Difference between revisions of "Os05g0147400"

From RiceWiki
Jump to: navigation, search
 
Line 20: Line 20:
  
 
==Structured Information==
 
==Structured Information==
−
{{JaponicaGene|
+
    [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 5]]
−
GeneName = Os05g0147400|
 
−
Description = Similar to T-complex protein 1, zeta subunit (TCP-1-zeta) (CCT-zeta) (CCT-zeta-1) (Tcp20) (HTR3) (Acute morphine dependence related protein 2)|
 
−
Version = NM_001061176.1 GI:115462082 GeneID:4337802|
 
−
Length = 4555 bp|
 
−
Definition = Oryza sativa Japonica Group Os05g0147400, complete gene.|
 
−
Source = Oryza sativa Japonica Group
 
−
 
 
−
  ORGANISM  Oryza sativa Japonica Group
 
−
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
 
−
            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
 
−
            clade; Ehrhartoideae; Oryzeae; Oryza.
 
−
|
 
−
Chromosome = [[:category:Japonica Chromosome 5|Chromosome 5]]|
 
−
AP = Chromosome 5:2696881..2701435|
 
−
CDS = 2697090..2697165,2697240..2697358,2697438..2697545,2697630..2697698,2698004..2698098<br>,2698183..2698387,2698568..2698654,2698734..2698848,2699139..2699245<br>,2699497..2699589,2699686..2699733,2699836..2699987,2700436..2700571<br>,2700671..2700734,2701222..2701355|
 
−
GCID = <gbrowseImage1>
 
−
name=NC_008398:2696881..2701435
 
−
source=RiceChromosome05
 
−
preset=GeneLocation
 
−
</gbrowseImage1>|
 
−
GSID = <gbrowseImage2>
 
−
name=NC_008398:2696881..2701435
 
−
source=RiceChromosome05
 
−
preset=GeneLocation
 
−
</gbrowseImage2>|
 
−
CDNA = <cdnaseq>atgtcgctccgcgtgctgaacccgaacgcggaggtgctcaacaagtcggcggcgctgcacatgaacatcaacgccgccaagggcctccaggacgtgctcaagaccaaccttggccccaagggcaccatcaagatgcttgtgggtggagctggcgacatcaagctgaccaaggatgggaacactctcttgaaggaaatgcaaatccagaacccaacagctatcatgatcgcaaggaccgcggttgcacaggacgataccagcggtgatggcacaacctccactgtgctttttattggggagcttatgaagcaatctgagcggtgcattgatgaaggcactcatccacgttttttggttgatggttttgatgttgccaagagagcaactcttgaatttctcgagaagttcaagacatcagttgtcatgggcgatgaacctgacagagagatcttgaaaatgatagcaagaactactctaaggacaaagctgtacgaaggattggctgatcagttgactgatattgttgtgaatgcggttctatgcatccgcaaacctgatgaaccaatcgatctttttatggttgagataatgcacatgcgccacaaatttgatgttgacacacgtctggttgagggtctggtcttggaccatggttctcggcaccctgatatgaaacgcagggcagagaactgttatatcttgacctgcaatgtctcactggaatatgagaaaagtgaaataaatgcaggatttttctactcgaatgcagaacaaagagaaaagatggttgctgcagaaaggcgccaagttgatgagcgtgtgaagaggattattgaattgaaaaataaggtttgtgctggaaatgataaaaattttgtggtgatcaatcagaagggtattgaccctccatccctcgatctcctagctagagcagggattattggtctccgaagagcaaagaggagaaacatggagaggcttgtgttagcatgtgggggtgaagctgttgattcagttgatgatttgactgaagattgtcttggctgggctgggcttgtctatgagcatactcttggtgaagaaaagtacacctttattgagaatgtgaaaaatcctcgctcttgcactatactgattaaagggcctaatgatcacaccattgcgcaaattaaggatgctgttcgcgatggtctaagatctgttaagaatacggttgaggatgaagcagttgtgctgggagcaggagcatttgaggttgctgcgaagaagcatcttattgacaacgtgaagaaaactgtcaaaggacgagcacaacttggggtggaggcatttgctgatgctcttcttgtcatacccaaaacactagcagaaaattcaggtctagatacccaagatgttattgtctctctccagaatgaacatgatcgtggattggtggtgggattgaaccatcactctggcgaaccaattgatccccaaatggagggcatcttcgacaattactccgtgaaacgccagatcatcaattccggacccatcatcgcgtcacagttattgcttgtggatgaagtgatcagggctggccgcaacatgaggaaaccaacctaa</cdnaseq>|
 
−
AA = <aaseq>MSLRVLNPNAEVLNKSAALHMNINAAKGLQDVLKTNLGPKGTIK                    MLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDTSGDGTTSTVLFIGELM                    KQSERCIDEGTHPRFLVDGFDVAKRATLEFLEKFKTSVVMGDEPDREILKMIARTTLR                    TKLYEGLADQLTDIVVNAVLCIRKPDEPIDLFMVEIMHMRHKFDVDTRLVEGLVLDHG                    SRHPDMKRRAENCYILTCNVSLEYEKSEINAGFFYSNAEQREKMVAAERRQVDERVKR                    IIELKNKVCAGNDKNFVVINQKGIDPPSLDLLARAGIIGLRRAKRRNMERLVLACGGE                    AVDSVDDLTEDCLGWAGLVYEHTLGEEKYTFIENVKNPRSCTILIKGPNDHTIAQIKD                    AVRDGLRSVKNTVEDEAVVLGAGAFEVAAKKHLIDNVKKTVKGRAQLGVEAFADALLV                    IPKTLAENSGLDTQDVIVSLQNEHDRGLVVGLNHHSGEPIDPQMEGIFDNYSVKRQII                    NSGPIIASQLLLVDEVIRAGRNMRKPT</aaseq>|
 
−
DNA = <dnaseqindica>4271..4346#4078..4196#3891..3998#3738..3806#3338..3432#3049..3253#2782..2868#2588..2702#2191..2297#1847..1939#1703..1750#1449..1600#865..1000#702..765#81..214#atcgccgccgcgccgcgccgcgtgcgaatctccggcgaggatcgagggcgcctctggtcccgtctggtggtcggtcagccatgtcgctccgcgtgctgaacccgaacgcggaggtgctcaacaagtcggcggcgctgcacatgaacatcaacgccgccaagggcctccaggacgtgctcaagaccaaccttggccccaagggcaccatcaagatgtatggccttccttctctctctctctctctctctctctctctctcccatctcgttgggcgctcctgtgctagctggtttgatctggttcgatgcggggggaggtgttgcatcggctagatcacacacgcgcgcgcttgcgcgtagctgtagtagattcgcgaggcgtaggctttctctgattttttttgttgtgtgtgctgggctgtggatgcggtttctgtggtttgcagatgcgttatttctagatttgcgcggcgaggtgccgcacactgtttgatccagttcgtaggttcggaatggcggatgtttggaagggtttggtaatgaggtagctggctagctgctaagatttgcaatggcggtgttcttttttttttttttggaatagcgatttctagatgtctaggtagaggtacgatgtgttgtaatggctgtgatccagcgaaatttgctctacctgaatgcgttcgctattttgctgcacaggcttgtgggtggagctggcgacatcaagctgaccaaggatgggaacactctcttgaaggaaatggtatagttacgcttggcaattagtgtttgtggcgagggcattttagtgttggaagtgatctgatctttggtttgtggcttcttgcgtctcgatttacagcaaatccagaacccaacagctatcatgatcgcaaggaccgcggttgcacaggacgataccagcggtgatggcacaacctccactgtgctttttattggggagcttatgaagcaatctgagcggtgcattgatgaaggtatgttcatttgaacctatacctttttctatagttcaatatgactggatttataatatatcgattacatctgaaatatcacttgcgcgtctaggagaattgtaaaagcttatacaaaggaaggtgaaggatagagtaaaactagattctttgattatgtgttatgctctcccttctgttaaacatgtgtaatgtggagatattacgatgagaagttgtagcatggctcattgtgttttctagttaccttgtcatgcatttctaggctagtttggatcctcactgcacaaatttaatcttgaaaaataaggatatgcagaccttctgtgctaaggtcacagcacaaaattgtcttcaagtcgtaaatttgtgtaggcaaaaccttatctttatacgataacttgctacttactataaactcaatagtaactgattgtcattcttgtaggcactcatccacgttttttggttgatggttttgatgttgccaagagagcaactcttgaatttctcgagaagttcaagacatcagttgtcatgggcgatgaacctgacagagagatcttgaaaatgatagcaagaactactctaaggacaaaggtaggcgcagtttgttttcttgctttcaagctttctttacttgggcaggtaacgtatagactatataatatttcaacatttataaaatcgactattttgcagctgtacgaaggattggctgatcagttgactgatattgttgtgaatgcggtaatattttctttctgatatttgtttttcttgggaaggttcaagtttactcattgtatgaacatatttgaattttcattaaaatctatgttttaggttctatgcatccgcaaacctgatgaaccaatcgatctttttatggttgagataatgcacatgcgccacaaatttgatgttgacacacgtctggtatgtattcatttttctttatttctcaagatagacttattctgatcttcatattccctttagaagaacaagttattttacccagctaagcttttgaactgagcagcttgcctatccattctttatgctaatactaatctctgtatgattcagcagactaaaatgaatatgttgatttacatactatacagaattcgtaatggatacaatgtgacaatgcttaccccactgctttgatattgttattataggttgagggtctggtcttggaccatggttctcggcaccctgatatgaaacgcagggcagagaactgttatatcttgacctgcaatgtctcactggaatatgagaaaaggtacacgacttttacaaatatgtactttgttatgttggttaacacattcttatttgcccttttgtgttgatttcatctgctcatgcctctaagaaaacacgactttttataggctgttaaagtaacgtacttaaagcaagccatatttgctcttcatgtatgctaccttgtctgccgttaagaccggttgcacacacttgtacttagcttagttcctttacttgaaactattcctatatttgccatgcatcattgaagggaaactgttaactgatatatactcttctcagtgaaataaatgcaggatttttctactcgaatgcagaacaaagagaaaagatggttgctgcagaaaggcgccaagttgatgagcgtgtgaagaggattattgaattgaaaaataaggtagttcacttatttcacctgcagtgccttttttctgtacacttccagaaaatccttcatattgtttcatgaatttcaggtttgtgctggaaatgataaaaattttgtggtgatcaatcagaagggtattgaccctccatccctcgatctcctagctagagcaggggtaatgttctctgatggatctgaactacatactttcaagcttcaaccatttagattcctgcgtttgtttaggatgtttctgaatggaagcatcataacagctaatatttgttgttaaatctgttctttcaatttttattattggagcttattcttcaagatgcttttttacatgctacagattattggtctccgaagagcaaagaggagaaacatggagaggcttgtgttagcatgtgggggtgaagctgttgattcagttgatgatttgactgaagattgtcttggctgggctgggcttgtctatgagcatactcttggtgaagaaaagtacacctttattgagaatgtgaaaaatcctcgctcttgcactatactgattaaaggttgattactcttgaactataataatgatctttttccaatattctggtttggtggtgaacttactgtaaagtcaatatctccagggcctaatgatcacaccattgcgcaaattaaggatgctgttcgcgatggtctaagatctgttaagaatacggttgaggatgaagcagttgtgctggtaagctagagatggacagaacttcacgatccaccttgtgcacattaagtttggctacatctcttggttattttagattccattattttagtatactttaccagcttctgatgcataggccaaacagctataattacatttttagcacatcttttgttcatataagttgcagagttgccattagatgcatgtgtattccaaaggttgcttataaaatcatttttattatcttttatttttgaaatgaaaccatgtttattatcttcagactgcttgattcttacattgtcatttgtcaactgtagggagcaggagcatttgaggttgctgcgaagaagcatcttattgacaacgtgaagaaaactgtcaaaggagtaagtgtactgcaatgtcaatatgctttaacttcaatgtagcaaaacattgatattctctcgacttctgaaccttggcaacagcgagcacaacttggggtggaggcatttgctgatgctcttcttgtcatacccaaaacactagcagaaaattcaggtctagatacccaagatgttattgtctctctccaggtatgaacacattttcagtgctgcacctcatccttaaattggaggtcagtaattttaactgtttctgtgctttctgaagaatgaacatgatcgtggattggtggtgggattgaaccatcactctggcgaaccaattgatccccaaatggagggcatcttcgacaattactccgtgaaacgccagatcatcaattccgggtatgtaattaagttattcttgccttatttgcccaacaacatcctaaatcctaactggtttttctttggtgcagacccatcatcgcgtcacagttattgcttgtggatgaagtgatcagggctggccgcaacatgaggaaaccaacctaatactttccctacctgccgctgagtcctctgttttgtgggagatattacgcattttgtttggttattttgcctttctatctttagtttgtgcgtagtagtgaggtgggtgaaatgtccggaggttctgctagtttgttcctctttgactgtaacagatttcacttgtaatctttgtcacactgtcatttatgccgtcctgatgatttggg</dnaseqindica>|
 
−
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001061176.1 RefSeq:Os05g0147400]|
 
−
}}
 
−
[[Category:Genes]]
 
−
[[Category:Japonica mRNA]]
 
−
[[Category:Oryza Sativa Japonica Group]]
 
−
[[Category:Japonica Genes]]
 
−
[[Category:Japonica Chromosome 5]]
 
−
[[Category:Chromosome 5]]
 

Latest revision as of 08:18, 14 May 2015

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information