Difference between revisions of "Os05g0304400"

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(Created page with "{{JaponicaGene| GeneName = Os05g0304400| Description = Similar to GDP dissociation inhibitor protein OsGDI2| Version = NM_001061677.1 GI:115463084 GeneID:4338357| Length =...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os05g0304400|
 
GeneName = Os05g0304400|

Revision as of 20:07, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os05g0304400

Description

Similar to GDP dissociation inhibitor protein OsGDI2

Version

NM_001061677.1 GI:115463084 GeneID:4338357

Length

4975 bp

Definition

Oryza sativa Japonica Group Os05g0304400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:13693771..13698745

Sequence Coding Region

13693863..13693949,13694335..13694397,13694557..13694640,13695025..13695132,13695286..13695458
,13696458..13696569,13696692..13696772,13696879..13696941,13697032..13697133
,13697331..13697455,13697584..13697794,13697882..13697956,13698218..13698271

Expression

GEO Profiles:Os05g0304400

Genome Context

<gbrowseImage1> name=NC_008398:13693771..13698745 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:13693771..13698745 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatgaggagtacgacgtgatcgtgctggggacgggcctcaaggagtgcatcctcagcggcctcctctccgtcgacggcctcaaggtcttgcacatggataggaatgactactatggaggagattccacctcgctcaaccttaaccagctgtggaagaggtttagaggggaagacaaacccccggctcatctgggctcaagcaaagattacaatgtagatatggtcccaaagtttatgatggcaaatgggacactggttaggaccctcattcacactgatgtgacaaagtatttgtcattcaaagctgtcgatggaagctatgtcttcagcaaagggaagattcacaaggtacctgctactgacatggaggctctgaagtcccctttgatgggtctttttgagaagcgcagagcaaggaacttcttcatttacgtccaagattacaatgaagctgatccaaaaacacatcaagggttggatcttactacaatgacaactagagaactgatagcaaaatatggtttaagtgacgataccgtggatttcatcggtcatgcacttgctcttcatagagatgatcgctaccttaatgaaccagcaattgatactgtaaaaaggatgaaactatatgcagagtcccttgcacgttttcaaggaggctcaccttatatttatccactctatgggctgggtgagctgccacagggttttgctcgtttaagtgctgtttatggtggcacttacatgttaaataagccggactgcaaggttgaatttgatatggaagggaaagtctgtggcgttacttcagaaggtgaaactgcaaaatgcaagaaagttgtttgtgatccttcatacttacctaacaaggttaggaagatagggaaagttgcacgagcaattgctataatgagccacccaattgcaagcacaaatgactctcactcagtccagattattttgccacagaaacaacttggacgcaagtcagacatgtatgtcttctgttgctcatacacacacaatgtcgctccaaaggggaagtttattgcatttgtatctacagaagcggaaactgacaatccacagtccgagctaaagcctggaattgatctacttggtcaagtagatgagctattttttgatatctatgatagatacgaacctgtgaatgaaccatctcttgataattgttttgtctcaactagctatgatgccaccacacattttgagacaacggtgacagatgttcttaacatgtatacattgatcaccggaaaggctgttgatctcagtgttgatttgagtgctgccagtgccgctgaagaatattag</cdnaseq>

Protein Sequence

<aaseq>MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGDST SLNLNQLWKRFRGEDKPPAHLGSSKDYNVDMVPKFMMANGTLVRTLIHTDVTKYLSFK AVDGSYVFSKGKIHKVPATDMEALKSPLMGLFEKRRARNFFIYVQDYNEADPKTHQGL DLTTMTTRELIAKYGLSDDTVDFIGHALALHRDDRYLNEPAIDTVKRMKLYAESLARF QGGSPYIYPLYGLGELPQGFARLSAVYGGTYMLNKPDCKVEFDMEGKVCGVTSEGETA KCKKVVCDPSYLPNKVRKIGKVARAIAIMSHPIASTNDSHSVQIILPQKQLGRKSDMY VFCCSYTHNVAPKGKFIAFVSTEAETDNPQSELKPGIDLLGQVDELFFDIYDRYEPVN EPSLDNCFVSTSYDATTHFETTVTDVLNMYTLITGKAVDLSVDLSAASAAEEY</aaseq>

Gene Sequence

<dnaseqindica>93..179#565..627#787..870#1255..1362#1516..1688#2688..2799#2922..3002#3109..3171#3262..3363#3561..3685#3814..4024#4112..4186#4448..4501#accatcccatccacgcttctcgactcccagacgacgctgctgctgcctttcgtcaaccccccacttctccttccccgccgccgctcgccgccatggatgaggagtacgacgtgatcgtgctggggacgggcctcaaggagtgcatcctcagcggcctcctctccgtcgacggcctcaaggtacctctctcctacccaatccatccgccgcctcccgtgctcggatcggtgctccccatcgtcgtcgatccgtagatcgccccccacttcatctcatctgggcttgacgctgccgcactcggatgagctgctgccattttgatcgctgatttacttagctatgcgagcgtagcgggatggtaatttgtccgtacatcgtggctgggtaggtggtggcgccatggttgtggtggttgctttgcgtttgggggagggatcgtcagtgcgtgcctgagcttacgacttcccttatcccatttaaaagagtagcggcatagcgattttgggggatttcacaacaagatctaactaaacagatcggatgcacttttcaatgtttttgcaggtcttgcacatggataggaatgactactatggaggagattccacctcgctcaaccttaaccaggtaagcaaactgcaatgaacttaatttgaccagtacagggtctatatcttgtcgtcatatcatgtcaaggaatgcttatgttattacagagtacattatttcttttaattttttgtccttgttcactgacattgttttccacttcgctttttggaatagctgtggaagaggtttagaggggaagacaaacccccggctcatctgggctcaagcaaagattacaatgtagatatggtcccaaaggtgcaactgtcactttcccccatcataatctatcttgcttctatatttagtattagcagctaacgtacgtggcagtgaggtaccatataggtggggaacctcaaaaacagaaatcccgtgatggtgcataagttcatcttgatgagaacatttagatccttttatgttacaaatgtggttattcactggtttagaaaactatgtaatctcatgtgtataatactcaaatggaaaaaaaggtctgaaaagtaatgattgtcctgatttttgttgattgtcaattagttggatggtttattacaagcgctaccactatggttccttgagtagtgtattgttgttgcatgattatctaaagttctctctttttttttatctcggcagtttatgatggcaaatgggacactggttaggaccctcattcacactgatgtgacaaagtatttgtcattcaaagctgtcgatggaagctatgtcttcagcaaagggaaggtaacatcttcagctcatttcctctgttttcattagcatcacatttcctctagtgttttatacttttatctaagtggttgttggatctatattctgatcttattcctatgctagcagtgtaacatgcacttttctatttttgctgtcaaccagattcacaaggtacctgctactgacatggaggctctgaagtcccctttgatgggtctttttgagaagcgcagagcaaggaacttcttcatttacgtccaagattacaatgaagctgatccaaaaacacatcaagggttggatcttactacaatgacaactagagaactgatagcgtgagtacactagtgtttcttgcactgtattcaaccctttctcagtagtgcatggcttccttttctaaatgaaacaatagatttggggcatatatactatatttatatgggatatattgttgtagacttatacatgccctaatgcatacgtgaaatgtcaaacataatgacagtgtgcgggcaccggcgcatacatgaaaccacgtaatatgaaaaaaagaaaatgtgcacttcatagcaaagagaacatccattgtatcatctgtccattgtgtagaactttagaaagggtacgatagacagacttttgcatggaatccatatgtggcacatggcagtctttacatgcgtagcaacaccctaaaacttactggtcactaatgattgctaaatttaggataactgttgatatgactgaaagatttctctggataaaattaccttggtattagaaaccagcgtacttaaatttattttttcgatctgacacgggagtacttaagatacggatgcagttacattattgaaccaagcaacacatttatgttatatgctgcatgctgtggtactgcattacaagcctactttgtgctgctcatgaaatgtagaaaccttgatatcccttttagggaaaataaagtatgaaagcagaggcatcagagcatgggttgggtatctagtgtgtcacatcaatgagattctcactgcaaaattttaatttgcgttatttttaatttgttgtgtcttgactaatgtggacccacttaaatatagattagcttctattgtaacttgtaagaagacttacatcctgatggatattcttgtcgtcttctagtagttgtgttctgacaaaaaagtagtacaaataattgccgccacagaatatatcatcaatttaccttcagtctttcacatgatgcaaaaggatatatctatgcttcttttaccttttctgcatataaataactctgtttccatttgccctttcttttccagaaaatatggtttaagtgacgataccgtggatttcatcggtcatgcacttgctcttcatagagatgatcgctaccttaatgaaccagcaattgatactgtaaaaaggatgaaagtaagtattgatcaaagctcctgtagattgttcgtagtcttctgctacggatatcctgctgttctctgaatattcatgctttatgaagttcaattacattttagtgctttatctacttgtagctatatgcagagtcccttgcacgttttcaaggaggctcaccttatatttatccactctatgggctgggtgagctgccacaggttagtgaaattttaatgttaagtaaatacctgtcatactgcatgtgcatgtttttaagatggtcatatataacgctttcttattcaaatatttcttattccacagggttttgctcgtttaagtgctgtttatggtggcacttacatgttaaataagccggactgcaaggtgtgattaccatcaaccctgtcattacttgcatctctggatgaccagacaacctaataaaactttttggcatgccatacatgatcttaggttgaatttgatatggaagggaaagtctgtggcgttacttcagaaggtgaaactgcaaaatgcaagaaagttgtttgtgatccttcatacttacctaacaaggttaattttctttcctgtattcaatttatttaccacatgaattttctttcagtatgttcatttaggattcctagatgatgtacttccatcttaacacattcacagcaaatttactattttttcttcttcccttccatttgttgagaagttttattaactacaaccacatttgatgttctgtatacatttattaacaggttaggaagatagggaaagttgcacgagcaattgctataatgagccacccaattgcaagcacaaatgactctcactcagtccagattattttgccacagaaacaacttggacgcaagtcagacatgtgaggcctttctcaatcacaaacaaatactgctcaccttatgaattattacatttgcttgcccattgcttttaacaaagtttatttattcccattttgtaacatttttattggtattctcctgttaggtatgtcttctgttgctcatacacacacaatgtcgctccaaaggggaagtttattgcatttgtatctacagaagcggaaactgacaatccacagtccgagctaaagcctggaattgatctacttggtcaagtagatgagctattttttgatatctatgatagatacgaacctgtgaatgaaccatctcttgataattgttttgtctcaactgtaagttttgcaatatctgatttttgaaatgagcattaagtttgattgtctagactgtaacatatttctggtccacactccctgcagagctatgatgccaccacacattttgagacaacggtgacagatgttcttaacatgtatacattgatcaccggaaaggtagatgtgcttccgcctttcattttctttaatctttaatacatgtaatgcttctatattttgtttgaaacacctttttttggaaaggatgaaaattagccgggaggctatagagaggactagagtaccacatatgttgtaatagcttgacttttgtgtcaccttaaattctaaatccaaatccattctgttggctattgtttgttttacaattatgtattctacccttttcctaattcttttctcattgcactattgcaggctgttgatctcagtgttgatttgagtgctgccagtgccgctgaagaatattagatttcacaaccaaagctcaatcatttcacaaagatatgctttttcttggtgggtaccgcaggacagatcgtaacgagtgactggtatagttattcaaactccacgttataccgagtgttctggccaatatggcttgttgctagcagtaatatgcacaactgttggccaagatgactgaaatgatggtggtttaatttgatacttcagtaatgcaatggtgtaaacagtgtacacactacacaatgacggtcgggcgttttgtgactgatgtatcataactgctggataattttgcatgtctacttctgcagtgttgtgttctttaccttgcattttcaggtttcagttgggtgtgcctgcctccggtatcagccggtagggtagcatgagtagattttaccgagtcatgcgaatgaaaattataatttaacagcttaacctacccagaatatcttattcctggttggattaacc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0304400, RefSeq:Os05g0304400