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| Line 20: |
Line 20: |
| | | | |
| | ==Structured Information== | | ==Structured Information== |
| − | {{JaponicaGene|
| + | [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 5]] |
| − | GeneName = Os05g0434000|
| |
| − | Description = RNA-directed DNA polymerase (Reverse transcriptase) domain containing protein|
| |
| − | Version = NM_001187514.1 GI:297724158 GeneID:9270885|
| |
| − | Length = 7473 bp|
| |
| − | Definition = Oryza sativa Japonica Group Os05g0434000, complete gene.|
| |
| − | Source = Oryza sativa Japonica Group
| |
| − | | |
| − | ORGANISM Oryza sativa Japonica Group
| |
| − | Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
| |
| − | Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
| |
| − | clade; Ehrhartoideae; Oryzeae; Oryza.
| |
| − | |
| |
| − | Chromosome = [[:category:Japonica Chromosome 5|Chromosome 5]]|
| |
| − | AP = Chromosome 5:21277094..21284566|
| |
| − | CDS = 21277094..21277537,21277694..21278205,21279829..21281851,21282171..21282242,21282342..21282575<br>,21282636..21283398,21283643..21283869,21284405..21284566|
| |
| − | GCID = <gbrowseImage1>
| |
| − | name=NC_008398:21277094..21284566
| |
| − | source=RiceChromosome05
| |
| − | preset=GeneLocation
| |
| − | </gbrowseImage1>|
| |
| − | GSID = <gbrowseImage2>
| |
| − | name=NC_008398:21277094..21284566
| |
| − | source=RiceChromosome05
| |
| − | preset=GeneLocation
| |
| − | </gbrowseImage2>|
| |
| − | CDNA = <cdnaseq>atggcgccagatgagggcgacggctatcgatctacaccagcatacgtcgggttacagatcgaactggcaaccggcggcgctgcgtgcagacaacggttgctaccgatctacatcaacaaatatcgtcgggctacggatcagatcggcgaccggcggcctcacggtgcggtctccgccccggactccgggattgcaccgtggattagggttctgggaggtgtgatggacaaagggggaaagaagaagggggtggacctggaaggcctcttcctaggtcttaagctgtcccgggaggaattgagaggcatgaaaggatcttggtgcttggaggagaaggatggcggaaaagttcaacaggcagtggggaagttattctctccacgagcaggggtgtacaatctgccgttcggcttgatgaatgtggatactggccgggtaattgggaataaaattgggaaagcattggaggttgatacggatgaggatgggtcagccgtgggaggttatctgctggtgaaggtgctcatggatgcccgcaaagccctaatcggcggggtgatgatggagggtgtcgccggtgagaaggagaattggtgtggagtgaagtacgagttcctgccaaatttttgttattcctgcggcgttctgggtcatgtggaggagtgtgatgataaggtatggaaggaggaagagcagcaattcggggactggttgcgagtcctaccgatgaaacagcgggatgtgcgaggctggagctcggaagggggcagttctgggggttcgtttcagcacaggagtgtcgtatcctggaggaaaagtggagttgagaaaggaggtagcagcggtgtaggtggaaaatctgctagccgggatgaccctgaactaagggatgatgctgaaagcccgggtaaagggcatcccaagatccggatgggcggtgctccgaagaagctgacctttgtcggtgatggtagttcggggagtttgactgaggagagagggcataaaaagctgctggagattacggctccctcggagccgcaactagttccgaccacgggtgaagtagctagtgggttagatggagaggacgctcgggggaaggagcacagtaccatgcaggttcctgtggggggaggagtaaaggacaaacacactctcccgttggctgctgaaagtggtactttggatactgggcactcggggacgggagataagaggaaggccactttcaagcggcgtccgcgagtgatggataaggaagtcggcgccaaggagagcgcgattgctgatactcgaaagtgctctgtaacggaggagatggttgtgaccgaagaacggaagaaacagaatgctcaggtggctgtgagtgatgacgcttccaagttcgtggccttctggatatccagagggaggaggatcccgatgttctgtttatttcggagacgaaaaaaggtggaagggggagctcctcggtccgaaagttgtatggccaagtttcgacaggctttggaggactgccagctgcatgatctgggttttgttggggatgccttcacgtggaggaatcaccatcacctggcgtccaactacataaaggaaagacttgatagagcagtggccaatggtgcctggcgagcacgcttcccgcttgttcgcgtaatcaatggggatccgcgccactcagaccatcgttcggtcattgtggaaaccggtgccactgaaaaacaacaatgggggcaacctttggagattatgcagaagtttgaggctcgttggctggaggaagaagaatgccaggccagagtggaggaagcgtgggagaatgcattggaaggtggtcaaactcggctaatggagatccaaagccgggtcctgaaggaattatgggcttgggaccgcactgtcctgggtgagttgaagaagagggttaaaaatctaaggaaggaattggagaagtgcaggagggagccaatctctaaccggcaagttaacagagaacatttgttgcggtacaagttagagcggctgctggatcaacaacatatttactggaagcagcgagcacattctacctggttaaccaagggcgaccggaacacaaagttcttccatgcccaagcatcggagaagaagaaaagaaatacaatacagaagttgcaggatggccacggtggtttggttgctggaaatcaactaaaaagcttcatttcgaaccagtaccaacaactctttaggtcgaatgggtgctctcagatggatgcagtattacaatgtgtccaagcgcgtgtgaccccggagatgagagaaggccttgctgctccttatcagagagaggaagtttgggtggctttgaaggatatgggggatttaaaagcaccaggcgcagatggtattccagcaatcttctacaaaaaatttttgtcactagctggcgataaggtgaaggatgaggtgctggcggttcttaatggtggggatatgccacagggatggaacgatacagttgtggtattaataccaaagacgaaacagccggacacattgaaagacttgagaccgataagtttatgcaatgtggcatataaactgatctccaaggtgatagtcaatcggttgaaagttgtgctgctggaaataatctctccgtcccaaagtgcgtttgtcccgaggaggttgatcacatacaatgtattactggcatatgagctcacacactacttgaatcaaaggaagaaggggaagaatggagtggctgcgatcaagctggacatgagcaaagcttacgatagggtggaatgggatttcctgcgacacatgatgctgaggttgggcttccatgatcagtgggttaacttagtcatgaagtgtgtaacttctgtgacttaccggatcaagatcaatggggagcactcagatcaaatatacccacagagggggctgaggcagggagatccactttccccttacttgttcattatttgtgcggaaggcctttcagcgctattacagaaagcacaagctgatggaaagatagagggtattaaagtttgcagggacacgccaagaataaaccatctctttttcgccgatgattcccttgtcctgatgcgagctggccagaatgatgcgcaagagttgagaagggttcttaacatatacgaagtggcatcaggccaagtcataaacaaggacaaatcatctgtcctcttcagcccaaacacacttcagagtgataggatggaagttagatcagcgctatgtattaatcaggaggcaaaaaatgaaagatatcttggcctgcctgtctctattgggaagtcaaggaggaaagcttttgagtatattaagaggaaggtgtggctccggatccagggttggcaggagaaattactatcaaaagcagggaaggaaatccttgtcaaagctgtggcccaagctattcctacctatgcgatgtcatgttttgatttgactaaagtcttgaaagctaaatatttcctagatggaagcattctgcagtgtgcgccgcgggacgggatatcatatacttggcgcagtatcttgaaaggagtcgatctcatcaaggaaggtctagtgtggcgagtaggaaccggtgaaaatgttaatatttggaatgatccatggatgcccgttggatttacacgccggccgatcactcccagaggcaactcaatcctaacaaaggttgttgaactgatcgatccaggcacgggatggtgggatgagcaattagtcaatgatctgttttggccggaggatgctgctacgattcttgccacgcatgttgatgagaatttggaggactggccgacatggcattttgattcgaagggacttttctcggtcaaatctgcctataaactggcagtgcaaatcagggagaaggaaaaatgcagagatgcatcaggatcttcactgaatacaagtcatgctgacactcttcagtgggagaaaatctggaacatggagggagtgaaggagtgctggaggagtctgaatcttgaagaagtccgactacgcctagtgcaatatcagtctgggaaggaaaccgtaaaggagatcctgtcaatgactgccaaagatcagttaaaagctgttgttctgctgtggaagtggtggtatgccaggaataaggccaatgtgggagacaagaagctcacgagcctagaggtctgtgatgccgtcctttaccatataatggaccttgaaaagctgcaccagtgtcgaactccatgcatgaaggtgaatggaagatgggaacagcctccggccgatatttacaagatgaacagtgatgcatcttttgatgtgagtacgaaaactggcggctggggtttcctcgcacgaggcagcaatggagaattcctagaggggggttacggctatattttgcgggcatctagtccgttgtag</cdnaseq>|
| |
| − | AA = <aaseq>MAPDEGDGYRSTPAYVGLQIELATGGAACRQRLLPIYINKYRRA TDQIGDRRPHGAVSAPDSGIAPWIRVLGGVMDKGGKKKGVDLEGLFLGLKLSREELRG MKGSWCLEEKDGGKVQQAVGKLFSPRAGVYNLPFGLMNVDTGRVIGNKIGKALEVDTD EDGSAVGGYLLVKVLMDARKALIGGVMMEGVAGEKENWCGVKYEFLPNFCYSCGVLGH VEECDDKVWKEEEQQFGDWLRVLPMKQRDVRGWSSEGGSSGGSFQHRSVVSWRKSGVE KGGSSGVGGKSASRDDPELRDDAESPGKGHPKIRMGGAPKKLTFVGDGSSGSLTEERG HKKLLEITAPSEPQLVPTTGEVASGLDGEDARGKEHSTMQVPVGGGVKDKHTLPLAAE SGTLDTGHSGTGDKRKATFKRRPRVMDKEVGAKESAIADTRKCSVTEEMVVTEERKKQ NAQVAVSDDASKFVAFWISRGRRIPMFCLFRRRKKVEGGAPRSESCMAKFRQALEDCQ LHDLGFVGDAFTWRNHHHLASNYIKERLDRAVANGAWRARFPLVRVINGDPRHSDHRS VIVETGATEKQQWGQPLEIMQKFEARWLEEEECQARVEEAWENALEGGQTRLMEIQSR VLKELWAWDRTVLGELKKRVKNLRKELEKCRREPISNRQVNREHLLRYKLERLLDQQH IYWKQRAHSTWLTKGDRNTKFFHAQASEKKKRNTIQKLQDGHGGLVAGNQLKSFISNQ YQQLFRSNGCSQMDAVLQCVQARVTPEMREGLAAPYQREEVWVALKDMGDLKAPGADG IPAIFYKKFLSLAGDKVKDEVLAVLNGGDMPQGWNDTVVVLIPKTKQPDTLKDLRPIS LCNVAYKLISKVIVNRLKVVLLEIISPSQSAFVPRRLITYNVLLAYELTHYLNQRKKG KNGVAAIKLDMSKAYDRVEWDFLRHMMLRLGFHDQWVNLVMKCVTSVTYRIKINGEHS DQIYPQRGLRQGDPLSPYLFIICAEGLSALLQKAQADGKIEGIKVCRDTPRINHLFFA DDSLVLMRAGQNDAQELRRVLNIYEVASGQVINKDKSSVLFSPNTLQSDRMEVRSALC INQEAKNERYLGLPVSIGKSRRKAFEYIKRKVWLRIQGWQEKLLSKAGKEILVKAVAQ AIPTYAMSCFDLTKVLKAKYFLDGSILQCAPRDGISYTWRSILKGVDLIKEGLVWRVG TGENVNIWNDPWMPVGFTRRPITPRGNSILTKVVELIDPGTGWWDEQLVNDLFWPEDA ATILATHVDENLEDWPTWHFDSKGLFSVKSAYKLAVQIREKEKCRDASGSSLNTSHAD TLQWEKIWNMEGVKECWRSLNLEEVRLRLVQYQSGKETVKEILSMTAKDQLKAVVLLW KWWYARNKANVGDKKLTSLEVCDAVLYHIMDLEKLHQCRTPCMKVNGRWEQPPADIYK MNSDASFDVSTKTGGWGFLARGSNGEFLEGGYGYILRASSPL</aaseq>|
| |
| − | DNA = <dnaseqindica>7030..7473#6362..6873#2716..4738#2325..2396#1992..2225#1169..1931#698..924#1..162#atggcgccagatgagggcgacggctatcgatctacaccagcatacgtcgggttacagatcgaactggcaaccggcggcgctgcgtgcagacaacggttgctaccgatctacatcaacaaatatcgtcgggctacggatcagatcggcgaccggcggcctcacgtacactcatcacacggcagcagcatatcaagccgaagctagcagttgcacgttaagccatctccattcagcaaacacatgttgtggcaacatggccgaccaaccagaggacgacacgtcatcaccatgctacagtgccatgcacaaggagtagttggccaatgtgttgactaataagtcccttttttttctatttttttcaatggggtgctgagctgtgattaaattcggttattatccgcgccgatcgtctccaataactcctgattcttttctaatctaatcccgatgcaactgctgtaacgttgagctatccaacgggccagtcttcggttgccaggaggccgcacgacctcctggcgactcggagttagttccgaaccctagttctttgctcgggatttcggattggttttcttgctgatcgttctcagatcgttcctctttcaatcgttctgccacattctgcttccttttccctccttccacatactgctttcaatttcacctgttcgcgctcgttcttccggagtagggtgcggtctccgccccggactccgggattgcaccgtggattagggttctgggaggtgtgatggacaaagggggaaagaagaagggggtggacctggaaggcctcttcctaggtcttaagctgtcccgggaggaattgagaggcatgaaaggatcttggtgcttggaggagaaggatggcggaaaagttcaacaggcagtggggaagttattctctccacgagcagggtatgtcgaaggaatggtgtaggcgttgggcaaaatttggtgtccacagagagggattagggctaaggagttgggagataaccttttcctattctctttcttgcaacgcggggggggggggggggaagagaagagccattacggaaggcccgtgggaattcggaggagatctcatcgtagtggattttgatgagacgaagaggctgaaagaccttgtattcacacatttcccagtgtgggtcagggtgtacaatctgccgttcggcttgatgaatgtggatactggccgggtaattgggaataaaattgggaaagcattggaggttgatacggatgaggatgggtcagccgtgggaggttatctgctggtgaaggtgctcatggatgcccgcaaagccctaatcggcggggtgatgatggagggtgtcgccggtgagaaggagaattggtgtggagtgaagtacgagttcctgccaaatttttgttattcctgcggcgttctgggtcatgtggaggagtgtgatgataaggtatggaaggaggaagagcagcaattcggggactggttgcgagtcctaccgatgaaacagcgggatgtgcgaggctggagctcggaagggggcagttctgggggttcgtttcagcacaggagtgtcgtatcctggaggaaaagtggagttgagaaaggaggtagcagcggtgtaggtggaaaatctgctagccgggatgaccctgaactaagggatgatgctgaaagcccgggtaaagggcatcccaagatccggatgggcggtgctccgaagaagctgacctttgtcggtgatggtagttcggggagtttgactgaggagagagggcataaaaagctgctggagattacggctccctcggagccgcaactagttccgaccacgggtgaagtagctagtgggttagatggagaggacgctcgggggaaggagcacagtaccatgcaggttcctgtggggggaggagtaaaggacaaagtgtgcatgaatgtggatatacagggatcaatctcgttggaaagcaacgtcgggtaacagcacactctcccgttggctgctgaaagtggtactttggatactgggcactcggggacgggagataagaggaaggccactttcaagcggcgtccgcgagtgatggataaggaagtcggcgccaaggagagcgcgattgctgatactcgaaagtgctctgtaacggaggagatggttgtgaccgaagaacggaagaaacagaatgctcaggtggctgtgagtgatgacgcttccaaggtcaattatgatctgcaggcaggattggccggccaatcccgccgagataaatgaagataattgcttggaactgtcggggacttgggaatggctcggcagttcgtggccttctggatatccagagggaggaggatcccgatgttctgtttatttcggagacgaaaaaaggtggtaagtggatggagggtttaagatggtggttggatatgcctaacatgttggcgaaggacagtgagggagctaggggtggtctagctttgttttggaagaagggggtgcaggttgatgtgcagagttttctcgttaccatattgatgccaccatcaaggatgtgcgtgggtttgagtggaggttcacaggaatgtatggggaaccgaggagcgaggagaaagaaaaaacctggcgcctattaaggattctgtgtgatcggagtacccttccctggctatgttgtggggactttaatgaaattttgttcaattgtgagaaggaagggggagctcctcggtccgaaagttgtatggccaagtttcgacaggctttggaggactgccagctgcatgatctgggttttgttggggatgccttcacgtggaggaatcaccatcacctggcgtccaactacataaaggaaagacttgatagagcagtggccaatggtgcctggcgagcacgcttcccgcttgttcgcgtaatcaatggggatccgcgccactcagaccatcgttcggtcattgtggaaaccggtgccactgaaaaacaacaatgggggcaacctttggagattatgcagaagtttgaggctcgttggctggaggaagaagaatgccaggccagagtggaggaagcgtgggagaatgcattggaaggtggtcaaactcggctaatggagatccaaagccgggtcctgaaggaattatgggcttgggaccgcactgtcctgggtgagttgaagaagagggttaaaaatctaaggaaggaattggagaagtgcaggagggagccaatctctaaccggcaagttaacagagaacatttgttgcggtacaagttagagcggctgctggatcaacaacatatttactggaagcagcgagcacattctacctggttaaccaagggcgaccggaacacaaagttcttccatgcccaagcatcggagaagaagaaaagaaatacaatacagaagttgcaggatggccacggtggtttggttgctggaaatcaactaaaaagcttcatttcgaaccagtaccaacaactctttaggtcgaatgggtgctctcagatggatgcagtattacaatgtgtccaagcgcgtgtgaccccggagatgagagaaggccttgctgctccttatcagagagaggaagtttgggtggctttgaaggatatgggggatttaaaagcaccaggcgcagatggtattccagcaatcttctacaaaaaatttttgtcactagctggcgataaggtgaaggatgaggtgctggcggttcttaatggtggggatatgccacagggatggaacgatacagttgtggtattaataccaaagacgaaacagccggacacattgaaagacttgagaccgataagtttatgcaatgtggcatataaactgatctccaaggtgatagtcaatcggttgaaagttgtgctgctggaaataatctctccgtcccaaagtgcgtttgtcccgaggaggttgatcacatacaatgtattactggcatatgagctcacacactacttgaatcaaaggaagaaggggaagaatggagtggctgcgatcaagctggacatgagcaaagcttacgatagggtggaatgggatttcctgcgacacatgatgctgaggttgggcttccatgatcagtgggttaacttagtcatgaagtgtgtaacttctgtgacttaccggatcaagatcaatggggagcactcagatcaaatatacccacagagggggctgaggcagggagatccactttccccttacttgttcattatttgtgcggaaggcctttcagcgctattacagaaagcacaagctgatggaaagatagagggtattaaagtttgcagggacacgccaagaataaaccatctctttttcgccgatgattcccttgtcctgatgcgagctggccagaatgatgcgcaagagttgagaagggttcttaacatatacgaagtggcatcaggccaagtcataaacaaggacaaatcatctgtcctcttcagcccaaacacacttcagagtgataggatggaagttagatcagcgctatgtattaatcaggaggcaaaaaatgaaagatatcttggcctgcctgtctctattgggaagtcaaggaggaaagcttttgagtatattaagaggaaggtgtggctccggatccagggttggcaggagaaattactatcaaaagcagggaaggaaatccttgtcaaagctgtggcccaagctattcctacctatgcgatgtcatgttttgatttgactaaaggtttatgtgatgaaatcaattccatgattagcaagtggtggtggagccagaatgacaaggaaaataaaatacactggctgtcgtgggagaagatgacgctccctaaaaagcttggcgggccaggattccgggatcttcatctgttcaacatggcgatgcttgctcggcaggcatggcggctcctcctaaatgtagactcgctctgtgggcaagtctttgttgacgaaaaaatcgaacacaccggcctgggagatctgcttagctcctgtgcaagtccaaagattgatgagatgcgggcgtgccagtcagtttgatcctgcaactgacaagatatgcaaatagtagatcaaaacagccaatcggctgacaagccgatggagtagttccagccgatagccgataatagccgatgccgatatcagccgatagcgatagggtttaagcaatcggctatatgtccaatgtagataatgatatagaggcaatcggctaatgatgatgtaataaaataacaataaaacccagtataaaccaatcggcaaataatgatatgatagataagcatcgatccgaaggttaaagcacacatcggctggaggtccgatgtcatgaaatccacaagattagattaaacagtgaaacatttgttgtcatcggctaaatccaacttatatgtatatgcaatccttatgagccgatgcaacacccgataactcaccggctgaaatctcgatgaaacccttattggcaatcaagaagcaggctagagattatggttctaagcatgacttagtagatcaaacttaactaatgcagcactaagtatgaaaagaaacataatatctagacaatcaagccgttgactgagttttcagggtggtagatgtctaagctaatctaatctagcaagacgatttagccgataccggcagaaaccctaaaacgagaagcaactgatagagctaaattgatatgctaagactagattaacagagacatgataaataggtaggcaagtatatcatccaaaccagagcaatccaagaggtcgaatgtactgatgcagccttgaacgacgctgacgtagacaatacaatagcctgggcctgcagaacattggacttatcccttcgccggagatcgaagacgatgcagccccgcgtcgggtgccaagttccgccggaacgtaaaaacaaaagtagaaataaaagggtggcgatgcgccgaattgtattgatcgtgaggatagattacatagaccccgggtgtacatatttatacccatgggttgatacaagtccttctcggacaagaaagaaactaacctaaagataaaaggaaaatataaagtccttatcggacactaaacacactttcctaaagataaaaggaaactaacaaactattcctaattaatagataaactgccatgccgcatcctctttaaactcggtcacttagggataagcttcctttagtagattgatttccttaaccgaatatagtaggaatctgactattggcgactttataactcccatcggctgattccgagatgctgcagccgataatgattctaagccgatgatgtttttgccgattaccaaatttcactgttaacagtcttgaaagctaaatatttcctagatggaagcattctgcagtgtgcgccgcgggacgggatatcatatacttggcgcagtatcttgaaaggagtcgatctcatcaaggaaggtctagtgtggcgagtaggaaccggtgaaaatgttaatatttggaatgatccatggatgcccgttggatttacacgccggccgatcactcccagaggcaactcaatcctaacaaaggttgttgaactgatcgatccaggcacgggatggtgggatgagcaattagtcaatgatctgttttggccggaggatgctgctacgattcttgccacgcatgttgatgagaatttggaggactggccgacatggcattttgattcgaagggacttttctcggtcaaatctgcctataaactggcagtgcaaatcagggagaaggaaaaatgcagagatgcatcaggatcttcactgaatacaagtcatgctgacactcttcagtgggagaaaatctggaacatggaggtgccaaataagattaaaatgtttgtttgaagactagctcacaaaagcctgccagttcgatgcaatattcggcgaaggggcatggagtcggacaatttatgtccgatgtgtaatagatttgatgaggactgtgggcatttgtttctgaaatgtaagggagtgaaggagtgctggaggagtctgaatcttgaagaagtccgactacgcctagtgcaatatcagtctgggaaggaaaccgtaaaggagatcctgtcaatgactgccaaagatcagttaaaagctgttgttctgctgtggaagtggtggtatgccaggaataaggccaatgtgggagacaagaagctcacgagcctagaggtctgtgatgccgtcctttaccatataatggaccttgaaaagctgcaccagtgtcgaactccatgcatgaaggtgaatggaagatgggaacagcctccggccgatatttacaagatgaacagtgatgcatcttttgatgtgagtacgaaaactggcggctggggtttcctcgcacgaggcagcaatggagaattcctagaggggggttacggctatattttgcgggcatctagtccgttgtag</dnaseqindica>|
| |
| − | Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001187514.1 RefSeq:Os05g0434000]|
| |
| − | }}
| |
| − | [[Category:Genes]] | |
| − | [[Category:Japonica mRNA]]
| |
| − | [[Category:Oryza Sativa Japonica Group]] | |
| − | [[Category:Japonica Genes]] | |
| − | [[Category:Japonica Chromosome 5]]
| |
| − | [[Category:Chromosome 5]]
| |
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Annotated Information
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Structured Information
