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| Line 20: |
Line 20: |
| | | | |
| | ==Structured Information== | | ==Structured Information== |
| − | {{JaponicaGene|
| + | [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 5]] |
| − | GeneName = Os05g0398100|
| |
| − | Description = Armadillo-like helical domain containing protein|
| |
| − | Version = NM_001062007.1 GI:115463744 GeneID:4338712|
| |
| − | Length = 8401 bp|
| |
| − | Definition = Oryza sativa Japonica Group Os05g0398100, complete gene.|
| |
| − | Source = Oryza sativa Japonica Group
| |
| − | | |
| − | ORGANISM Oryza sativa Japonica Group
| |
| − | Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
| |
| − | Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
| |
| − | clade; Ehrhartoideae; Oryzeae; Oryza.
| |
| − | |
| |
| − | Chromosome = [[:category:Japonica Chromosome 5|Chromosome 5]]|
| |
| − | AP = Chromosome 5:19375959..19384359|
| |
| − | CDS = 19375959..19376049,19376153..19376277,19376351..19376468,19376612..19376676,19376818..19376897<br>,19377000..19377063,19378399..19378538,19378629..19378752,19378839..19378898<br>,19378980..19379048,19379197..19379346,19380240..19380347,19380631..19380706<br>,19381018..19381112,19382787..19382861,19382981..19383101,19383194..19383366<br>,19383705..19383871,19384002..19384359|
| |
| − | GCID = <gbrowseImage1>
| |
| − | name=NC_008398:19375959..19384359
| |
| − | source=RiceChromosome05
| |
| − | preset=GeneLocation
| |
| − | </gbrowseImage1>|
| |
| − | GSID = <gbrowseImage2>
| |
| − | name=NC_008398:19375959..19384359
| |
| − | source=RiceChromosome05
| |
| − | preset=GeneLocation
| |
| − | </gbrowseImage2>|
| |
| − | CDNA = <cdnaseq>atggaggcggagcagcagcagcagccgccgcatcgcccgcgccgcaaggggcagaagaggaagttggaggacgaggccgcggcctccgcctcggccgcggcggcggcggcggcggccgccgccgccgccgccaccgcaaccccgtcgtcgctcgggagcgccggcgcagacgacgacaacgaggaggaggaggacggctcggccgggccggagatctgctgccgccactcccaggcggcgctggcccgcgaggtccgcacgcaggtcgacgccctccaccggtgcttctcctggcgccacgccgaccgcgccgccgccaagcgcgccacccacgtcctcgccgagctcgccaaaaacgaggaggttgtgaacgtgatcgtagagggcggcgccgtgcccgccctggtgtgccacctgaaggagccgcccgcggtggcggtgttgcaggaggagcagcagcctcggccgttcgagcacgaggtcgagaagggggctgccttcgctctcggcctcctagcagtaaagcctgaacatcaacaacttatagttgacgccggtgccttaccactgctggtgaatcttctaaaaaggcacaaaaatgctacaaacttgcgggcagttaacagtgttatcaggagagcagctgatgcaatcaccaatctagctcatgaaaatagcaacatcaaaacttgtgtcagaattgaaggcggaattccacctcttgttgaattgctagaatcacaggatctcaaggtgcagagagcagctgcaggggccttgcggacgctggctttcaaaaacgatgaaaacaaaagtcagattgttgattgcaatgcgttgccaactttgatattaatgcttcgatcagaggatgctgcgattcactacgaagcagttggtgtcattggaaacttggttcattcatccccaaatatcaagaaagaggttctcaatgcaggggccctgcaacctgtaattgggttattaagttcctgttgtacggagagtcaaagagaggctgctttgttgctagggcagtttgcttcggctgattctgattgcaaggtccatattgtgcaaagaggtgcagtccgtccgctgattgaaatgctacagtcagctgatgtccaacttagagaaatgtctgcttttgcccttgggaggcttgcccagagaagttcatttgtttcccaggacacacataaccaagcaggcattgcatataatggtggtttggtgcctctactaaagcttctagactcaaaaaatggatctctgcaacataatgctgcatttgccctttacggagttgctgacaacgaggactatgtgtccgacttcattaaagttggaggtgtacaaaagttgcaagatggagaatttatcgtgcaggccacaaaggattgtgtagctaagacccttaagaggttagaggagaagataaatggacgagtgttaaaacacttgctttatatgatgagagtaggagaaaaatctgtgcagaggcgggttgctctggccctggcacacctctgtgcgcctgaagatcaaagaacaatttttattgataataatggccttgagttgcttcttgatcttctggtttcggtgagcctgaagcatcagctagatggttcagtagcactatacaaattggccaacaaagctgcagcactttctcccatggatgctgcacctccatctccaacaccacaggtttatcttggtgagcaatatgtgaacagttcgacactttcagatgttaccttcttggtggaaggaaagcgcttttatgcacatagaattgcattacttgcttcttcggatgcatttcgtgcaatgtttgatggcggatatagggaaaaggacgcgagagacatagaaattccaaatatcagatggaatgtgtttgaactcatgatgagatttatctatacaggttcagtggaagtaactagcgatatctctcaggatcttcttagagctgctgatcagtatctattagaaggcctcaaacgtctgtgtgaatatacaattgcgcaggatgtgaatgtagacaacgtttctgacatgtatgacctatctgaagcttttcatgcaatgtcactcagacatacatgtgtcctatttatcttggagcagtttgaaaagatttgcgtcaaatctgggtcaagccagctgatccagcgtgtcatcccagagctccgcaacttcttcgctaaggcgctaaggccaagccacaggaatgcgcagccatga</cdnaseq>|
| |
| − | AA = <aaseq>MEAEQQQQPPHRPRRKGQKRKLEDEAAASASAAAAAAAAAAAAA TATPSSLGSAGADDDNEEEEDGSAGPEICCRHSQAALAREVRTQVDALHRCFSWRHAD RAAAKRATHVLAELAKNEEVVNVIVEGGAVPALVCHLKEPPAVAVLQEEQQPRPFEHE VEKGAAFALGLLAVKPEHQQLIVDAGALPLLVNLLKRHKNATNLRAVNSVIRRAADAI TNLAHENSNIKTCVRIEGGIPPLVELLESQDLKVQRAAAGALRTLAFKNDENKSQIVD CNALPTLILMLRSEDAAIHYEAVGVIGNLVHSSPNIKKEVLNAGALQPVIGLLSSCCT ESQREAALLLGQFASADSDCKVHIVQRGAVRPLIEMLQSADVQLREMSAFALGRLAQR SSFVSQDTHNQAGIAYNGGLVPLLKLLDSKNGSLQHNAAFALYGVADNEDYVSDFIKV GGVQKLQDGEFIVQATKDCVAKTLKRLEEKINGRVLKHLLYMMRVGEKSVQRRVALAL AHLCAPEDQRTIFIDNNGLELLLDLLVSVSLKHQLDGSVALYKLANKAAALSPMDAAP PSPTPQVYLGEQYVNSSTLSDVTFLVEGKRFYAHRIALLASSDAFRAMFDGGYREKDA RDIEIPNIRWNVFELMMRFIYTGSVEVTSDISQDLLRAADQYLLEGLKRLCEYTIAQD VNVDNVSDMYDLSEAFHAMSLRHTCVLFILEQFEKICVKSGSSQLIQRVIPELRNFFA KALRPSHRNAQP</aaseq>|
| |
| − | DNA = <dnaseqindica>8311..8401#8083..8207#7892..8009#7684..7748#7463..7542#7297..7360#5822..5961#5608..5731#5462..5521#5312..5380#5014..5163#4013..4120#3654..3729#3248..3342#1499..1573#1259..1379#994..1166#489..655#1..358#atggaggcggagcagcagcagcagccgccgcatcgcccgcgccgcaaggggcagaagaggaagttggaggacgaggccgcggcctccgcctcggccgcggcggcggcggcggcggccgccgccgccgccgccaccgcaaccccgtcgtcgctcgggagcgccggcgcagacgacgacaacgaggaggaggaggacggctcggccgggccggagatctgctgccgccactcccaggcggcgctggcccgcgaggtccgcacgcaggtcgacgccctccaccggtgcttctcctggcgccacgccgaccgcgccgccgccaagcgcgccacccacgtcctcgccgagctcgccaaaaacggtaaacgctccccccaccaccccgaaccctcgccgcaccgcaccgcgccgcgccgatccgtggttttccgcgccaggcttccgggcccgttcagctgaggcggatctggatgttgtgtttttcttcgcagaggaggttgtgaacgtgatcgtagagggcggcgccgtgcccgccctggtgtgccacctgaaggagccgcccgcggtggcggtgttgcaggaggagcagcagcctcggccgttcgagcacgaggtcgagaagggggctgccttcgctctcggcctcctagcagtaaaggttccctgttcgtgccgtactagtttttattcccatttcattgcaattattggtatttctttctcacctgagttatccaaatgtatcattccataataaaattaagagtagctttggatatgccatcgtctgccaaaatttaacccgagaacaactactgaacaagatagtaacacctaggaattcgtttagtagtttttatgtatacatgttccctatctccctttaagcgattcatggaaactggtgtttttgagcatgacctcagtaatatgtttttgatctaagttacttttgagaaatttagtcattaattacttaatgtgtttgcataacagcctgaacatcaacaacttatagttgacgccggtgccttaccactgctggtgaatcttctaaaaaggcacaaaaatgctacaaacttgcgggcagttaacagtgttatcaggagagcagctgatgcaatcaccaatctagctcatgaaaatagcaacatcaaaacttgtgtcaggtgttttttctatattttgttgatagtctgatgctccttcaactagggaactttttattgcttaatgatgtttttatattggtttactgcagaattgaaggcggaattccacctcttgttgaattgctagaatcacaggatctcaaggtgcagagagcagctgcaggggccttgcggacgctggctttcaaaaacgatgaaaacaaaagtcaggtgagatatcaaaatttcaaaataacgaggccaacattatgatatattttaacaccataatggtgcagttacatccatatttactcatactattttgtgtaattttccccttaatgcagattgttgattgcaatgcgttgccaactttgatattaatgcttcgatcagaggatgctgcgattcactacgaagcagtaagacactaggaatttattttttgtgaattatgaaccacacttctctgggaactcttttatgttaaggttgatgctgactgatatgcattgattgattatgcggttagtgttgcaaattttctagttatcagcaatcttgagcagcagttatcctaatgtgttctagaacataaatttcgaagtgctcatccttcatggccagggccacaaaaatcactttgtgttctcccagaacaagcaaaccctgttttcttgtttactgcaacaatttttatttaaagttctttttgttgaattcgattcaggttttctactatatcggcctccaaacaacatatggcaacaaataacaacaaaatcaatcaactactccaaaataacataggggaactggcagctacagtgctactacagtcatggggaatttgtaacaagcgtgtgaccattattttgaaccctctctacaacttaacattgaatatagaactacgggtaatgtgttacatagagaaccatggactactaaacttgattgcttgaaatgaacctagtgcgctaacatattaaagagtataaacttgcatgacttggacaaagcataaacaagcatgctgaaaagtgaaaacttagcatgaaattggtcaaccgagccaattaggtccatccgcaggtttaatgaaggtaaaaatgtcatgttaggctgttggaccgataaaacaaatttaatacagaggtattgatgcttaagatccatatcatagttaatcatgtcagttttctacttttctggcacttgactggaggatgggcatatctaactaactggttctgtaagcaatttgaggggacctgccaatctaaaattgaaattcaagagcttttgttacagagatcaacaaatttgatggcctattgacctattccaccgttttagaattattagtagccaaatacccgtgcacagtaacgatttagaataatttaccagaaattctaaacttgaaaaaaaaatcagttgaacatcaatctccaaataattcgatcacaaaccacatgtgcaaataatataattatcgagggaatattcttcaaccagtaaaaacatatatgtatgtatctatgcagagcacccacccgttgtactggtgtgggatggcagagccaccaccactactaccatcattagcttcttttgtaatagtagagataagcatggtgaaaaaacatcaattactgcaaacagcctaacaatgctagttatacacttcattgtcttacatagtaacttgatcctgtgatatccacatagaacaagtaaatcgcatgattatggtcttgacactgactcttctccatcaagtatttctatcagtactatgtatattcatatagttatacacttcattgtcttacataggagtaacttgatcctgtgatatccacatagaacaagtaaattgcatgattatggtctcgacacttcctctactcttctccatcaagtatttctatcagtattatgtatattcatatcattttggcttttttgcaccttgcaaggcttcctgtctgtatgaagtcttctattgatacaacaagcaagttattgaactacacttatgtactatctttttataatgcatgccaataagtactctgttcacatgtcaggttggtgtcattggaaacttggttcattcatccccaaatatcaagaaagaggttctcaatgcaggggccctgcaacctgtaattgggttattaaggtatgatcgtcatatgcagtttaggatcatatttttaaactatctttgaaaataattgaatgcattagaaatattttatgtatttgttgaaccctattgctgatgactcaaatgtaatatatttttttagctcagcatgagaacttttaacatttccaattactatggtagtaactgcttgcttcatggtacactccatacaattactttgaattgtacgcatgtttctgaatgatagttagcttacacctttactgctttaaattgagaatattaagttggctattatcttatggctgttcattttgcagttcctgttgtacggagagtcaaagagaggctgctttgttgctagggcagtttgcttcggctgattctgattgcaaggtacttgcttgttcttcgttcatttttagctggcttgtttctaattcttttctgatgagttaatgcagtggaggagcaaaaaacaagcttaaataagtttcccttgatataatattctggtgtgaaagagatgactgttctgttatgttttgctacttgctaaatattttatgtgcacaatagaaggtttaagcatggaattctagaatatatgaatgaaaagaagctgatgttttcttaccttttcgttgtttaacatcctgtgcatgtgtattccctacaggtccatattgtgcaaagaggtgcagtccgtccgctgattgaaatgctacagtcagctgatgtccaacttagagaaatgtctgcttttgcccttgggaggcttgcccaggtttgttagcttgttttactgtgtgtagtttagggacaaaacactgaaaaagaacaacactgacatgccacttagtaactttgctcctcttaattctaacaatggcagctgtatgttaggacacaattataacaataattttgaagaaattataatgagtcttcactcttgaatgaatagatataggctccttaccgtgtgttcttttgttattcgtcggcacagtagtgacttaacaacagtttaggtataatatatctgaatagctaaagtatcccagctcattctccatacaggcaaacttttcatactaacttttgagcacctgagagtcgtgcctttcaaatgttcattgcgcagagtatccactatcctgtgaagagtaacactggatattttctagacctgaatctgtgcatgtgggaatggtcctatagtgagggcaagatcccatttggtcattggctgattcttgcatagtgatgacttgaagtcacccatgcaaatacatctgtagaaccgagagaataatttctgtcacttgattatttgattatatttatgcaagggacaatccacatgcaatcatactaacatcttagaatggtgatactaacatattttggtctttgtaagccaaaagctctgcatatacccagatatcgcttcatgcgtaatgcaccagttgaaacatgtcaaaatgatcatcgatataacatgttggatatattattcttttgcctatcaattctactttgctctcagcagagcacattctgtatgttagtgatgaagtcagatatctgagacacagacctagttattttcttctcaaaaccctaggctgtaaagatattaaagaacttctataacatgcaccggtcaattcacagagaagttcatttgtttcccaggacacacataaccaagcaggcattgcatataatggtggtttggtgcctctactaaagcttctagactcaaaaaatggatctctgcaacataatgctgcatttgccctttacggagttgctgacaacgaggtaaataatgattattcaagcaaatggtaacccatttgtggatagcttgttttccactagtaggctaatgattcgatttcggaaaaggaaacgatctcttactttattttttttttcaaaataaatgactatactcttcttattgtaggactatgtgtccgacttcattaaagttggaggtgtacaaaagttgcaagatggagaatttatcgtgcaggtatgccagccatcatattattgttggattactttcaatgtaacttgcaagtgagtttaattacgtaattttaaatttcaggccacaaaggattgtgtagctaagacccttaagaggttagaggagaagataaatggacgagtaagctgtgctcagtgcccaccagattttgcttttccatcgccacattctagcatttagcttattttgttcctgtatgaccgcaggtgttaaaacacttgctttatatgatgagagtaggagaaaaatctgtgcagaggcgggttgctctggccctggcacacctctgtgcgcctgaagatcaaagaacaatttttattgataataatggtatgagcaattttaaatgcaccaaaatgtgctcctttgtattacttttgtgtaatgtttaccattgattaagttattaaattaattcaggccttgagttgcttcttgatcttctggtttcggtgagcctgaagcatcagctagatggttcagtagcactatacaaattggccaacaaagctgcagcactttctcccatggatgctgcacctccatctccaacaccacaggtagagaattggttcttaattcaacccaacctttccttgtttatgccaaaggctttatgagttgattgtggtgtgctatgtaaaaggttttcaatgtgatatggactgaactacgatgtggtaatgcccatgcattgattttattttgtataatcaatgcattaaaagggtttttttgttagaaataaacaaaacagtacatgtttaggggaaatttgtgtaatgcaacaaaactagctaattgttggctgacaatcttgtttgattagtattttgacaggaaattggaggtggatgtataatagctgtaaataaatatgcaacacagattcttggcttcttggttgtgcgaattatgtgatagctgcggaaaattgttgcaaaatattaactaaaggaacaatcctgtacattcatcgccaatatttcattaagaagcttagggttactaggatgtgaatattaatagctaagtttaatgctagttttaagttgaaaaaagaaacattagtttacataacttataacatactgtaacatttcagttgaaccacccaacagtttttcaaacttgtactatcttaagttaattttggagcagtctatgataatagttttttaagacctatgtgttatttgactcgtcagtagcggtaacattgcctttaatcatgttcttgttgccttacctcgaaatttcaaagtttttatcatgatattggtggtacaactgttgccatgaaattctagaagtatgattgactgatattccccatggctcatgtaaactaaataatagaaacatctgtcataaatactgatataaatggtgcttcatctcgcaaattgcacaacagcctcgtcacactttcacacttatttatatacgtttcatcctagtcaacactatgcatgatttcccattcatgtcttttaagatgtgtgaccttcaggccatctgctttctgagcaaaccaagcatttatttcctttgttaggcttttgtaggacaaaacttttaggaactttgtcagacatgaccaagttgttgcaagatttgaattcactcaggcagtatgtatgcatctgtgcatttctatggattatttttatcctcagccttcagagcatagcgcacatagaattcagatatactgccatctgaatttatatgccggatagtctgttcctaattagcagtcagtcctattaataaggtgttatctcagtaaaacctagtttgtgcaatgctggattcgaatatatcatttggagcaattggtccatcaacagtgctggcaatccctgatacttaatgtattttcttcattgtaggtttatcttggtgagcaatatgtgaacagttcgacactttcagatgttaccttcttggtggaaggttggtattttatctgtggacccagttgtcaccagaaagtcactttagatacttcgatcttttccatagaatccatgtaaatcatattcctgttgtctccaggaaagcgcttttatgcacatagaattgcattacttgcttcttcggatgcatttcgtgcaatgtttgatggcggatatagggtgagtcttgtgtagcatttcttttttcgtttggtacatgtggatttgtttcttagtggaacaattcttgttgaggtatattttttcattttttaaagaacctcaatgtgtcttgactcgaatactatttttcttaaccaggaaaaggacgcgagagacatagaaattccaaatatcagatggaatgtgtttgaactcatgatgaggtaagtcagctttgagttctcttcctccttggccatggacgctttgcttctgtgcacatatctgtaattgttattattcttttctggtttgtgggcaaatgcctgctaaactagagtctgaatatcctatttggtatatgcagatttatctatacaggttcagtggaagtaactagcgatatctctcaggatcttcttagagctgctgatcagtatctattagaaggcctcaaacgtctgtgtgaatatacaattgcgcaggtaattaggattgttacctgtatgctatgctcaaaatgctggcttggtcttatttaatatatctgccttgcaggatgtgaatgtagacaacgtttctgacatgtatgacctatctgaagcttttcatgcaatgtcactcagacatacatgtgtcctatttatcttggagcagtttgaaaagatttgcgtcaaatctgggtacacttcctcacctagtgtcctgttcctaggtccaaatgtttgtgttatgtaactcattttaggtaacagaaatcatttgccatgccattttgcaatgcaggtcaagccagctgatccagcgtgtcatcccagagctccgcaacttcttcgctaaggcgctaaggccaagccacaggaatgcgcagccatga</dnaseqindica>|
| |
| − | Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001062007.1 RefSeq:Os05g0398100]|
| |
| − | }}
| |
| − | [[Category:Genes]] | |
| − | [[Category:Japonica mRNA]]
| |
| − | [[Category:Oryza Sativa Japonica Group]] | |
| − | [[Category:Japonica Genes]] | |
| − | [[Category:Japonica Chromosome 5]]
| |
| − | [[Category:Chromosome 5]]
| |
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Annotated Information
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Expression
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Structured Information
