Difference between revisions of "Os05g0582100"

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==Structured Information==
 
==Structured Information==
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{{JaponicaGene|
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    [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 5]]
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GeneName = Os05g0582100|
 
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Description = Cas1p-like family protein|
 
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Version = NM_001062971.2 GI:297604973 GeneID:4339732|
 
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Length = 4657 bp|
 
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Definition = Oryza sativa Japonica Group Os05g0582100, complete gene.|
 
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Source = Oryza sativa Japonica Group
 
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  ORGANISM  Oryza sativa Japonica Group
 
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            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
 
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            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
 
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            clade; Ehrhartoideae; Oryzeae; Oryza.
 
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|
 
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Chromosome = [[:category:Japonica Chromosome 5|Chromosome 5]]|
 
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AP = Chromosome 5:29041810..29046466|
 
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CDS = 29042320..29042478,29042559..29042655,29043122..29043178,29043259..29043321,29043439..29043527<br>,29043685..29043771,29043947..29044068,29044151..29044406,29044501..29044650<br>,29045026..29045184,29045726..29045798,29045874..29045930,29046021..29046149<br>,29046375..29046466|
 
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GCID = <gbrowseImage1>
 
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name=NC_008398:29041810..29046466
 
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source=RiceChromosome05
 
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preset=GeneLocation
 
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</gbrowseImage1>|
 
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GSID = <gbrowseImage2>
 
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name=NC_008398:29041810..29046466
 
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source=RiceChromosome05
 
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preset=GeneLocation
 
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</gbrowseImage2>|
 
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CDNA = <cdnaseq>gtttcgtttttgctgggtcttttccctgtcctcattggatggatctacgccgaaatcttagaatacaggaaatctttgttgtatgggaaagttcactcggatgctaatttggagaatgagactatgaaggaagatgataaggctgtattacttgaaggagggcagtcaaaatcgccatctacaaagctccgaaacatgtctacaaaagcaaatttaatacggtttataacaatggacgagtcttttctgcttgaaaaccgtgctgtgctaagagcaatggccgaagtgggcattattctggtctacttttacatttgtgaccggacaaatatatttccagaaactaagaagagctacaaccgcgacctgtttctgtttctgtacattcttcttatcatagcatcggcacttacttcacttaagaagcacaatgaaaaatcagctttcactggaaagtcaatactctatcttaatcgtcaccaaactgaggaatggaaagggtggatgcaggtcttgtttctgatgtaccactatttcgctgccacagaaatatacaatgcaattcgggtgttcattgctgcctatgtctggatgactggattcgggaatttctcatattattatatcaagaaagattttagcattgcaagatttgcacagatgatgtggaggctaaatttctttgtggccttctgttgcattgtccttgacaatgattacatgctgtattatatatgtccaatgcacacactttttactctgatggtatacggatcacttggtctgttcaacaagtacaatgagaaaccatctgtcatggctattaagattgcttgctgcttcttgactgtcattttgatatgggaaattcctggggtatttgaatttttatgggccccctttacatttcttctaggatataaggatccagagccttccaaggcaaacttacccctgctacatgagtggcatttccgatctggccttgatcgatacatatggattattggaatgatctatgcttacttccaccctaatgttgaacgttggatggagaagttggaggaatctgagactaaggttagactgtttatcaagggagccattgtcactctttctttgacggctggttacctatggtatgaatatatctacaggctagacaaaattacatacaacaagtaccatccctacacgtcatggattcctatcactgtttatatctgcctacgcaactgcacccagcagttgaggagtgcctccttggctcttttcgcctggcttggcaagatcacactagagacatacatttcccagattcacatttggctcaggtctagcacgccaaatgggcagccaaaatggctcctatcttttgtaccagattatccattgcttaacttcatgcttactacagcaatctatcttcttctatcataccgggtgtttgagatcacaggtgtactgaagggagcttttattcccagtagagacaacaatcggctatatcaaaattttattgcagggattgccatatctgcatgcctgtatttctgctcacttattcttgtgaaaattactattgtatag</cdnaseq>|
 
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AA = <aaseq>VSFLLGLFPVLIGWIYAEILEYRKSLLYGKVHSDANLENETMKE                    DDKAVLLEGGQSKSPSTKLRNMSTKANLIRFITMDESFLLENRAVLRAMAEVGIILVY                    FYICDRTNIFPETKKSYNRDLFLFLYILLIIASALTSLKKHNEKSAFTGKSILYLNRH                    QTEEWKGWMQVLFLMYHYFAATEIYNAIRVFIAAYVWMTGFGNFSYYYIKKDFSIARF                    AQMMWRLNFFVAFCCIVLDNDYMLYYICPMHTLFTLMVYGSLGLFNKYNEKPSVMAIK                    IACCFLTVILIWEIPGVFEFLWAPFTFLLGYKDPEPSKANLPLLHEWHFRSGLDRYIW                    IIGMIYAYFHPNVERWMEKLEESETKVRLFIKGAIVTLSLTAGYLWYEYIYRLDKITY                    NKYHPYTSWIPITVYICLRNCTQQLRSASLALFAWLGKITLETYISQIHIWLRSSTPN                    GQPKWLLSFVPDYPLLNFMLTTAIYLLLSYRVFEITGVLKGAFIPSRDNNRLYQNFIA                    GIAISACLYFCSLILVKITIV</aaseq>|
 
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DNA = <dnaseqindica>3989..4147#3812..3908#3289..3345#3146..3208#2940..3028#2696..2782#2399..2520#2061..2316#1817..1966#1283..1441#669..741#537..593#318..446#1..92#gtttcgtttttgctgggtcttttccctgtcctcattggatggatctacgccgaaatcttagaatacaggaaatctttgttgtatgggaaagtgtaagatttctttctgaatactataattttatttagctttaggaacttagagttggttgttgatatgcatatattcgaagtcaactgcccaccattgctcctaataattgaatcatgtaaccagagttttcgtgatgaaactggcatgacatatcttacttcatgcaaatgttgaaaaatccatggtctaatctcctcctatccgggcattcttttcatctgcagtcactcggatgctaatttggagaatgagactatgaaggaagatgataaggctgtattacttgaaggagggcagtcaaaatcgccatctacaaagctccgaaacatgtctacaaaagcaaatttaatacggtactgtttgaatgcataatgcacagtttttaggattttagcaaattctattgcagttaagtgatgtctcgatgtggctgtgagttgcaggtttataacaatggacgagtcttttctgcttgaaaaccgtgctgtgctaagagcaatgtaagactattcagagctaattttttccactctagaatttcgtgctaagacgcacaccctttaactttcttgcagggccgaagtgggcattattctggtctacttttacatttgtgaccggacaaatatatttccagaaactaagaaggtaaccatattgctccttttcttactcttgacactctcaatgatgtactatatggagtagatgtaaactgcaacatgtagcttttggctaaattgtaactgtagcttgttccacatccctggggatagttcttactgttttttataatctaccatatcttgtttcttaattgttcttcctgcaattaattcttgcaagttatagggacttttctgccttagtttcagtgtaggcttatctctaaaacaagatagagaccgtgagttagggctaagtaggtgacatatctgttccttatctagttatctgactggcttaagctttctgccatctcatacagacagaactcatagccaatggatgtgagcatgtggcttgtagaaaggggataggttataagtcggggatcggggtcttgttggccaacttttctcgttgatctaataagctagaatttagggatttacctcaattaggccaaaaaagcattatatgatgttcatttctgcagtatatagtaatctttgtgttgttttgacagagctacaaccgcgacctgtttctgtttctgtacattcttcttatcatagcatcggcacttacttcacttaagaagcacaatgaaaaatcagctttcactggaaagtcaatactctatcttaatcgtcaccaaactgaggaatggaaagggtggatgcaggttagtgactttacttcactgcttctgttcttttagtaaatgtgatttcagttatttctgtactgagtttttatagcgcatggttatcatccttcctgttttgtacacgcaagcaatgtactttgatgtttgttcaccaggcattgagttagaaaaaaaaactctgggtattcttatccaaatcgtgctctcagttttatgtcatgcactgtttttatttggacaagccctatgttacagccatttcatgcctcagaaatttccaactactgtcgtagcacttttatattctttctcgctgttgtattatgcaatccttttagtacttgtatgttggctttaagtgtgctataattattttatctgcctttccaggtcttgtttctgatgtaccactatttcgctgccacagaaatatacaatgcaattcgggtgttcattgctgcctatgtctggatgactggattcgggaatttctcatattattatatcaagaaagattttagcattgcaagatttgcacaggtttccatcctagcccaattatccaatgttgtttcttaccccttgatttgttgtaaccatcttagaaatactaaagaccatcttttaaatgcagatgatgtggaggctaaatttctttgtggccttctgttgcattgtccttgacaatgattacatgctgtattatatatgtccaatgcacacactttttactctgatggtatacggatcacttggtctgttcaacaagtacaatgagaaaccatctgtcatggctattaagattgcttgctgcttcttgactgtcattttgatatgggaaattcctggggtatttgaatttttatgggccccctttacatttcttctaggtgagttatgcatgttttctgtcttagcattattctcattaaccatggataggattttacaccattttcctttcatgtacaggatataaggatccagagccttccaaggcaaacttacccctgctacatgagtggcatttccgatctggccttgatcgatacatatggattattggaatgatctatgcttacttccaccctaatgtaagtaattcggttatggatccacatttcctccctttggaactgcatgagtgagcagtacatataccgtgttcctttcatacatttcttcctagggagttctctcttattttaagaatatgttccttgtttatactatatattaatgtagcatggaatccgctatctgaaataggttgaacgttggatggagaagttggaggaatctgagactaaggttagactgtttatcaagggagccattgtcactctttctttgacggtaagttgcatccatcttttaccaatgcacagactttctatattgtcaagatgacatacttgtttgctttaccaactagatttgcttttgttttaaaccatgatgctgtattgatttcaaatgctgtactaactaggacttctgttcctcattttaggctggttacctatggtatgaatatatctacaggctagacaaaattacatacaacaagtaccatccctacacgtcatggattcctatcacgtacgtataaaaaacactaccatgattatatggcatgtggtaaattgtttctttaattgaatagacactttcagcaaaaagaaaacattgaattgacacaacaccgttgttttacagtgtttatatctgcctacgcaactgcacccagcagttgaggagtgcctccttggctcttttcgcgtaagcacctaatataatgatgtttctttttctttattggctttattttttactaagattttaacctgttttttcaatagctggcttggcaagatcacactagagacatacatttcccagattcacatttggctcaggtatggtatcaatttttttcagcatgtgttactgttgttttaattacttaatgcatgaccgttcaaaaaaaaaatttacgcatgaccagtccagtaatcagctctgcatctgatgtcaaatgtatgaacagaactacgaatgaaaataaacaagcaatttgacgggttgtgtattcagctgcgttgacttaacctacttggtgtaacacctacagctatcataagaactatgatagatttagatttattgatgctaacattgaaaatatattttctactttcaaagagaattcggaattcaaattcaagaaaaacacaagaaatgaagatttctggattagaatacatgtcaaaatttctttctaatatgaaatacgtctaggatttgttggcattgtccactctattgtgtccagtgtttttaattttaagaactggaaccacggtgctgattcttattttacaggtctagcacgccaaatgggcagccaaaatggctcctatcttttgtaccagattatccattgcttaacttcatgcttactacagcaatctatcttcttgtaagtgaacctgcccagggtgcattttcattcaaaaattataatcatcgaagttattaattccatgatgtatactgcagctatcataccgggtgtttgagatcacaggtgtactgaagggagcttttattcccagtagagacaacaatcggctatatcaaaattttattgcagggattgccatatctgcatgcctgtatttctgctcacttattcttgtgaaaattactattgtataggtaaacagctggaacctactatagatacttacggctttcacatagtctgtctctatatatcccagtttcctcagtattggttccacgtgattacaggtagaattgccaagtaaatgaccttgatagaaggtcgttcctgaaaattgtgtgcttggtatctggtggtaagatattcagctcaggcctcaattccattttgcatttggaggtaaagatacagttcccatgaaggacctgccgatcttctagttgggaattgaattgccagaggatgtaggtatagaagtcaaattttgatttatcatttcccccatttaaaacactgtacacagttagcgaagttgtgcattctttgggagttgtagatgctttcctaagttgatacaacagtgtaagaatttcctcccctcaaagcactgtaacatgtggtgtactatacagaatgatactacaaggaagggtttcccttttgtaaaacgaaatataaagggcaagccccaatctttcttt</dnaseqindica>|
 
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Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001062971.2 RefSeq:Os05g0582100]|
 
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}}
 
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[[Category:Genes]]
 
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[[Category:Japonica mRNA]]
 
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[[Category:Oryza Sativa Japonica Group]]
 
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[[Category:Japonica Genes]]
 
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[[Category:Japonica Chromosome 5]]
 
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[[Category:Chromosome 5]]
 

Latest revision as of 08:39, 14 May 2015

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Structured Information