Difference between revisions of "Os05g0209400"

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(Created page with "{{JaponicaGene| GeneName = Os05g0209400| Description = Similar to Nudix hydrolase 15, mitochondrial precursor (EC 3.6.1.-) (AtNUDT15)| Version = NM_001061445.1 GI:115462620...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os05g0209400|
 
GeneName = Os05g0209400|

Revision as of 20:06, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os05g0209400

Description

Similar to Nudix hydrolase 15, mitochondrial precursor (EC 3.6.1.-) (AtNUDT15)

Version

NM_001061445.1 GI:115462620 GeneID:4338090

Length

2479 bp

Definition

Oryza sativa Japonica Group Os05g0209400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:6748554..6751032

Sequence Coding Region

6748641..6748929,6749026..6749168,6750410..6750529,6750641..6750865

Expression

GEO Profiles:Os05g0209400

Genome Context

<gbrowseImage1> name=NC_008398:6748554..6751032 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:6748554..6751032 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaggcctctcctcgcccgcctcttcgccccgacttacattgccatgggtttctcctcctccgcgtcgccgccgtcccggcggcttgcccacctcacacgccacctcctcctcagctccggcgagctctcctcctcggtgggcgcccccgccgccgccgcccggccggcctacctcgccgcccccaagggctacgccgccgtgctggtctgcctcttcgaggacccccacggcggcgacccccgcgtcatcctcaccaagcgcgccgcctccctctcctcccactccggggaggtgtcgctgccgggagggaaggtggaggagggggatgcggatgcgacggcgacggctctgcgggaggcgaaggaggagattgggttggaccctgcgcttgtttctattgtcacagttcttgagcccttcttgtccaagaacggactccatgtaactcctgtaatcggcattctttcggataaagctttattcaagcctgtcttgaatgaatctgaagtggcagacatctttgatgcacctctagagatgttcctgaaggatgataaccggaaaacacaagaatcgaattggatgggcatgaatattccagtccagtcttttgagtaccagtcagaggacaaaacgtttgtgatttggggcttaacggcacacattctgactcgtgctgcagcagtcgttttaccgagagaaccatcatttgttgaatttcgaccaagatatgtgaactcaccctctggagatacgaatgaaacaaaacgctga</cdnaseq>

Protein Sequence

<aaseq>MRPLLARLFAPTYIAMGFSSSASPPSRRLAHLTRHLLLSSGELS SSVGAPAAAARPAYLAAPKGYAAVLVCLFEDPHGGDPRVILTKRAASLSSHSGEVSLP GGKVEEGDADATATALREAKEEIGLDPALVSIVTVLEPFLSKNGLHVTPVIGILSDKA LFKPVLNESEVADIFDAPLEMFLKDDNRKTQESNWMGMNIPVQSFEYQSEDKTFVIWG LTAHILTRAAAVVLPREPSFVEFRPRYVNSPSGDTNETKR</aaseq>

Gene Sequence

<dnaseqindica>88..376#473..615#1857..1976#2088..2312#aaaaatcctgtgggggaacctcgccggcgatccctccaaagcccagaagcgacgccgccgccgccgccgccagccgccacgttatccatgaggcctctcctcgcccgcctcttcgccccgacttacattgccatgggtttctcctcctccgcgtcgccgccgtcccggcggcttgcccacctcacacgccacctcctcctcagctccggcgagctctcctcctcggtgggcgcccccgccgccgccgcccggccggcctacctcgccgcccccaagggctacgccgccgtgctggtctgcctcttcgaggacccccacggcggcgacccccgcgtcatcctcaccaagcgcgccgcctccctctcctcccactccggtctatatgagcacccaaagctgggatccttttttgaagaattttcttgctaaatatctcattggatttgttcaatttattgtggaaaattgataggggaggtgtcgctgccgggagggaaggtggaggagggggatgcggatgcgacggcgacggctctgcgggaggcgaaggaggagattgggttggaccctgcgcttgtttctattgtcacagttcttgagcccttcttgtccaaggtaaacccatttttttttcaagtactcttggcatggttgcgaaatctaggtaatgttaggttatagcttttacctatgaattttagtggtttgaatgtgcttttgttacattgcctgtgtgggatggaagtgaaaccatcgtcgatacaaagaggatcggtagttagtcgatctagtgtaaatcctactgaattgcaggaagtggcagtagctgtgctgccagagcagcagctatatagtgcatgttgcaggtcaaattctgttatagtattgagttgatatgagatatttgtaatattttagcttttgagccccagtcttaatatgctgaatggtttatgtgtactgcatctgcatgcctcagattgttcagagaaacagaaagtgtgaagcattagcgaatgagtcaatcacagaagtcatgtgattttttttaccttgttcttagcatgtgttagatagtgctaataaaagtagaaaccaatatgatgatcgatggattttgattcattcagagacaataattcaataaagagataatgaaaatatgcttgctagttcatttgatctctgtttgccattttatcgcttgtttgtgtattgctgatatgccaatgccatatcacatttctagtcccaaggcgttatataactgacttgtgagaatataagtttacgtgcatggccaactgcgaatgtcttggttttcaactaataacaaccaaaagttcttgcatactttggtgcttcatctggttattgctgttttcttgacaaataatactctaaataactactcaaacacatgtgtccatccaagttcatctaaattaccttttttagtcacctgagcttggtacaacttgtcatctcttccccaagaacaggtgctctttcactctagtaaagtcaggccacttacctgtttcttacactaaattattatggttgctatctgatataagctgtgtgagtttttggaaccctgcctttgtgcatcaaatttccctttgtaatatcaagtaatctataactgtagtcccatgctcagaccccaccgttttctgtccttagaggagagatttccaattaacatctcactcttatattaaaatactgataaaactatttgctctatatggctttaattgagtaattattgatttccaagataacacattctttgacacattcaatagaaatgcaaactatccagaactcatagtacagtcattttgtagaacggactccatgtaactcctgtaatcggcattctttcggataaagctttattcaagcctgtcttgaatgaatctgaagtggcagacatctttgatgcacctctagagatgttcctgaaggtattactgttatttatcgatgttactcttctccttttatattcatcatcaacttcttgttgtcgacaagggcattgttgcatctagctctcatttctaccatacctttaggatgataaccggaaaacacaagaatcgaattggatgggcatgaatattccagtccagtcttttgagtaccagtcagaggacaaaacgtttgtgatttggggcttaacggcacacattctgactcgtgctgcagcagtcgttttaccgagagaaccatcatttgttgaatttcgaccaagatatgtgaactcaccctctggagatacgaatgaaacaaaacgctgatgcaataccataatcatcaatatgtaattctagcatttatcccctccattcagaggcagctgcttgtgcctgtctatagaaaatcagcttactgtactttttgtatgtacacgatagtccatagaatgttgcatcatcagcatgttggaaaatttgtcaatttgatc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0209400, RefSeq:Os05g0209400