Difference between revisions of "Os09g0535100"

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(Created page with "{{JaponicaGene| GeneName = Os09g0535100| Description = Zinc finger, RING-type domain containing protein| Version = NM_001070313.1 GI:115480368 GeneID:4347692| Length = 347...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os09g0535100|
 
GeneName = Os09g0535100|

Revision as of 21:03, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os09g0535100

Description

Zinc finger, RING-type domain containing protein

Version

NM_001070313.1 GI:115480368 GeneID:4347692

Length

3470 bp

Definition

Oryza sativa Japonica Group Os09g0535100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:21869766..21873235

Sequence Coding Region

21869813..21870040,21870139..21870517,21870607..21870650,21871389..21871428,21871524..21871647
,21871736..21871844,21872889..21872942

Expression

GEO Profiles:Os09g0535100

Genome Context

<gbrowseImage1> name=NC_008402:21869766..21873235 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:21869766..21873235 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggattcgaaggggagcggcggcgccgccggcgacaagcccggcgccgacgcgagccccgccacgaatccggccccgccagctgccgccgtggccgtcgccgctgcggccgcggacgccggaggggacgacgacgtggccgcggccgcggaggcgcggcggccgttcacggcgctcagccaggtcgacgccgacctcgccctggcccgcgtgctccaggagcaggagcgggcgtacatgatgcttcgcatgggcggaggcgtcggcgagggcagcgattacgggagctcggatgccgggagctacgagtacgacgacgaggccgaggaggactacgaggaggagctggagcaccacctccgcgtccaccaccacgagcacgccgttggggagggtcgtggcgagggagagcgagatggggagggggctgagggaagcgagttcgaggaggaggggttcgacgaggagtatgatgaggaggaagtcgagccagagctagaccccgcggagtacgaggacgatgaggcttatgcacgagctctgcaggatgccgaggagcgcgaagtagccgcgcgacttatggctctcgcggggatcagcgattggagacctgtggagcctgtagaggagcatgcgaatgatccacaggatgcgtggcaagaggttgacccagatgagtattcttatgaggaattagttgcattgggagaagcggttggtacaggacacagaggcctctctgctgctacacttgcttctctaccttcagtaacttacaaggcagaaggtgtccaagatggcaacacagagcaatgtgttatttgtcgtgtggaatttgaggatggtgaatctttgattgcactcccctgcaagcattcataccatcctgagtgcataaaccaatggcttcaaataaataaggtttgcccgatgtgcagcgcggaagtttccacatcggacagcaaccaggcatga</cdnaseq>

Protein Sequence

<aaseq>MADSKGSGGAAGDKPGADASPATNPAPPAAAVAVAAAAADAGGD DDVAAAAEARRPFTALSQVDADLALARVLQEQERAYMMLRMGGGVGEGSDYGSSDAGS YEYDDEAEEDYEEELEHHLRVHHHEHAVGEGRGEGERDGEGAEGSEFEEEGFDEEYDE EEVEPELDPAEYEDDEAYARALQDAEEREVAARLMALAGISDWRPVEPVEEHANDPQD AWQEVDPDEYSYEELVALGEAVGTGHRGLSAATLASLPSVTYKAEGVQDGNTEQCVIC RVEFEDGESLIALPCKHSYHPECINQWLQINKVCPMCSAEVSTSDSNQA</aaseq>

Gene Sequence

<dnaseqindica>48..275#374..752#842..885#1624..1663#1759..1882#1971..2079#3124..3177#gttcgttaatcctcgccccctctttctctctaatctccgccaaggcgatggcggattcgaaggggagcggcggcgccgccggcgacaagcccggcgccgacgcgagccccgccacgaatccggccccgccagctgccgccgtggccgtcgccgctgcggccgcggacgccggaggggacgacgacgtggccgcggccgcggaggcgcggcggccgttcacggcgctcagccaggtcgacgccgacctcgccctggcccgcgtgctccaggagcaggtatatgtgggggagatctcgcggtcgggtgttgttgctagggttccgggacctctcgattgacaatttgacatggttgttgtttggatcggctgcaggagcgggcgtacatgatgcttcgcatgggcggaggcgtcggcgagggcagcgattacgggagctcggatgccgggagctacgagtacgacgacgaggccgaggaggactacgaggaggagctggagcaccacctccgcgtccaccaccacgagcacgccgttggggagggtcgtggcgagggagagcgagatggggagggggctgagggaagcgagttcgaggaggaggggttcgacgaggagtatgatgaggaggaagtcgagccagagctagaccccgcggagtacgaggacgatgaggcttatgcacgagctctgcaggatgccgaggagcgcgaagtagccgcgcgacttatggctctcgcggggatcagcgattgtgagtagaaaaggagtgctgtttcttcagttcatttcacatgtttcagttattgctgtcgataatttcaatttgatattgctttgtagggagacctgtggagcctgtagaggagcatgcgaatgatccacaggtaatggtctatttttcttgttagttggacaaattgtgtttgttctgatatgtgggaatcctagagttggatgaaatgatcttggagtaataacataaatgatgatatagtctccttaattcgttgttgttgcaataaaatttacacctacattatgtatgacaaccgaaatcatatggaatttacacttgaagtgatgaatgtgccttgcaactttccttgtttccacgcactgttgataaacgataagactgcccccaaattcattttttgggtaccttccagcatccaaaatccatcttattttcagttgaacctggaattctttttcttgctcaccttcagtttcatatttgagtgataaactcatgagcatccaaggtttttatgtactttttatcacatttacagatcatgacttctataagaagtgttggttgtttacatcaggtggatttttaatcgtttatactttagtagagcttgtactgtccattagttgagcaatagtaagaccagaggtggtatgtggttcatgctgtggcttgtcaaatttgcatgctgtcctgtttactccatggattttggcatgctatattatctccaatggaagctgcatacttgaacttgggaaaatgtcttttcattttttccttactccattactcattgataatcagcttttatgaactggaaaaacgtcatttaacacgttgatatatttttaccaaaacccaggatgcgtggcaagaggttgacccagatgagtattcttatgaggcaagtttcattgttatatgttagccttctggcacctggcactgcatcagaagctttaagatgcaatattaatggttctctctatatgacttcaggaattagttgcattgggagaagcggttggtacaggacacagaggcctctctgctgctacacttgcttctctaccttcagtaacttacaaggcagaaggtgtccaagatggcaacacagagcagtatgtgtgaataatttgtctcataagtcataaccttactatcttacattaatcacatattaagtcctaatgtatctattgttgttagatgtgttatttgtcgtgtggaatttgaggatggtgaatctttgattgcactcccctgcaagcattcataccatcctgagtgcataaaccaatggcttcaaataaataaggtaaatatcatttccagatctatacaaactactgccatcctccatccatgtaggccgctttcttttcatgctgtgattaatgtctatgaagctatcttgttgcgcatacttgtgcttggacagagggctttatttgactgccaggctgcatatgttgctaagttttgtgtcaaagtgtggcaacccaagattgtctccaaatttattcgccacattagtgggaagtcttttttataggaaatgagtctgtcatgtgggtttaagggctaagaaaatgtgatattagttatttttatagtgggccctaaatttactagcaggccatatgttaggttcatggtttatgtctggatagaatttttgttattcttgctgtataggtatagttgttgccttgtacctttgtttcaccttcaggaagaataaaggatcactttggtagacctactaagtactagtgacattcatttttggtacaaaaattaggccattatatttgaaaggtttagcaaatcaccaaacatggaaaactcacgtgcatcagtgcataactagggaaatagttttgttgcatttgaaagttcattcctcttgggtgataatgcagtcttacaaaataaatccaatctgccaaagcattcacgcccttttattagttttggctaaaagatgtttgggtaacactaatagcactgcggatattttggtcatttgtgttatgcaatttaaattctgataagtttaagccaacgatttgatcatgtgaacttgcctctcgtttttggttgctttactgcctgcgcacattgattagctaggtatagctgtatatactgtgatttcattcatatttctctacccactacccaggtgcatcatgttagttattgtcttacgaagtacagtatatggattattcacatgtagctttctctagtttcgagttgtttacaatgtttaacattagtattgaacgtttaaattttataaacacgataccggtgtgtagttatcagttggtgacgaaatatccttgatgtgcaggtttgcccgatgtgcagcgcggaagtttccacatcggacagcaaccaggcatgaccaatctttgctgccattatggggcttgatgggagcaaatagcgggcatcatatggtcgcatcttgtaatgttggggagaaggcagataaaactttcggacacatgcgagggaccagcactatgatcttttgcgttcttcagtcctctcctggcttagctccactgtactctgtttgcccgtgccgctatgctctgcattccctgtgggggcctcatggctgttgtatgatccataaatgtacaatggttatattattatattatatattgctagccattcttttactacctc</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0535100, RefSeq:Os09g0535100