Difference between revisions of "Os04g0658300"
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==Annotated Information== | ==Annotated Information== | ||
===Function=== | ===Function=== | ||
| − | + | the rice rubisco activase (Rca) gene, variants of the Rca gene promoter (one full-length and four deletion mutants) fused to the coding region of the bacterial reporter gene b-glucuronidase (GUS) were introduced into Arabidopsis via Agrobacteriummediated transformation | |
===Expression=== | ===Expression=== | ||
Revision as of 13:10, 8 June 2014
Please input one-sentence summary here.
Contents
Annotated Information
Function
the rice rubisco activase (Rca) gene, variants of the Rca gene promoter (one full-length and four deletion mutants) fused to the coding region of the bacterial reporter gene b-glucuronidase (GUS) were introduced into Arabidopsis via Agrobacteriummediated transformation
Expression
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Evolution
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Labs working on this gene
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References
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Structured Information
| Gene Name |
Os04g0658300 |
|---|---|
| Description |
Similar to Ribulose bisphosphate carboxylase/oxygenase activase, chloroplast precursor (RuBisCO activase) (RA) |
| Version |
NM_001060663.1 GI:115461055 GeneID:4337267 |
| Length |
4502 bp |
| Definition |
Oryza sativa Japonica Group Os04g0658300, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 4:33973682..33978183 |
| Sequence Coding Region |
33973978..33974085,33974307..33974399,33974736..33974791,33975098..33975204,33975341..33975542 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008397:33973682..33978183 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008397:33973682..33978183 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggccaccgccaccgccacctccctcgcctcctccgccgcgcaccgccgcctcccgccctcgcgctcagccgctagctccatcctgagagcccccaaccggggccgcctctgccccggctccccgtcggtgctccgcgcgtcgtcctcgtctccgtcgtctccccagcccaccgccggcggtgatgagggggaggaggaggaggaggggcggaggctgtcgaagcagtcgtcgtgggaggcgaaggactccgagggggatgactacctctaccgcctcgggaaggaggccgacaacatgaacatcgccgtcggcgcgcggagcggcatcgtcgacgacctcttcgtcggcaacttcctcggcaaagactcggatattgtgttcgattaccggcagaaagcgaccaggacgtttgagtacctgcaaggagattattacatcgcacccctcttccttgataaagttgcatgtcatattgtgaagaactaccttgcacatattcttactatcaagattccccttatacttggaatctggggtggaaaaggccaagggaaaacattccagactgaacttatatttagagcaatgggtgttgaacctgttattatgtctgctggagaactagaatctgagaaagcaggagaacctgggaggcttatacgtgaccgatacaggacggcttctcaagtaattcaaaaccaagggaaaatgagtgttttgatgatcaatgacctagatgctggtgttggaagatttggtaacacacaaatgacagtaaataatcaaattgtgattggaactttaatgaacttggcggataatccaaccagggttagcattggccagaaatggagagaatctgatgtaacacacagagtgccaataatagttaccggaaatgatttttcgacactgtatgctcccttgattcgtgatgggaggatggaaaagttctattggcagcctggccgtgaagatataattaacattgttcaccgcatgtatataaaggatggtttgtctttcgaggatgtatcaaaagttgtagacacttttccaaaccaagctctggacttttatggagctttgagatccaggacatacgatcgggcaatcttgcagtgggtagaagagattggtggtcatgaacaactaaatgaaaagcttctcaagcgaaagaaaggagaggagcttccaacatttattcctccaaagaccactgtagatgcgttgattgaatctggggactctctggtgaaagagcaagaactgataatgaattcgaaactgtcaaaagaatatatgaagaatttagatgattag</cdnaseq> |
| Protein Sequence |
<aaseq>MATATATSLASSAAHRRLPPSRSAASSILRAPNRGRLCPGSPSV LRASSSSPSSPQPTAGGDEGEEEEEGRRLSKQSSWEAKDSEGDDYLYRLGKEADNMNI AVGARSGIVDDLFVGNFLGKDSDIVFDYRQKATRTFEYLQGDYYIAPLFLDKVACHIV KNYLAHILTIKIPLILGIWGGKGQGKTFQTELIFRAMGVEPVIMSAGELESEKAGEPG RLIRDRYRTASQVIQNQGKMSVLMINDLDAGVGRFGNTQMTVNNQIVIGTLMNLADNP TRVSIGQKWRESDVTHRVPIIVTGNDFSTLYAPLIRDGRMEKFYWQPGREDIINIVHR MYIKDGLSFEDVSKVVDTFPNQALDFYGALRSRTYDRAILQWVEEIGGHEQLNEKLLK RKKGEELPTFIPPKTTVDALIESGDSLVKEQELIMNSKLSKEYMKNLDD</aaseq> |
| Gene Sequence |
<dnaseqindica>4099..4206#3785..3877#3393..3448#2980..3086#2642..2843#2326..2380#1723..1784#1460..1573#1278..1340#821..830#613..698#71..440#acaacacgacggccgctcgccgatcacacgctgacgcgcacacaccggcgatttctcagccgcaatcgccatggccaccgccaccgccacctccctcgcctcctccgccgcgcaccgccgcctcccgccctcgcgctcagccgctagctccatcctgagagcccccaaccggggccgcctctgccccggctccccgtcggtgctccgcgcgtcgtcctcgtctccgtcgtctccccagcccaccgccggcggtgatgagggggaggaggaggaggaggggcggaggctgtcgaagcagtcgtcgtgggaggcgaaggactccgagggggatgactacctctaccgcctcgggaaggaggccgacaacatgaacatcgccgtcggcgcgcggagcggcatcgtcgacgacctcttcgtcggcaacttcctcggcaaagactgtacgcgctccagcacttggatgccccgttcgatccaaataccatcttataataaaatgtcctgaattgtttggttcctgaacatgagattctgtatactaacttcagcagtagacgatctttccttggttacagctctatatatatagttacttgtgaaatgtgtttgcagcggatattgtgttcgattaccggcagaaagcgaccaggacgtttgagtacctgcaaggagattattacatcgcacccctcttccttgtgagtgtaattttagttcatcttcagctgatctttttttttttactgcatcctcgtacttttatgctgttctaggtacctgattgacaaagatttgacactgcagattcgttgtggtgcaggataaagttggtaagcaatttaatgtaggaggaagcacattgttataatcaggtatctcactcttacagtttgaagagactacatctttcgtttcacctgcataaacagtggctactgaagtatcagtgtccttctgtataagaaactgaacaagttatacaaaggtgtaacagttgccgaataagcttaccaccatataccaacagtccctagaggcctagactgaatatatatatttttgggtcaaactatcaaataatggcatgcaatgttggcagcatgtgaaatatatgcaaatcttacatttacattaattgtgattatgctaaactcttccttaataatatcttgaacttttatatggtatatattcttgtggctatagtgtgcatgacaaatttattttattctttttctccaggcacacatactaaaaggactgcttgatgtttgcagcatgtcatattgtgaagaactaccttgcacatattcttactatcaagattccccttatacttggtagtgcacttctctttgtttctctctgtgtaattgggatatgaaataatacatggttgtagttcaatattattctttagttcgttttcaatatttttgaggaacattgcacaatgcaggaatctggggtggaaaaggccaagggaaaacattccagactgaacttatatttagagcaatgggtgttgaacctgttattatgtctgctggagaactagaatctgagaaagcaggtcaaagacacttgaatttgtgcttactgtttacatgctttatgtactctgctatattttgcaaggttgctatcaatgtggtgctccgtagatcatcaaagggtctcacgttcattagtttctcatgtgtgtttctgctattgttgcaggagaacctgggaggcttatacgtgaccgatacaggacggcttctcaagtaattcaaaaccaagtaagcaggtgttttcggctactcagtttcagatatgtaccttcaaattcagttctcagttttgagcacaaaacaaaataatgtctcaatttttaaaacttgagtgttatttcacctgtttgagttttttttttttggtatgtgtggaaagctccagtatctgactagcttcgtaattgacacttgaaatcataaaaaaagattgtcgaaaattctattactactgtcactcagttctgaatatggcaaaaatgctccttacatattttagttttctattaccatcttttcaaacagctgattcaatatttggtgtttcctttttcttttttatacatcaagatagcgcaaatgttcctgaatgacttgatgcttgtccgttatgagaaatacaagtgctctcaactctgtagtgctttactcttctgtgttattactgtattatcatgataaagttaacagattaatgatgcctgtgggttttgttaattttcagtttacttcaatgattcctgttttcacaatttttttcatggtataggggaaaatgagtgttttgatgatcaatgacctagatgctggtgttggaagatttggtaagttttgtaaacatattttgtatggtaattgttgatcacagtgacctaggatattttgtttatgcttcctttttgagagcctgtcaacaatactacaatagtgtattcatctggtgtattaattattttccaaatattcttcagaagaagagcaccttttgtaggaagagatggatcttagagttttatttttcatcgaacatatggtgatttctttttgacagcaaactaagtgctatatatcaccgttgttttcaggtaacacacaaatgacagtaaataatcaaattgtgattggaactttaatgaacttggcggataatccaaccagggttagcattggccagaaatggagagaatctgatgtaacacacagagtgccaataatagttaccggaaatgatttttcgacactgtatgctcccttgattcgtgatgggaggatggaaaagttctattggtatgttcgttcttgcatctgaataaattttgttgcaacaaagtacagactgaattttatttgcaacaactagtcggatttaatttggcaaaaaaacttcaaagaatgatacttgaatgtgatatgtgattaataggcagcctggccgtgaagatataattaacattgttcaccgcatgtatataaaggatggtttgtctttcgaggatgtatcaaaagttgtagacacttttccaaaccaaggtaaccatttctccagaactgtaatttcattttgcagcatatgaaacaaggtctatgtttctttttatacaaacatacttagatgatatgtagggaaaagaaaaatagaagaggaactagaacagtaacatagccatcattccctcaagcaaaatacctattctttttttccttttctcaaacttcattattttccttgttcagttgctggtggaaactagttattattattatttagcatagaaagtatccatttttcaactacatttgaaaagtatattcaagagcgaactcaacccactgcagctctggacttttatggagctttgagatccaggacatacgatcgggcaatcttgcaggtacctgtgttgatttaggacagagttcgcaattctattttccagttcgttttagaaaaaaaattcacctgattttttgtatgtgaaacaatgtcatgtctgttactctgtttagttgttgaagatgtacttttttgcaaatactgttgaagatgtactggtgtgcaccaaacagcgtgtatggagacagcgtgcaccaaacaacttgacaagcagacaatttttttccaaaaagttttaacagttgtatttccgataaatgtaccattagggtagtagttactgtattgtacttcagacatacttttctgtaaactggaaatctcctgggtgcagtgggtagaagagattggtggtcatgaacaactaaatgaaaagcttctcaagcgaaagaaaggagaggagcttccaacatttattcctccaaaggtattcagtttttcaggccacataactggcttgcgttgtactgagatttctttgtcataatcagtttgctaaatgtctttccctaaaaaaaaagtctgctaaatgtcaaaacagcaagctcacatactgattcttcattactctactgaatatcatctaagtagtaattgttgtttctttcattgatatgtataatatcctgatgttattttgttcatcagaccactgtagatgcgttgattgaatctggggactctctggtgaaagagcaagaactgataatgaattcgaaactgtcaaaagaatatatgaagaatttagatgattagttcaaaacaaaaggtctaatagagaaagtactcgaggtgcctatctcaacccgattttgtatatttttgcatctctgaaaactgcacctttctttctctctctctttggtgcccctgcatcctacattctacagaacagttgcatgtgcaagtatacgatagtgtataaaagaacatgaaaaggtatacaagaattttttcggctgtgttttatgtattttagatatctttatataatcgtttgtacaatggtttgcaactctgaactatatataatgaacttcatatattatagt</dnaseqindica> |
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