|
|
| Line 20: |
Line 20: |
| | | | |
| | ==Structured Information== | | ==Structured Information== |
| − | {{JaponicaGene|
| + | [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 4]] |
| − | GeneName = Os04g0640700|
| |
| − | Description = Similar to Alpha-L-arabinofuranosidase/beta-D- xylosidase isoenzyme ARA-I|
| |
| − | Version = NM_001060573.1 GI:115460875 GeneID:4337166|
| |
| − | Length = 6778 bp|
| |
| − | Definition = Oryza sativa Japonica Group Os04g0640700, complete gene.|
| |
| − | Source = Oryza sativa Japonica Group
| |
| − | | |
| − | ORGANISM Oryza sativa Japonica Group
| |
| − | Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
| |
| − | Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
| |
| − | clade; Ehrhartoideae; Oryzeae; Oryza.
| |
| − | |
| |
| − | Chromosome = [[:category:Japonica Chromosome 4|Chromosome 4]]|
| |
| − | AP = Chromosome 4:32987653..32994430|
| |
| − | CDS = 32988007..32988578,32988664..32989080,32989177..32989524,32990300..32990397,32990511..32990680<br>,32991763..32992047,32993856..32994263|
| |
| − | GCID = <gbrowseImage1>
| |
| − | name=NC_008397:32987653..32994430
| |
| − | source=RiceChromosome04
| |
| − | preset=GeneLocation
| |
| − | </gbrowseImage1>|
| |
| − | GSID = <gbrowseImage2>
| |
| − | name=NC_008397:32987653..32994430
| |
| − | source=RiceChromosome04
| |
| − | preset=GeneLocation
| |
| − | </gbrowseImage2>|
| |
| − | CDNA = <cdnaseq>atggccatggcggcgaggggagtgttggccatggtggtggcggtggcggtggtgtggtgcaataatgtggcgagggcgcagacgccggtgttcgcgtgcgacgcgtcgaacgcgacggtgtccgggtacgggttctgcgaccggacgaagagcagcgcggcgcgggcggcggacctgctggggaggctgacgctggcggagaaggtggggttcctggtgaacaagcaggcggcgctgccgcggctggggatcccggcgtacgagtggtggtcggaggcgctgcacggcgtctcctacgtcggccccggcacccgcttctcgacgctcgtccccggcgccaccagcttcccgcagcccatcctcaccgccgcctccttcaacgcctccctcttccgcgccattggcgaggtggtgtcgacggaggcgagggcgatgcacaacgtcgggctggccgggctcacgttctggagccccaacatcaacatcttccgcgacccgcggtggggacgcggccaggagacgcccggcgaggacccgctgctcgccagcaagtacgccgtcggctacgtcaccggcctccaggacgccggcggcggcagcgacgcgctcaaggtcgccgcctgctgcaagcactacaccgcatacgacgtcgacaactggaagggcgtcgagcgctacaccttcgacgccgtggtgtcccagcaggatctggacgacacgttccagcccccgttcaagagctgcgtgatcgacggcaatgtggccagtgttatgtgctcctacaacaaggtcaatgggaagcctacctgtgcagacaaggacctcttgtcaggagtcatcagaggggactggaagctgaacggatacattgtgtcggattgcgattcggttgacgtactgtacaataaccaacactacaccaagaaccctgaagacgcagctgccatcacaatcaaatcaggtttggacctgaactgcggcaacttcctggcgcagcacaccgtggcggcggtgcaggccgggaagctgtcggagtccgacgtcgaccgggccatcaccaacaacttcatcgtgctcatgcgactcggcttcttcgacggcgacccgaggaagctccccttcggcagcctcggccccaaggacgtgtgcacgtcgtcgaaccaggagctggcccgcgaggccgcgcgccagggcatcgtcctcctcaagaacaccggcgcgctgccgctctccgccaagtccatcaagtccatggccgtcattggccccaacgccaatgccagcttcaccatgatcggcaactacgaaggtacgccgtgcaagtacacgacgccgctccagggcctcggcgccaacgtcgccaccgtgtaccagccgggatgcaccaacgtcgggtgcagcgggaacagcctccagctcagcgccgccacgcaggccgcggcgagcgctgacgtgaccgtgctggtggtcggcgccgaccagtccgtggagcgcgagagcctggacaggacgagcctcctcctgccaggacagcagccgcagctcgtctcggctgtcgccaacgcctccaggggccccgtcatcctcgtcgtcatgtccggcgggccgttcgacatctccttcgccaagtccagcgacaagatctccgccattctttgggtcggctaccccggcgaagccggtggcgccgccctcgccgacatcctcttcggataccacaatcctggtggaaggttgccggtgacgtggtacccggcgtcgttcgccgacaaggtctcgatgaccgacatgcgcatgcggccggactcgtcgaccggctaccccggccggacataccggttctacaccggcgacacggtgtacgccttcggcgacggcctgagctacaccaaattcgcgcacagcctcgtgtcggcgccggagcaggtggccgtgcagctggccgagggccacgcctgccacaccgagcactgcttctcggtggaggccgccggcgagcactgcgggagcctgtccttcgacgtccacctccgcgtgcggaacgccggcgggatggccggcgggcacaccgtgttcctcttctcgtcgccgccgtcggtgcacagcgcgccggcgaagcacctgctcgggttcgagaaggtgtcgctggagcccggccaggccggcgtggtggcgttcaaggtggacgtgtgcaaggacctgagcgtcgtcgacgagctcggcaaccggaaggtggcgctgggcagccacacgctgcacgtcggcgacctcaagcacacgctcaacctgagggtttaa</cdnaseq>|
| |
| − | AA = <aaseq>MAMAARGVLAMVVAVAVVWCNNVARAQTPVFACDASNATVSGYG FCDRTKSSAARAADLLGRLTLAEKVGFLVNKQAALPRLGIPAYEWWSEALHGVSYVGP GTRFSTLVPGATSFPQPILTAASFNASLFRAIGEVVSTEARAMHNVGLAGLTFWSPNI NIFRDPRWGRGQETPGEDPLLASKYAVGYVTGLQDAGGGSDALKVAACCKHYTAYDVD NWKGVERYTFDAVVSQQDLDDTFQPPFKSCVIDGNVASVMCSYNKVNGKPTCADKDLL SGVIRGDWKLNGYIVSDCDSVDVLYNNQHYTKNPEDAAAITIKSGLDLNCGNFLAQHT VAAVQAGKLSESDVDRAITNNFIVLMRLGFFDGDPRKLPFGSLGPKDVCTSSNQELAR EAARQGIVLLKNTGALPLSAKSIKSMAVIGPNANASFTMIGNYEGTPCKYTTPLQGLG ANVATVYQPGCTNVGCSGNSLQLSAATQAAASADVTVLVVGADQSVERESLDRTSLLL PGQQPQLVSAVANASRGPVILVVMSGGPFDISFAKSSDKISAILWVGYPGEAGGAALA DILFGYHNPGGRLPVTWYPASFADKVSMTDMRMRPDSSTGYPGRTYRFYTGDTVYAFG DGLSYTKFAHSLVSAPEQVAVQLAEGHACHTEHCFSVEAAGEHCGSLSFDVHLRVRNA GGMAGGHTVFLFSSPPSVHSAPAKHLLGFEKVSLEPGQAGVVAFKVDVCKDLSVVDEL GNRKVALGSHTLHVGDLKHTLNLRV</aaseq>|
| |
| − | DNA = <dnaseqindica>5853..6424#5351..5767#4907..5254#4034..4131#3751..3920#2384..2668#168..575#gaacgaaaataaagaggctttttgctcgcaccgcgccgtccttgtcacgggccgcgctcaccagctcacacacacacactcgcaaccaccgcgctcgccgcgcgcgctctcggcgcgccacggcctatataaagtggcagtggcgaggagcaaggggagcaacgaccatggccatggcggcgaggggagtgttggccatggtggtggcggtggcggtggtgtggtgcaataatgtggcgagggcgcagacgccggtgttcgcgtgcgacgcgtcgaacgcgacggtgtccgggtacgggttctgcgaccggacgaagagcagcgcggcgcgggcggcggacctgctggggaggctgacgctggcggagaaggtggggttcctggtgaacaagcaggcggcgctgccgcggctggggatcccggcgtacgagtggtggtcggaggcgctgcacggcgtctcctacgtcggccccggcacccgcttctcgacgctcgtccccggcgccaccagcttcccgcagcccatcctcaccgccgcctccttcaacgcctccctcttccgcgccattggcgaggtcagcatgcaacaacacctcccacttcttcttctcttccatgtcaccattttcgatctgcattgcactgcacaacctgcattgcgatttccggtcgcgtttggtgcgatttgacggtggtgcgcgggttggtggggttgggggattcggtgcagtgcggtgcagggtttgatgagagaatgttgcttttttttttttgttcttcttcttttcatcatccatgcaatgtggcaagccacgaaaagccgcaaaagcgcgtcacggattataccattccgcttggtttcctttcgccgtcgcagaccgcgcatttacgctgctgcttgttgccaagctacttccaggttaaaagaagcgccgtaacaataaccatagtaaatttctcccctagaatctactgtagctagcttagaagtactttttacaatgggtacacattttcatatggaaaagcacggtgaaagtaacgcacgttttactatgctcaaaccggcaaaaccactgcgacgaaagaaaaaacaagaatcagatgatagccactgataagtcacacaattagcacatttcatcattttgcacgtcatgtgattcctgtgcttgaaggaaagaatgtgtgtgaacatagtcagtatggtacacgcattgccccagcaacagctgcgatgcaacgcacctatgcatggctgtgcctgcgccgtccaagatttacggcaggatatgctggtgtcccttgtcacgggcgttttgtacgtagcagcggcgttctaggccaggacccccactggaattttagcattccaatatcctatccatctgataattgcataaagggttttattataaaaaagaaaattacatgaagggttaaagagcatttaggtttgcaagcaaggaccacagagaaaaatgggtttaggccaatgaccttgctgcacattgcacccaaagacatgtacagtctttctccatgtgtggattcagagtttcagacatgggcatttcttttctgcgcccaagatgatactgtctcgtggattgcattaattggacgctagcacgctgctcgtcgtcaggagccactgcttagcttcccccccatctgttgaggcgtcactgtctcatggggattaattcagaaatggaggctcaaaaagcttggtccatgatgtataatctgatagtactggtacgtgaggccctctctccgtgcagcttttaccaaagttcagttaatcatcagctccatcggcacctagctcctgtcctcatcgagtttggaaaagtgtcatttttccttccaactcgccaagaacaatgaggtgaacgtcgtaggatattagttagttctcatttccagatttcctgggtacgatcgatttcgtttgggaattagctataacatggactaatcatgtgttcccttgaaactggagacatcagaccatattaagctttgtcccaagaatccagctgcggcatgagacaattcagagtcaggatcatatgcctcgcatcttatcttcggttgcacctaccaaattatttgcagcttgaccacggtctatccggtagcctactccagtactactactagtactgttcttttcttattattttttgttgttgttgttgaaaattcagtactactatctacgagtatgacgcagcgaacatgatgcatgcattgcacgttaatttccagtgaaatgcactgaacattttacaagttggtgaaatggtctgatcggatgaatatttttctgacgagaggatgggaaactgtgtgcgatgtgttctgatttctgaaggtggtgtcgacggaggcgagggcgatgcacaacgtcgggctggccgggctcacgttctggagccccaacatcaacatcttccgcgacccgcggtggggacgcggccaggagacgcccggcgaggacccgctgctcgccagcaagtacgccgtcggctacgtcaccggcctccaggacgccggcggcggcagcgacgcgctcaaggtcgccgcctgctgcaagcactacaccgcatacgacgtcgacaactggaagggcgtcgagcgctacaccttcgacgccgtggtaagctaatccgatcatcttcttgtttctctgatgcattggtaagcaatggccatggcgtgaatgcgccgtgctcgagttgccgttttgcacaattgaatactgcctgctcacctgccatggccgcagcagcaggtgatacacatgcgagtaaatgagctccgcttgctacagtgagaatcagttggtgattgacccatgtagcagcaaccaacctctccctttcgttagtgtaattgaggatgcatctccattttacgtaagtggccaatcaatgttcgagtacagccgttgccgttgattggaccattggatccgtctctctccctgcgagatgacgccgacaatagcatgtagacgaacctctacgacaagttaattaggcccatacggattactttaattttctgtacttactcttcgtggctgcaccactgtgcttgttatttggacagtaacatgctggtttttgcacctgaatagaatactgatcattccacggaaccttaaattaagttagatagctataatttataaacatgggtttttttaactaaggatccaggaatgtatgaacacgtatagataaaacaaattgcagattgttaatttcctcagattctggtttgagttgttgcagttccccgaaatggcagatcttggccatttctacctaccaaaactcataaaaaacactgactttgcacatcgctggcagcgtcgcggcactgttgatacagatgattggttttttattcgcacaagtacagagcacatgactggaaccttttgcttttgtgcatgttaaatttgtgaatgctaatcagataaactaaaaaaaaaatactgcatctaacataatcatgcgtgtcgcatcagaaccagctttttaggcctaaaaagcttatcaatacaatttgatacacccagcattgttggtatgttctaccaaactgaactaaaaattcagtattagaaatgaaaatagaggtagtgggagaagagtagcaatcaccaatgtgtgtggccatgtgttcattgctcatactcgtgtcccaattcgtgttcttgtgaatcttcaggtgtcccagcaggatctggacgacacgttccagcccccgttcaagagctgcgtgatcgacggcaatgtggccagtgttatgtgctcctacaacaaggtcaatgggaagcctacctgtgcagacaaggacctcttgtcaggagtcatcagaggggactggaagctgaacgggtcggtctctccctactcctcttaacacttttagaacttcagccatctgatgctttagagaagattcagagatcttgtaactcttgttctaatggtgtatgttgttcttgcagatacattgtgtcggattgcgattcggttgacgtactgtacaataaccaacactacaccaagaaccctgaagacgcagctgccatcacaatcaaatcaggtactgttcattccttagtcacaaccacctcttaactatatgcattcccatgtagtacagacaatatgcggttgcaggattcgatggtctaacctctgacgagatcaaaccgttgattttcctttaaagtttggtttgattaacgcgattcctagcagctaggcaattatagtacgagttgatatgtgcagtagccatcgggttgttagggagtcttagtgtaattgatgggggcattagcagcgtctttagagcttaataggccttgataacctgcaacctgacctgacgaaattattccaagctgtgtcggtgaacccacggtatcattaggtagcactactgattttcagttatgttcaagtgcagtagtacaagactgctaagtggagtagctcctactgttttccattctgtatctgtcattatagttttgaccaatactgattaccacaggcaaaagagaagttacataattctgctgcattttatcatgtgctacaccgtcacataattttgtcttcaaatttgtgagaacgctataactattagctagtactcctactctgtatcatgaacctatcctcaagtttttcggcactatactgatgaatggaccgaaacagattaatgatttgtcaggcctcaccgtgatgaaaaaactcctcaactgaggaccatttctgttcatactacactaacaaatcttctgcattcaacctttcgtttatttatttttacatttttccttatttgtttgaccaaattgtggcaggtttggacctgaactgcggcaacttcctggcgcagcacaccgtggcggcggtgcaggccgggaagctgtcggagtccgacgtcgaccgggccatcaccaacaacttcatcgtgctcatgcgactcggcttcttcgacggcgacccgaggaagctccccttcggcagcctcggccccaaggacgtgtgcacgtcgtcgaaccaggagctggcccgcgaggccgcgcgccagggcatcgtcctcctcaagaacaccggcgcgctgccgctctccgccaagtccatcaagtccatggccgtcattggccccaacgccaatgccagcttcaccatgatcggcaactacgaaggtgacaccaattctggacaagctgatttgatcggtcaagaagagaattatattctcgtgcactgatcggatgaatgctggtgatgtcatggtgcaggtacgccgtgcaagtacacgacgccgctccagggcctcggcgccaacgtcgccaccgtgtaccagccgggatgcaccaacgtcgggtgcagcgggaacagcctccagctcagcgccgccacgcaggccgcggcgagcgctgacgtgaccgtgctggtggtcggcgccgaccagtccgtggagcgcgagagcctggacaggacgagcctcctcctgccaggacagcagccgcagctcgtctcggctgtcgccaacgcctccaggggccccgtcatcctcgtcgtcatgtccggcgggccgttcgacatctccttcgccaagtccagcgacaagatctccgccattctttgggtcggctaccccggcgaagccggtggcgccgccctcgccgacatcctcttcggataccacaatcctggtgagtgcattgcatctctgaattgttctctttctcagaagaagttttttgacatgtgagctgagctgatcaccatactgttcaggtggaaggttgccggtgacgtggtacccggcgtcgttcgccgacaaggtctcgatgaccgacatgcgcatgcggccggactcgtcgaccggctaccccggccggacataccggttctacaccggcgacacggtgtacgccttcggcgacggcctgagctacaccaaattcgcgcacagcctcgtgtcggcgccggagcaggtggccgtgcagctggccgagggccacgcctgccacaccgagcactgcttctcggtggaggccgccggcgagcactgcgggagcctgtccttcgacgtccacctccgcgtgcggaacgccggcgggatggccggcgggcacaccgtgttcctcttctcgtcgccgccgtcggtgcacagcgcgccggcgaagcacctgctcgggttcgagaaggtgtcgctggagcccggccaggccggcgtggtggcgttcaaggtggacgtgtgcaaggacctgagcgtcgtcgacgagctcggcaaccggaaggtggcgctgggcagccacacgctgcacgtcggcgacctcaagcacacgctcaacctgagggtttaaattgattaggagttggaattaaacgggagatttgctagtgaggaagggcctctgatctgattgatacacggagtttggaattggattcgtcaagggaatttgcattacgagtggccgtcagaaatcagaattggttaatggggggtgtaataaggacggactcccccgttggagagaattggatcctcgggggtgggtcttttgctgtgggtgttaacatttgatttatttggagggtcgatttgcaactgtaatctttggaaaaagaaatttccgcaagtgtaattgattggaagggaaattagctcattttcgtccattcaattcaattcaaaatttcaaatcgttgctctc</dnaseqindica>|
| |
| − | Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001060573.1 RefSeq:Os04g0640700]|
| |
| − | }}
| |
| − | [[Category:Genes]] | |
| − | [[Category:Japonica mRNA]]
| |
| − | [[Category:Oryza Sativa Japonica Group]] | |
| − | [[Category:Japonica Genes]] | |
| − | [[Category:Japonica Chromosome 4]]
| |
| − | [[Category:Chromosome 4]]
| |
Please input one-sentence summary here.
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
