcgcgttgcaggatgcctcccgccctgttcctgatctgctggcgggggagattgtcacctcgctcggtgatctgatggtgcccctgccaggcgcgatcctcggcaagtttccacccccgacgccggtgcgcaggtcgcggcggatggagccgtacacacaaactcctaggcgtagtgagaggctggctgccatgaacggtgggcgtcaccagcactcggcctcgaaggcgcagcgtgtgctcatgaagaaactcggcgtggttgacgatgagaacaaggtggaagaaacagatatcctcaagtacctggagctctttaagacgccgctggtgccgtcccacatccaggccttggctgcgctctgctgcgtcaaggtgtcagcttcacagggagtggagaggtggtctgttcatttcttggcgcgccgatcgttttgctgtgagctgcctgcacaagggaacttggtcactcacgctgagtgtgaccaacttggaaggggggctgtgtggacattgactaatgtctatgggccgcaagcacctgagcaaaagctcgctgtggcacatgaagtgattcttcagttggacagggcaatggattctcgccagttgtccccggaggagcgctccctccgtgcgatactcaaggggaggtgcctcgcactcgcctcgctcgagcgcatccgtctgcgacagcgggcacgtctgcggtacctaaagcatagcgggacggcctcccaattcttccacttgaagatcaatgcacgacgtagaaagaagacaatccctatgattcagcacggtggagtttggggtgtaacacaggaagacaagctggatatggcccatgactacttctgcagcatcatgggttcaccgtcgcctccgtctgcggctcttgatctaggccgcctgggtctgccctctctcgatttattggagctcgaggtggagatcacagaagatgaagcaaagaagcatcttcatctcctgaacactgcatccatcatcctactccccaagaaagacgatccgacgcagctggcagactataggcccattagcctcatccacagcttcatcaagctcttcactaaggttctcgctactcgtctggctgctcgcatgaatgaacttgttggccccgctcagtcggcgttcatcaaatccagaagaattcaggaaaacttcttgtatgtgcaaggtgtggtacggaagattcatcgtgcaaaatgccctgctgtcctgcttaagcttgacattgcgaaagctttcgactcggtttcgtgggaattcctgattgagctgcttcgccatctgggtttcgggtccaagtggagagattgcatcgccgtgctgttgggttcctcctctaccacggtctgcatcaacggtcaggacacgcataggatccgcctggccaggggtttgcggcagggtgacccgctgtcgccgctgctcttcgatctggtgatggagaccttcgctgccctgtgtaacaccgctgtgtgtagaggtgccttgagcccgctgaccggtggtgtgcttcccttgcggacttcgctctacgcagatgacgccatcatcttcttccatccctcatccatggatgccgcctctattcgctgtctgctcagcatgatgggtgcggcaaccggtctggtctccaattactcgaagagctccatcactccaattcattgctcccaagagcaaatcgatgaggtggctgacgtgcttggttgcccggttagacaactccccattaaatacctcggtctccctctatcggtgcgcaagccggtcaaagcagacattcaaccattgatggaccgacttggtaagaaccttgccggctggaaaccaaagctcctggggcctgatgcctgccttgccatcatcaagcacatgttgatgaccctccctctctattttatgtctgtgcttgagttaccgtcgtgggcgatcaaggagatcgaacggaagtgtaggggattcctttggaaaggcgatgagaacgcagccgggacttgcagccttgtggcatag</cdnaseq>|
| |
| − | AA = <aaseq>MATWFYQKAVLSRSPSEHADHAVMIIHRDMDWVSFVRPGGSNWQ VASTLDVNGKDRYADCVYHNGGILHCDSSGDSGEMDLEGPNGPTKEVIVSKMQYLPGL LTRHLVSTPWGYLLQVRAISRGQVKNGTRLQVREVHPDGSKKAHSAQASSKAAASERS SATPLVRAASPAPAISAPSPTKPASAPVKPACAKPMEEGLGAGDPLLRPQGGHGVLSW TPGMSAIEQRLRGRSLVASVLSGRKEVSPATMVAALSGLCGVPPGDVCVELAVEGLPA HAMEIEAVKQLLNKIDCQFIELFDPVDACMLEVLAWSADPSKIPKEFILDIPEPMQEW WMPPATDDPDMFELLVSQSPPAPPTEKKCLTFDLLLHLREVVDPVRQLPDSPSYDPFL DDREAPRRRTYNAFLGRIDGSGPGQLLGGGHGFAGSSAGTAGGLQRQLLLEVGVQHAE PAPVVPLVLPTSAQQAPPLVLPAPVQHSVPSVDGLAAAQPLAASDIAQDVPSQAAAVA AVLGSPDVLLGSEDISPPLASLSVGQVAPPSPVGGRTPDVGQAVAAAVLGPSDFLQGP QFSPPSLSEGVGPAPGCSAPISQAATAQVLPSAGNQASTSAMGATSVHTSPGEAVITM QLVGVGPGSLTSPASAPARLGVTPPVSELRQKGLARQLSFDAPAQDLPCSAALMSPQP PQATAPVDEDERANTGFNSPGARELAPLCEGASQGILGLGPWPEVHISSPALVYCRRH LRPTTGRKWPTRRAASGSPPLATQAVASPVQGALQDASRPVPDLLAGEIVTSLGDLMV PLPGAILGKFPPPTPVRRSRRMEPYTQTPRRSERLAAMNGGRHQHSASKAQRVLMKKL GVVDDENKVEETDILKYLELFKTPLVPSHIQALAALCCVKVSASQGVERWSVHFLARR SFCCELPAQGNLVTHAECDQLGRGAVWTLTNVYGPQAPEQKLAVAHEVILQLDRAMDS RQLSPEERSLRAILKGRCLALASLERIRLRQRARLRYLKHSGTASQFFHLKINARRRK KTIPMIQHGGVWGVTQEDKLDMAHDYFCSIMGSPSPPSAALDLGRLGLPSLDLLELEV EITEDEAKKHLHLLNTASIILLPKKDDPTQLADYRPISLIHSFIKLFTKVLATRLAAR MNELVGPAQSAFIKSRRIQENFLYVQGVVRKIHRAKCPAVLLKLDIAKAFDSVSWEFL IELLRHLGFGSKWRDCIAVLLGSSSTTVCINGQDTHRIRLARGLRQGDPLSPLLFDLV METFAALCNTAVCRGALSPLTGGVLPLRTSLYADDAIIFFHPSSMDAASIRCLLSMMG AATGLVSNYSKSSITPIHCSQEQIDEVADVLGCPVRQLPIKYLGLPLSVRKPVKADIQ PLMDRLGKNLAGWKPKLLGPDACLAIIKHMLMTLPLYFMSVLELPSWAIKEIERKCRG FLWKGDENAAGTCSLVA</aaseq>|
| |
| − | DNA = <dnaseqindica>1..432#1333..1704#1886..3793#4055..4207#4757..5182#5318..6388#atggcaacatggttctaccagaaggcggtgctgtctcgcagtccatccgaacatgccgaccacgctgttatgatcatccatcgtgatatggactgggtttcttttgttaggccaggaggaagcaattggcaggtggcttcaactctggatgttaacgggaaagatcggtatgccgattgcgtgtaccacaatgggggcattctacattgtgacagttctggggatagtggagaaatggatcttgaaggaccgaacggaccaacgaaggaggttattgtttccaaaatgcaatatttacctggacttcttacaaggcacctggtgtctactccgtggggttacctgttgcaagtgcgtgcaatttcgcgaggtcaagtgaagaatggtacgagactccaagttcgcgaggttcatcctgatgggagcaagaaggtatcaccaaaatcaaaatcaacaatgccctaaaagaacatgtgatatttctcgggttgaatcactcggcatgtttgcgcaccaagaatttctcggggctaaggcctcgttgcatctatttttctgctcctttgatgagaagcacatgtgatctcctttatatttgtcatggatggggaggcggtaggacctatgacatgtttccccctctgtgtacgtaaaaaggctataacccctttccatccgaggtttggatcacaccaaatatgtaatggaataatctactttaatctcagaaatattgtaatttgtctactttaatcctcttacgcatgaagtcacatattttacttccgaagtactcactccgtttcaaaaagagtgtctttgcagaaaaccaatggcgaaaagatgagagagagtgtgagagcctcgtcgcccacctacccaccacctcgcccggcggccgctcgctccgacggccgtcggccaggaaaagcccccgttgaccctgccccctcctgggctgatgtcgccagggccccgccggcctctcgtccgtccttgtcgcaggaggagctggacgcgggttggcgtgtggtgaagcgcaggagtaaagtcgctcctgctgccggccggacaaccaccgcatttactcccccggagcgacgccctatcccccgttggctccttggcaggtgcttccgttgcctaggtttggaccatcttaaagccgcctgcagcgaacatccaaggtgctaccgttgttggttccctggccacctcgagcgtaactgctacgttgacctcgacgccaccccgccgcggaaggtccctgctgcggcgccggcagcgcccctccgacagccatcttctggtttctctgtgtctgctccctaggcgcactctgctcaggccagcagcaaggcggccgcctccgagcgctcgtcggccacgcctcttgtgcgcgcagcttctcctgctcctgcaatctcagcgccatctccaaccaagcccgcgtcagctccagtgaagcctgcttgcgccaagccgatggaggagggcttgggtgccggcgacccgctcctgcgcccgcaaggcggccacggcgtcctttcttggacccccggcatgtcggcgatagagcagcgtctgagggggcgttccctggttgcctcggtgctctcggggagaaaggaggtctcgccggcgacgatggtcgccgcgctgagcggtctctgtggggtcccccctggggatgtctgcgtcgaggtctccaggccgtcggacttcctcctctcgttccggcgagaagaggactgctcgggcatgctcgcgtggtcggggcgcttcaacgcggggggggggggggggggggggggctctggtttccttcaagcgctggcatcgcgcggtccacgcccgaacctccaagcttcttttcgtcgtcaagctggctgtggagggcctcccagcccacgccatggagattgaggctgtcaagcagctcctcaacaagattgattgtcagttcatcgagctgttcgatccagttgatgcgtgtatgttggaggtgttggcctggtcggccgacccgtccaaaatcccgaaggagttcatccttgacatccccgagccgatgcaagaatggtggatgccgcctgcgactgatgatcctgacatgttcgagctgctcgtgtcacagtctcccccggccccgcccacggagaagaagtgtctcaccttcgatctcctcctgcatctcagagaggtggtcgaccccgtccggcagctgccggacagtccgtcctatgaccctttcctcgacgatcgcgaggcccctcgcaggcgcacttacaacgcattcctcggcaggatcgacggctctggcccgggccagctgttgggtggcggccacggtttcgcgggctcgagtgcggggacggcgggtggcctccagcgacagctgctcctcgaggtgggggtgcagcatgcggagccggcgcctgttgtccccctggtgctgcctacgtccgcccagcaggcgccgcctctggtgctgcctgcccccgttcagcattccgtgccgtcggtggacgggctggcggctgcacagcctctagcggcgtcggacattgcacaggacgttccttcccaggcagctgctgtggccgccgttctggggtcacctgacgtccttttggggtcggaggatatctccccgccgctcgcttcgttgagcgtcgggcaggtagctcccccttctccggtcggaggtcggacgccggacgtcgggcaggctgttgcggccgctgttctggggccgtctgacttccttcaggggccgcaattctccccgccgtcactgtccgaaggtgtggggccagcgcctggctgctcggcgccaatctctcaggctgcgaccgcccaagtgcttccgtcggccggaaaccaggcttcgacctccgccatgggtgctacgtccgtgcacacgtctccaggtgaggcggtgatcaccatgcagctagttggggtggggccaggctcattaaccagccctgcttcagcaccagcgcgtctgggtgtgaccccacctgtaagtgagctgaggcagaaggggcttgccaggcagctatcttttgatgcgcccgcccaagatttgccgtgctcagcggcattaatgtcgccacaacctccccaggctacggcgccggttgatgaggatgaacgcgcgaatacgggtttcaactcccctggggcacgagaattggcgcctctgtgtgagggggcgtcgcaaggcattttaggccttgggccctggcccgaggtgcacatctccagcccagctctggtgtactgtcgtcgccacctccgtccgactacgggccgcaagtggcctactcgtcgggctgcttctgggagcccgccgcttgccacgcaggctgtggcttctccggtacagggcgcgttgcaggatgcctcccgccctgttcctgatctgctggcgggggagattgtcacctcgctcggtgatctgatggtgcccctgccaggcgcgatcctcggcaagtttccacccccgacgccggtgcgcaggtcgcggcggatggagccgtacacacaaactcctaggcgtagtgagaggctggctgccatgaacggtgggcgtcaccagcactcggcctcgaaggcgcagcgtgtgctcatgaagaaactcggcgtggttgacgatgagaacaaggtggaagaaacagatatcctcaagtacctggagctctttaagacgccgctggtgccgtcccacatccaggccttggctgcgctctgctgcgtcaaggtgtcagcttcacagggagtggaggtcttctgatgtcgcgcctgttccttaattgttgtagcctcttcctctgtttctaatgtcttgctctctgttagtttggaatgtaagggggctgaataaccccagtaagaggtctctcgtagcaggggtggtgagatcgtctggtgcttccattttctgttgtcaagagtcgaagttggctgcgctggataggcagcttgtagtgcaatcttgtggctctttgttggataattttgagttcatcccgtctgatggttccagaggtggtctgttcatttcttggcgcgccgatcgttttgctgtgagctgcctgcacaagggaacttggtcactcacgctgagtgtgaccaacttggaaggggggctgtgtggacattgactaatgtctatgggccgcaagcacctgagcaaaaggtgcagttccttaatgaactgacgaccgtgggtcagcatcatgtccagggagcatggtgcatcgtgggggattttaatctcctggcggcggaatcagataagaacaaccagaatgttgacagacgcatgatcaaccggttcagatgtttgctgaacctgctggagctcagggagctttatctgttcggccgtcgcttcacttggagcagcgaacaagagtcaccgactcttaccaagatcgacaaagtcctggtgaatgcggagtgggaggactttttccgggatgcgcacctgcaagctctcagctcgtcggcttcggatcattgtcctcttcttttggcttgtgatgcaatggtccacaggccgcgaagattcaaatttgaggcgttctggctgcacctggatggtttcgacgagattgttcgggctgcctgggaatcggccccggcaggctcaaatgccttcagttctcttcactttaagctcaaggctacggcgacggcacttaaaccatggggagcacatcgcatttgtgagctgcgcttgcagctcgctgtggcacatgaagtgattcttcagttggacagggcaatggattctcgccagttgtccccggaggagcgctccctccgtgcgatactcaaggggaggtgcctcgcactcgcctcgctcgagcgcatccgtctgcgacagcgggcacgtctgcggtacctaaagcatagcgggacggcctcccaattcttccacttgaagatcaatgcacgacgtagaaagaagacaatccctatgattcagcacggtggagtttggggtgtaacacaggaagacaagctggatatggcccatgactacttctgcagcatcatgggttcaccgtcgcctccgtctgcggctcttgatctaggccgcctgggtctgccctctctcgatttattggagctcgaggtggagatcacagaagatgaagcaaagaaggtgatgttagagatgcccgtggacagggctccgggaccggacggtttcggcgcagccttctatagaagatgctagaatattgtgaaggatgatgtggtagcagccctcaacctagtgttcaacgctaattcgcagcatcttcatctcctgaacactgcatccatcatcctactccccaagaaagacgatccgacgcagctggcagactataggcccattagcctcatccacagcttcatcaagctcttcactaaggttctcgctactcgtctggctgctcgcatgaatgaacttgttggccccgctcagtcggcgttcatcaaatccagaagaattcaggaaaacttcttgtatgtgcaaggtgtggtacggaagattcatcgtgcaaaatgccctgctgtcctgcttaagcttgacattgcgaaagctttcgactcggtttcgtgggaattcctgattgagctgcttcgccatctgggtttcgggtccaagtggagagattgcatcgccgtgctgttgggttcctcctctaccacggtctgcatcaacggtcaggacacgcataggatccgcctggccaggggtttgcggcagggtgacccgctgtcgccgctgctcttcgatctggtgatggagaccttcgctgccctgtgtaacaccgctgtgtgtagaggtgccttgagcccgctgaccggtggtgtgcttcccttgcggacttcgctctacgcagatgacgccatcatcttcttccatccctcatccatggatgccgcctctattcgctgtctgctcagcatgatgggtgcggcaaccggtctggtctccaattactcgaagagctccatcactccaattcattgctcccaagagcaaatcgatgaggtggctgacgtgcttggttgcccggttagacaactccccattaaatacctcggtctccctctatcggtgcgcaagccggtcaaagcagacattcaaccattgatggaccgacttggtaagaaccttgccggctggaaaccaaagctcctggggcctgatgcctgccttgccatcatcaagcacatgttgatgaccctccctctctattttatgtctgtgcttgagttaccgtcgtgggcgatcaaggagatcgaacggaagtgtaggggattcctttggaaaggcgatgagaacgcagccgggacttgcagccttgtggcatag</dnaseqindica>|
| |
| − | Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001187113.1 RefSeq:Os04g0563500]|
| |
| − | }}
| |
| − | [[Category:Genes]] | |
| − | [[Category:Japonica mRNA]]
| |
| − | [[Category:Oryza Sativa Japonica Group]] | |
| − | [[Category:Japonica Genes]] | |
| − | [[Category:Japonica Chromosome 4]]
| |
| − | [[Category:Chromosome 4]]
| |
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Annotated Information
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Structured Information
