|
|
| Line 20: |
Line 20: |
| | | | |
| | ==Structured Information== | | ==Structured Information== |
| − | {{JaponicaGene|
| + | [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 5]] |
| − | GeneName = Os05g0517200|
| |
| − | Description = HAD-superfamily hydrolase subfamily IIB protein|
| |
| − | Version = NM_001062585.1 GI:115464900 GeneID:4339327|
| |
| − | Length = 4806 bp|
| |
| − | Definition = Oryza sativa Japonica Group Os05g0517200, complete gene.|
| |
| − | Source = Oryza sativa Japonica Group
| |
| − | | |
| − | ORGANISM Oryza sativa Japonica Group
| |
| − | Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
| |
| − | Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
| |
| − | clade; Ehrhartoideae; Oryzeae; Oryza.
| |
| − | |
| |
| − | Chromosome = [[:category:Japonica Chromosome 5|Chromosome 5]]|
| |
| − | AP = Chromosome 5:25702832..25707637|
| |
| − | CDS = 25703004..25705051,25705810..25706083,25706638..25707015|
| |
| − | GCID = <gbrowseImage1>
| |
| − | name=NC_008398:25702832..25707637
| |
| − | source=RiceChromosome05
| |
| − | preset=GeneLocation
| |
| − | </gbrowseImage1>|
| |
| − | GSID = <gbrowseImage2>
| |
| − | name=NC_008398:25702832..25707637
| |
| − | source=RiceChromosome05
| |
| − | preset=GeneLocation
| |
| − | </gbrowseImage2>|
| |
| − | CDNA = <cdnaseq>atgatgtcgaggtcgtacacgaacctgctggacctcgcggcggggaacttcgaggcgctggggccggcggggggagggaggaggaggtcgttcggggcgaagcggatgacgcgggtgatgacggtgcccgggacgctgtcggagctggacgacgaggacgacgagccggcggcgacgagcagcgtcgcctccgacgtgccctcgtcggcggcgtgcgagcgcctcatcgtcgtggcgaaccagctccccgtggtggcgcggcggaggccgggcgccgcggcgggggggtgggcgttctcgtgggacgacgactcgctcctcctccgcctccgcgacggcgtccccgacgagatggaggtgctcttcatcggcacgctccgcgccgacgtgcccgcctgcgagcaggacgaggtgtcgcagagcctcatcgatggattcggatgcgcacccgtgttcctccccgcggggctctacgaccgattctaccagcacttctgcaagggttacctatggccgctgttccactacatgctccccttcgcctccgccttgccggcggccgcatccggcgatggccggtttgaccgcggcgcgtgggaggcctacgtgctcgccaacaaatacttcttcgagaaggtggtcgaggtcatcaacccggaggacgactacgtttgggtccacgattaccacctcatggcgctgcccaccttcctccgccgccgcttcaatcgcctccgcatcgggttcttcctccacagcccctttccctcatcggagatctaccgctcgctgcccgtccgagaggagatcctaagaacgctgcttaattgcgatctcattggattccacacattcgattatgcgaggcacttcctatcttgctgtagtaggatgctggggatagagtaccagtcaaagcgtggatacattggattggattactttggccgcactgttggaatcaagatcatgccagtgggaatccatatgggtcaattgcaatcagtgttgcgattgtccgagaaagaaaagaaggttgctgagctgcggcagcaattcgagggcaagtccgtgttacttggtgtggatgatatggatatcttcaagggaatcaacttaaaacttcttgcgtttgagaatatgctgaggacgcatcccaagtggaagggaagagctgtgttggtgcagattgcaaacccagcacgagggaagggaaaggatctggaggctgtccaggctgagattcgggagagttgtgatagaattaacaaggagtttggccagtcaggttacagtccagtgattttcattgaccagagcgtgccaagtgcggtgaggcttgcatattatacggttgctgagtgtgttgtggtgacggctgtgagggatgggatgaatttgaccccatatgaatacattgtctgccgggaggggatacctggctctgagtgtgcaccagaggtgagtggaccaaagaagagcatgttggttgtgtcggagtttattggttgctcaccttcactgagtggagccattcgtgttaacccgtggaatatcgaggcaactgcagaggcactgaatgaggccatctcaatgtcagagcgtgaaaagcagctgaggcacgaaaaacattaccgttatgtcagcacccatgatgttgcatattggtctaagagctttgtacaggacctggagagggcttgcaaggatcactttaggaaaccatgctggggcattggattgggatttggcttcagggtggtagccctagacccacatttcacaaagcttaatttcgattcaattataatgtcctatgagagatcaaagagtagggctatatttctcgactatgatggcacattggtgccacaggcttcgctcaacaagaatccaagtgaagaattactgaggatcattaataccctatgcgcagatagaaataacaccgtgttcattgtcagcgggagaagcaaggatgacttgagcaaaaagcttatctcatgtccaaagctaggcattgccgcagagcatggctacttcttaaggtggactagagatgaagaatggcaaaccactgcacagacctcagattttggatggatgcaaatggcgaagccagtgatggatctttatactgaatcaactgacggatccaccattgagactaaagaaactgcactggtgtggcaccatcaggatgctgaccaaggttttggctcttcccaggcaaaggaaatgcttgatcacttggaaagtgtattagcaaatgaaccagtctcagtcaagagtggccaattcattgttgaagtcaaacctcagggtgttaccaaagggctcatagctgagaaagtactcacatcaatgaaggagaaggggcaactggcagattttgtattatgcattggtgatgacaggtcagatgaggatatgtttgaaaatattgccgatgtcatgaaaaggagcattgttgcaccaaaaactccactgtttgcatgtactgtgggccagaagccaagcaaagctaggttttacctggatgatacatttgaagtcgtcaccatgttgagttcactggcggatgcttcagaaccagaccttatggcagacttggaagatgacttggccacatcagtctcatcaatagaaataagtgacagagtggtatcttttagtaatttaaggacagaaggatcttag</cdnaseq>|
| |
| − | AA = <aaseq>MMSRSYTNLLDLAAGNFEALGPAGGGRRRSFGAKRMTRVMTVPG TLSELDDEDDEPAATSSVASDVPSSAACERLIVVANQLPVVARRRPGAAAGGWAFSWD DDSLLLRLRDGVPDEMEVLFIGTLRADVPACEQDEVSQSLIDGFGCAPVFLPAGLYDR FYQHFCKGYLWPLFHYMLPFASALPAAASGDGRFDRGAWEAYVLANKYFFEKVVEVIN PEDDYVWVHDYHLMALPTFLRRRFNRLRIGFFLHSPFPSSEIYRSLPVREEILRTLLN CDLIGFHTFDYARHFLSCCSRMLGIEYQSKRGYIGLDYFGRTVGIKIMPVGIHMGQLQ SVLRLSEKEKKVAELRQQFEGKSVLLGVDDMDIFKGINLKLLAFENMLRTHPKWKGRA VLVQIANPARGKGKDLEAVQAEIRESCDRINKEFGQSGYSPVIFIDQSVPSAVRLAYY TVAECVVVTAVRDGMNLTPYEYIVCREGIPGSECAPEVSGPKKSMLVVSEFIGCSPSL SGAIRVNPWNIEATAEALNEAISMSEREKQLRHEKHYRYVSTHDVAYWSKSFVQDLER ACKDHFRKPCWGIGLGFGFRVVALDPHFTKLNFDSIIMSYERSKSRAIFLDYDGTLVP QASLNKNPSEELLRIINTLCADRNNTVFIVSGRSKDDLSKKLISCPKLGIAAEHGYFL RWTRDEEWQTTAQTSDFGWMQMAKPVMDLYTESTDGSTIETKETALVWHHQDADQGFG SSQAKEMLDHLESVLANEPVSVKSGQFIVEVKPQGVTKGLIAEKVLTSMKEKGQLADF VLCIGDDRSDEDMFENIADVMKRSIVAPKTPLFACTVGQKPSKARFYLDDTFEVVTML SSLADASEPDLMADLEDDLATSVSSIEISDRVVSFSNLRTEGS</aaseq>|
| |
| − | DNA = <dnaseqindica>173..2220#2979..3252#3807..4184#gggctcgtcttcctcgccgctcgctcgctcgcctcctccattttttttttcttctcttcttcttacgaactcgaaacgcgaaaaagggagtagatcagatcaaagacgcggaggaggaggaggaggaggagagctagggtttggatcgggagagagggctagggtttcagccatgatgtcgaggtcgtacacgaacctgctggacctcgcggcggggaacttcgaggcgctggggccggcggggggagggaggaggaggtcgttcggggcgaagcggatgacgcgggtgatgacggtgcccgggacgctgtcggagctggacgacgaggacgacgagccggcggcgacgagcagcgtcgcctccgacgtgccctcgtcggcggcgtgcgagcgcctcatcgtcgtggcgaaccagctccccgtggtggcgcggcggaggccgggcgccgcggcgggggggtgggcgttctcgtgggacgacgactcgctcctcctccgcctccgcgacggcgtccccgacgagatggaggtgctcttcatcggcacgctccgcgccgacgtgcccgcctgcgagcaggacgaggtgtcgcagagcctcatcgatggattcggatgcgcacccgtgttcctccccgcggggctctacgaccgattctaccagcacttctgcaagggttacctatggccgctgttccactacatgctccccttcgcctccgccttgccggcggccgcatccggcgatggccggtttgaccgcggcgcgtgggaggcctacgtgctcgccaacaaatacttcttcgagaaggtggtcgaggtcatcaacccggaggacgactacgtttgggtccacgattaccacctcatggcgctgcccaccttcctccgccgccgcttcaatcgcctccgcatcgggttcttcctccacagcccctttccctcatcggagatctaccgctcgctgcccgtccgagaggagatcctaagaacgctgcttaattgcgatctcattggattccacacattcgattatgcgaggcacttcctatcttgctgtagtaggatgctggggatagagtaccagtcaaagcgtggatacattggattggattactttggccgcactgttggaatcaagatcatgccagtgggaatccatatgggtcaattgcaatcagtgttgcgattgtccgagaaagaaaagaaggttgctgagctgcggcagcaattcgagggcaagtccgtgttacttggtgtggatgatatggatatcttcaagggaatcaacttaaaacttcttgcgtttgagaatatgctgaggacgcatcccaagtggaagggaagagctgtgttggtgcagattgcaaacccagcacgagggaagggaaaggatctggaggctgtccaggctgagattcgggagagttgtgatagaattaacaaggagtttggccagtcaggttacagtccagtgattttcattgaccagagcgtgccaagtgcggtgaggcttgcatattatacggttgctgagtgtgttgtggtgacggctgtgagggatgggatgaatttgaccccatatgaatacattgtctgccgggaggggatacctggctctgagtgtgcaccagaggtgagtggaccaaagaagagcatgttggttgtgtcggagtttattggttgctcaccttcactgagtggagccattcgtgttaacccgtggaatatcgaggcaactgcagaggcactgaatgaggccatctcaatgtcagagcgtgaaaagcagctgaggcacgaaaaacattaccgttatgtcagcacccatgatgttgcatattggtctaagagctttgtacaggacctggagagggcttgcaaggatcactttaggaaaccatgctggggcattggattgggatttggcttcagggtggtagccctagacccacatttcacaaagcttaatttcgattcaattataatgtcctatgagagatcaaagagtagggctatatttctcgactatgatggcacattggtgccacaggcttcgctcaacaagaatccaagtgaagaattactgaggatcattaataccctatgcgcagatagaaataacaccgtgttcattgtcagcgggagaagcaaggatgacttgagcaaaaagcttatctcatgtccaaagctaggcattgccgcagagcatggctacttcttaaggtacaattccttaaccgtagtcagctttcttttcattgccagtacaatctgcacttttttcctaaaatagaatctgcactttaccatatatactagaaagtcttgcattatgcactagcataaagcgtgccacatgcaccttttcaaaatacgattctgagctaataacaatttatgttatcagaatggagggcattttatctttagaacttgcgtagcagatcctgatcttacttttatgtaaaagtccatggcatcagcaaatatttataggtgcttcttaactgttaatttgggcttgtgtttttattactccctctgtcccaaaatatagcaacctagtactccctctgtcccaaaatataacaacttttaactctcaggatttgtcctgaaatataacaacttctacaccaacattctcttcctaaccaatcacaaccctccaccattcacttttcccacctacctccattactcatccaatcacaaccctccatcattcacttctacctactttcttaataaccgtgtccaactctaaaacttcttatattctgggatggagggagtactagattagacacaacctagtagagtttagattcctactataggttgtgtttaatttagtacttggttgctaaattttgggacagggagtagccaaggacattgatgataagtgaagtcccatctgattccctcttgaaattacgaaaaaaacggatgatggaatgatttctttcaatatgtaggtggactagagatgaagaatggcaaaccactgcacagacctcagattttggatggatgcaaatggcgaagccagtgatggatctttatactgaatcaactgacggatccaccattgagactaaagaaactgcactggtgtggcaccatcaggatgctgaccaaggttttggctcttcccaggcaaaggaaatgcttgatcacttggaaagtgtattagcaaatgaaccagtctcagtcaagagtggccaattcattgttgaagtcaaacctcaggtacattatcttgatctcttacattcctttcacaagtacattgttattctgatcatgaaaccacatatttttgtgccttttgtggagaacagtttctgtaccaaataacctgactatttaattctcatttatatgatgctcctcgagatccagctaattcttttgcatcaatcgtacaaaccgttttttttttccattacggtatagagctacagggtgatcatgatggatgcagatatgttggcttcacattttctttaccctgttgttatgccttttcaatttcagttcaccttgcattctggtgtagacttattgttggacaaaatgcaagatatctgatatcataactaaaacaatgctgttttatattgtctccatgtttaaaacagaatttgtgaattgcaatggaacacttcctatgttggcctttatggtttaatgctatacatgtcacttaacagtttaacttcacctgctccaggcttttcatttgtaatatatgcattggtgtgcattcctcatttattccttcaaactcctttgtgctgcagggtgttaccaaagggctcatagctgagaaagtactcacatcaatgaaggagaaggggcaactggcagattttgtattatgcattggtgatgacaggtcagatgaggatatgtttgaaaatattgccgatgtcatgaaaaggagcattgttgcaccaaaaactccactgtttgcatgtactgtgggccagaagccaagcaaagctaggttttacctggatgatacatttgaagtcgtcaccatgttgagttcactggcggatgcttcagaaccagaccttatggcagacttggaagatgacttggccacatcagtctcatcaatagaaataagtgacagagtggtatcttttagtaatttaaggacagaaggatcttagtctggtgtttctgcgttgcttttctcgccgaaaaagttctgttggaactgagtgagggagtgttaagcaagatgaaacactgcaagattaaagatgctacagggcaaggaagtcgaattcttgggttcatgattcattttggtgaagatgagggtaagggattaaaacatgtagctgcaaatattctgaagtccggaaagagattacagtttgagtagctcccaaatagcctcattatgcgttttgttacggcggcatttactaccagtcgctgctacgaagattcttatgttcatagctgacctgccatgttctttccatttgaatacttatcccaaggctaagtaggaagcatcggcgtggcagaagtgcatcggtgcaatatgggggaatatgagggtaaatcttgtgacaggttaactgcagcttgtgatttcttgcttgttaacctggttaacagaaatcgtctagtagggaaaaaactagtgatgcttttcgtttacttgtaatgttgtggcaatgtggaggatgacatttgattcattgtttgacagcattatctgtatcatccttatatgtagctaatttatattgagttctttacaattaatcaccacttgct</dnaseqindica>|
| |
| − | Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001062585.1 RefSeq:Os05g0517200]|
| |
| − | }}
| |
| − | [[Category:Genes]] | |
| − | [[Category:Japonica mRNA]]
| |
| − | [[Category:Oryza Sativa Japonica Group]] | |
| − | [[Category:Japonica Genes]] | |
| − | [[Category:Japonica Chromosome 5]]
| |
| − | [[Category:Chromosome 5]]
| |
Please input one-sentence summary here.
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
