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| | ==Structured Information== | | ==Structured Information== |
| − | {{JaponicaGene|
| + | [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 5]] |
| − | GeneName = Os05g0542900|
| |
| − | Description = Virulence factor, pectin lyase fold family protein|
| |
| − | Version = NM_001062734.1 GI:115465198 GeneID:4339484|
| |
| − | Length = 2407 bp|
| |
| − | Definition = Oryza sativa Japonica Group Os05g0542900, complete gene.|
| |
| − | Source = Oryza sativa Japonica Group
| |
| − | | |
| − | ORGANISM Oryza sativa Japonica Group
| |
| − | Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
| |
| − | Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
| |
| − | clade; Ehrhartoideae; Oryzeae; Oryza.
| |
| − | |
| |
| − | Chromosome = [[:category:Japonica Chromosome 5|Chromosome 5]]|
| |
| − | AP = Chromosome 5:27004622..27007028|
| |
| − | CDS = 27004647..27004805,27004884..27005015,27005100..27005282,27005378..27005404,27005516..27005723<br>,27005897..27005978,27006131..27006239,27006358..27006477,27006601..27006918<br>|
| |
| − | GCID = <gbrowseImage1>
| |
| − | name=NC_008398:27004622..27007028
| |
| − | source=RiceChromosome05
| |
| − | preset=GeneLocation
| |
| − | </gbrowseImage1>|
| |
| − | GSID = <gbrowseImage2>
| |
| − | name=NC_008398:27004622..27007028
| |
| − | source=RiceChromosome05
| |
| − | preset=GeneLocation
| |
| − | </gbrowseImage2>|
| |
| − | CDNA = <cdnaseq>atgccacctagttcaaggatggcgccgccgccgctcgccggcgtggtggtggtcgccgccgcgctcctgctcctcctgccggaggccgccgagccccgcactctcctctcgctcgacgacttcggcgccgtcggcgacggcgtcgccaacgacacgcaggccttggtggacgcctggagcgccgcctgcgccaccggcgaccacaccttcctccacgtccccgccgccaagtcctacctcgtctggccggtcaccctcgccggaccttgcagggaggagatcaagctcttcatctccggcaacatcgtcgcgccggagagccccgacgagtggccggagggcggcggcggcggcggcgaatggctccacttcgtcggcgtcagcgacctgacgctgagcggcgggggcgtcatcgacggccgtggccaccggtggtgggcccggtcgtgcaaggcaaagcacaacgcgaccgagaattgcactacccaggctgctccaaaggcgctgcacttcgaggattgtcagggtatcagcgtgatggggatcacgctgcagaacagccaggagagccacctgacgttcacccggtgctcgcacgtcaaggccaactacctgaggataacctcgccggaggacagcccggacaccaccggagttcacgtcgtcagctcgcgcaatgttcacatcatggacgactcgatctccacaggtcatgattgtgtctcgattgtgggcaattctacggatgttcgtctaagagccatctcatgtggacctggccatggtatcagtattggaggattaggcgagaaccgaagttaccacagggtagaaaagatcaagatggacaccctgttcatttccaacactgaaaacggcgtacgcgtcaagaccttccagggcggctgcggcaccgcccggaaaatgaagttcggtgacatccttatgaagaacgtcaagaacccgatcgtcatcgatcagcagaactcctcgagcaacgaaattccctgcggatcaaagaacggaagcgcggtgacggtgggggagatcagctacacggacatcaccggcacgtcggcgtcggagcgggcggtgacgttcgcgtgcagcgaggcggcgccgtgcagcaagctgtcgctggagaacgtgaacatcaccatggccggcgggcagaacgcgtccgcctactgccaccacgcgttcgggaagagcgtcggcgtcgtcgtcccggactcgtgcctcgggaaggaggactacctccgccggcaagtccccgcctccgccgccgccgccggcggcggaacgcaggagaagggaggagaagatgacgatcggtga</cdnaseq>|
| |
| − | AA = <aaseq>MPPSSRMAPPPLAGVVVVAAALLLLLPEAAEPRTLLSLDDFGAV GDGVANDTQALVDAWSAACATGDHTFLHVPAAKSYLVWPVTLAGPCREEIKLFISGNI VAPESPDEWPEGGGGGGEWLHFVGVSDLTLSGGGVIDGRGHRWWARSCKAKHNATENC TTQAAPKALHFEDCQGISVMGITLQNSQESHLTFTRCSHVKANYLRITSPEDSPDTTG VHVVSSRNVHIMDDSISTGHDCVSIVGNSTDVRLRAISCGPGHGISIGGLGENRSYHR VEKIKMDTLFISNTENGVRVKTFQGGCGTARKMKFGDILMKNVKNPIVIDQQNSSSNE IPCGSKNGSAVTVGEISYTDITGTSASERAVTFACSEAAPCSKLSLENVNITMAGGQN ASAYCHHAFGKSVGVVVPDSCLGKEDYLRRQVPASAAAAGGGTQEKGGEDDDR</aaseq>|
| |
| − | DNA = <dnaseqindica>26..184#263..394#479..661#757..783#895..1102#1276..1357#1510..1618#1737..1856#1980..2297#agaaagtcgaagctgctgatcttggatgccacctagttcaaggatggcgccgccgccgctcgccggcgtggtggtggtcgccgccgcgctcctgctcctcctgccggaggccgccgagccccgcactctcctctcgctcgacgacttcggcgccgtcggcgacggcgtcgccaacgacacgcaggtgagcagcagctagccactccagcttcactagctcagctcacaatggcgtcttcactctttctgccgcctcgtccaggccttggtggacgcctggagcgccgcctgcgccaccggcgaccacaccttcctccacgtccccgccgccaagtcctacctcgtctggccggtcaccctcgccggaccttgcagggaggagatcaagctcttcgtacgcacacaccaccacacactatctccgcctcttccatttcttgtgccttatccacttcgttaatcgcgtccggttcctcagatctccggcaacatcgtcgcgccggagagccccgacgagtggccggagggcggcggcggcggcggcgaatggctccacttcgtcggcgtcagcgacctgacgctgagcggcgggggcgtcatcgacggccgtggccaccggtggtgggcccggtcgtgcaaggcaaagcacaacgcgaccgaggtaaccaatggtctcctccatgaccatgatgttgccaattgcaacacagaaatatctgaattattctgaagttctgaacaatcttgtctctgcagaattgcactacccaggctgctccaaaggtgagattttcgctttaatttgatcagagatcttggctagctcgagaggatttggaccaaaaagatggagaattcatgcatggattgcattttcgcggtgttaatttgcaggcgctgcacttcgaggattgtcagggtatcagcgtgatggggatcacgctgcagaacagccaggagagccacctgacgttcacccggtgctcgcacgtcaaggccaactacctgaggataacctcgccggaggacagcccggacaccaccggagttcacgtcgtcagctcgcgcaatgttcacatcatggacgactcgatctccacaggtactacacatttttttttcttctgaagaaatggagctttgctctgaatttctgaatgatgtctgttgctgaaacagatgtctcgtttgaaattagttgatcagatatgttttgcaggacagtaaaaaggctcacaaagaacattttcttccccttctttttgcctttttaaggtcatgattgtgtctcgattgtgggcaattctacggatgttcgtctaagagccatctcatgtggacctggccatggtatcaggttagcatttttttctccatcttttcagtggaatttgcatcagattttgaactaaattcagacaatgactccacccaaacacactccacatgaccacatccatttatagtagcagttcgtaacagagctaattaacagtttgtgcttgtcagtattggaggattaggcgagaaccgaagttaccacagggtagaaaagatcaagatggacaccctgttcatttccaacactgaaaacggcgtacgcgtcaagaccttccaggttaaccgtaaacccaacgcccacttctcacatgaatcttcgtcagaaacacccaagattacactgaactctgaactcaaaactgcctagctagctaacttctgctgttgttcttcagggcggctgcggcaccgcccggaaaatgaagttcggtgacatccttatgaagaacgtcaagaacccgatcgtcatcgatcagcagaactcctcgagcaacgaaattccctgcggatcaaaggtacagtgagctcatgatcagcatctgatctgatcagcacatagtagaagatcaacatctctgaacattttgcctaacatctctgaacattgagttttttggggtggattggatggtgtgcagaacggaagcgcggtgacggtgggggagatcagctacacggacatcaccggcacgtcggcgtcggagcgggcggtgacgttcgcgtgcagcgaggcggcgccgtgcagcaagctgtcgctggagaacgtgaacatcaccatggccggcgggcagaacgcgtccgcctactgccaccacgcgttcgggaagagcgtcggcgtcgtcgtcccggactcgtgcctcgggaaggaggactacctccgccggcaagtccccgcctccgccgccgccgccggcggcggaacgcaggagaagggaggagaagatgacgatcggtgaaaccgtggcaggttaagtcagcgtgtgtagtggacgtgttcacatcctttaccataataacgctattattacatgtactaacgtgtgaggataataaaagtttagaaccc</dnaseqindica>|
| |
| − | Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001062734.1 RefSeq:Os05g0542900]|
| |
| − | }}
| |
| − | [[Category:Genes]] | |
| − | [[Category:Japonica mRNA]]
| |
| − | [[Category:Oryza Sativa Japonica Group]] | |
| − | [[Category:Japonica Genes]] | |
| − | [[Category:Japonica Chromosome 5]]
| |
| − | [[Category:Chromosome 5]]
| |
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