|
|
| Line 20: |
Line 20: |
| | | | |
| | ==Structured Information== | | ==Structured Information== |
| − | {{JaponicaGene|
| + | [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 5]] |
| − | GeneName = Os05g0583500|
| |
| − | Description = PX-associated domain containing protein|
| |
| − | Version = NM_001062982.1 GI:115465694 GeneID:4339743|
| |
| − | Length = 7761 bp|
| |
| − | Definition = Oryza sativa Japonica Group Os05g0583500, complete gene.|
| |
| − | Source = Oryza sativa Japonica Group
| |
| − | | |
| − | ORGANISM Oryza sativa Japonica Group
| |
| − | Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
| |
| − | Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
| |
| − | clade; Ehrhartoideae; Oryzeae; Oryza.
| |
| − | |
| |
| − | Chromosome = [[:category:Japonica Chromosome 5|Chromosome 5]]|
| |
| − | AP = Chromosome 5:29094525..29102285|
| |
| − | CDS = 29094963..29095091,29095844..29095926,29096150..29096309,29096560..29096695,29096807..29096886<br>,29097086..29097459,29097553..29097598,29097685..29097753,29098194..29098338<br>,29098456..29098556,29098634..29099879,29099955..29100094,29100535..29100712<br>,29100811..29101216,29101995..29102112|
| |
| − | GCID = <gbrowseImage1>
| |
| − | name=NC_008398:29094525..29102285
| |
| − | source=RiceChromosome05
| |
| − | preset=GeneLocation
| |
| − | </gbrowseImage1>|
| |
| − | GSID = <gbrowseImage2>
| |
| − | name=NC_008398:29094525..29102285
| |
| − | source=RiceChromosome05
| |
| − | preset=GeneLocation
| |
| − | </gbrowseImage2>|
| |
| − | CDNA = <cdnaseq>atggcgacggcaggcggcccggggagggcgcacacggtccgcgacctcgcggaggaggggaagaagcgggccgtgctgctcctcgtcttcgccttcggcctcgccttcctcatgtccctgacaagctcctcagtttggattaacttgccatttgccacagctttgattgttttatttcgctacatatcacttgactatgatttccgtagaaagagcacaactaccacagataacgatgccagtcgcgcacttaccaaaacaaaaagtattgaaccaaataaaatcccctctattcaaaaggatggaaagtcagattggaagagcaaggtgaattcccctccagttgaagctgcaattgaacagttcacaaggcaccttgtcacagagtgggtaacagatctatggtactcccgtgtaacacctgacaaggaaggtccagaggaactcatcaatatagttaataatgtcctgggagagatatcagtccgggcaagaaacgttaaccttatcgctctgctaaccagggatctgattgatcttatatgcaaaaatttggagctttatcatttatgccaagccaagattggaaaagagaagtttgttaatctctcgacggagcgtcgtgatgctgaactaaaactgacccttataaccgaaaacaagttgcatccagctttattttcagccagtgctgagcacaagatcctacaaagtcttgctgatgggttgatatcagtaacagcaaaacctcaggatctgcagtgttacttcttccgatgtactgcacgagaacttcttgcatgtgcagtcatgagacctgtcgtgaatttagcaaacccaaggtttataaatgaaagaattgaattgttggctctttctcatgccaacaaggcagaaagaggagttgcagaatcattggagcatgctacaatggttaagcaaagggaacctcctatgccaactgttgatgaacttgctgcactaatagatcccacgagttcaggggttgaacttgtgcgatttagtcaggatcagtccaaagctgcaccagatacgcaactcagtaatactagacatccatctaacctcaaaccaaattcctctagtacttctttgaccaatagttcacatccacttgagtctagcattttatcttccactacccatggtcattcgaattccagtatgtcattgcattcccaaagtagtggcaggacaactgcagaatgttatgagggagaatgggcacagaccatggatatcagctcccagcaaaaaagtcaagccctagcacctgagcaccttgagaacatgtggactaaagggaagaattacaaatcagaaaatgtaaaacatgttgcgagagtaccttccaaatcttcttctctaggcacttctccagtgcagcagtcagctccttacagcacttctgttggtcattatcctagtgctccacaaaggcagacaactatgtctcgttctgatgaccaacatttgattaaacactcaactactgctgcatacttaaatggcaccaatcatctgaggatggctttatccagagaaagtgcagatcatgccagccaagaagactttggagtggacagtgagagttcatatgccactgaggaggatgagaataacaatgtgactgggcttgactctccagtaacgagagtttgggacagcaaaagtaaaggaaatgccacctcatcacatatacaccatccacttgaatctccaggtttccataaagcaaagaagaacagaagtcatattggcaagttgaaaatgacaaaaacttcaggaagaaaaaggtcaaggtcaaattctcaaaagcctcctgtctggcaagaggtggagagatcatctttattggtgggggatgatttaaatatactgaatacatcggcagatgattcaaggacggatggactgtatgatgatactgaggtggaaagtatgtcaaggatgtttagtggtgcgaatgcttcatctttgtcattggcatcaactgactcttcatattcatcaaattattccaccactaatgtgctagaagactcttatttgaagttgaaatgtgaggtggtaggagctagcattgtgaaaagtggatctggcatgtttgctgtatattctgtttctgtgactgatgccaatggtaatagttggtccatcaagaggagatttcgccatttcgaagagctacatcggcgtttgaaagaatattctcagtacaatcttcacttgcctccaaagcacttcctttcgtcagggctagaggtccctgttgttcgagagagatgcaagttgcttgacatatatctaaagaagcttcttcagattcccactgtttcaagctgtatagaggtctgggattttctaagtgttgattcacagacatacatcttcactgacactctctcagttatccagacgttgtcagtcaatttagatgaaagatcaaaagagaagaatacaaaatcattcaattcttcccaagctttgaatgggaatttggtctctgctagccaatctttgcatgtacataaagatgataccatgccgaaggagaaggataaagactttgatgctgttgatggtttgagatcaaggaagaggaacacggaacagaatttaggaattggtgttggcaacacaaatgccaatcttcatgaagacctctctggaagtgaccctgaacagaacgagcattcatttataataaattcgggaaattctaaaaagacactgtcaagtgaaactgactacccgcctcaaagtttggagtctgatggatactcagtagctcctaatgattggatggctccaaatcttagtgtgcccttatttcatttggttgatgtggtttttcagctccaagatggtggctggatcaggaggcaagcattttgggtagtgaagcaaatactgcaactgggaatgggagacacatttgatgactggcttgttgagaaaatccagttacttaggaaggggaggattgttgcttttgcagttaagcgggttgaacaaatactctggccagatggaattttcctgacaaaacatcctaagagaaaagcagcaacacctccacctggttcccagagtaacggcatggccaactatctgactgatgaacaacgactagaggatgctcatcgtgcaaattttgtccatgaactaatgatagagaaagcaccatctgcgttagtgagtctggttggtcgaaaggagtacgaaagatgtgctcaggacgtctacttctttcttcagtctccagtttgtttgaagcagctagcatttgaagtcctagagctccttgtactagctgcatttccagagttggatgacattgtgaagaagtggcatgaagacaaacagcagttgtacgccctggaataa</cdnaseq>|
| |
| − | AA = <aaseq>MATAGGPGRAHTVRDLAEEGKKRAVLLLVFAFGLAFLMSLTSSS VWINLPFATALIVLFRYISLDYDFRRKSTTTTDNDASRALTKTKSIEPNKIPSIQKDG KSDWKSKVNSPPVEAAIEQFTRHLVTEWVTDLWYSRVTPDKEGPEELINIVNNVLGEI SVRARNVNLIALLTRDLIDLICKNLELYHLCQAKIGKEKFVNLSTERRDAELKLTLIT ENKLHPALFSASAEHKILQSLADGLISVTAKPQDLQCYFFRCTARELLACAVMRPVVN LANPRFINERIELLALSHANKAERGVAESLEHATMVKQREPPMPTVDELAALIDPTSS GVELVRFSQDQSKAAPDTQLSNTRHPSNLKPNSSSTSLTNSSHPLESSILSSTTHGHS NSSMSLHSQSSGRTTAECYEGEWAQTMDISSQQKSQALAPEHLENMWTKGKNYKSENV KHVARVPSKSSSLGTSPVQQSAPYSTSVGHYPSAPQRQTTMSRSDDQHLIKHSTTAAY LNGTNHLRMALSRESADHASQEDFGVDSESSYATEEDENNNVTGLDSPVTRVWDSKSK GNATSSHIHHPLESPGFHKAKKNRSHIGKLKMTKTSGRKRSRSNSQKPPVWQEVERSS LLVGDDLNILNTSADDSRTDGLYDDTEVESMSRMFSGANASSLSLASTDSSYSSNYST TNVLEDSYLKLKCEVVGASIVKSGSGMFAVYSVSVTDANGNSWSIKRRFRHFEELHRR LKEYSQYNLHLPPKHFLSSGLEVPVVRERCKLLDIYLKKLLQIPTVSSCIEVWDFLSV DSQTYIFTDTLSVIQTLSVNLDERSKEKNTKSFNSSQALNGNLVSASQSLHVHKDDTM PKEKDKDFDAVDGLRSRKRNTEQNLGIGVGNTNANLHEDLSGSDPEQNEHSFIINSGN SKKTLSSETDYPPQSLESDGYSVAPNDWMAPNLSVPLFHLVDVVFQLQDGGWIRRQAF WVVKQILQLGMGDTFDDWLVEKIQLLRKGRIVAFAVKRVEQILWPDGIFLTKHPKRKA ATPPPGSQSNGMANYLTDEQRLEDAHRANFVHELMIEKAPSALVSLVGRKEYERCAQD VYFFLQSPVCLKQLAFEVLELLVLAAFPELDDIVKKWHEDKQQLYALE</aaseq>|
| |
| − | DNA = <dnaseqindica>7195..7323#6360..6442#5977..6136#5591..5726#5400..5479#4827..5200#4688..4733#4533..4601#3948..4092#3730..3830#2407..3652#2192..2331#1574..1751#1070..1475#174..291#gtccccgcaaaacagaaagtccccggaaaaggatcgcctcgccggccgccgttccctccccacaaacccaaaatcaacagccggccggccaccgccaccgccaccgccacctccccttcctcctcctctcccgcacccccgccgccggcagccgcgcggcggagctgccggcgatggcgacggcaggcggcccggggagggcgcacacggtccgcgacctcgcggaggaggggaagaagcgggccgtgctgctcctcgtcttcgccttcggcctcgccttcctcatgtcccgtgagttctcccaaaccctaagatagcgcttgtctgctggtagcttcgagctctccgataggtagggaggggacggtgatttttgtttgccgatgcatttgttcggtcaccagttccgtgattagggtttatgttggttgctcgttccgatgcatctgatttgaaccgtgtttctcgggtaatcatcctccctagatgcggtaacggcggtagtgatgtactactgatttttgtttcaccatcgtttctactcgctgttgttagggcgtttgttccagcggttgttgcgttgagctcttcattttctgttcattgttgtttttcgagtagagagattagtttgtcccacaggtgctgtaaattgctgcattgagcagttggtaaatttggggtacacttggtgtccgagcggatcatttttcgtgttatatgatgtgttacttcttagagacatcagaaattttgttgctgattgtccattctatgggttcatgcctgtggtggcatgttggtagttgtaaatttgtttaatgtataatgttgcatacaacactaattatatgttagactgcatgattgagtgtagagacaagcgagataagcactaagtatgtcagttcaattttggccttgtggctttgcctatgccagggatcataaagcatacctctgtggaagttgaaaaaaagtgctacatttcgaagaaaagctaagatccatgtttgtttaacccagtattctactgaactaatgtaatgactaattttgtccattgcagtgacaagctcctcagtttggattaacttgccatttgccacagctttgattgttttatttcgctacatatcacttgactatgatttccgtagaaagagcacaactaccacagataacgatgccagtcgcgcacttaccaaaacaaaaagtattgaaccaaataaaatcccctctattcaaaaggatggaaagtcagattggaagagcaaggtgaattcccctccagttgaagctgcaattgaacagttcacaaggcaccttgtcacagagtgggtaacagatctatggtactcccgtgtaacacctgacaaggaaggtccagaggaactcatcaatatagttaataatgtcctgggagagatatcagtccgggcaagaaacgttaaccttatcgctctgctaaccaggttgtgaaaagtctgatctgtcacatgaagtacatgaaacagtgcaaaatttaagaacaatggatgtcttacagtaaaatcttctctacctttttcagggatctgattgatcttatatgcaaaaatttggagctttatcatttatgccaagccaagattggaaaagagaagtttgttaatctctcgacggagcgtcgtgatgctgaactaaaactgacccttataaccgaaaacaagttgcatccagctttattttcagccagtgctgagcacaaggtaagaccgaatggatcatgaagcttccagtttcttgtagtaagttattgtgttttcagatctcaatgtgatcggaaatttgatggaccgctagggctggaattttgattatgtttcacaagtaccacggatgataacaatatgcaccataacactcctgcttcttcacatcgataatcgattatgattatttcttgaatttcatatatacctgtatattacccagctgcccatggtgttgaatctgcgcacggtataagctgagtgttgctaggttaatacatatttaaaaatccggtagattaatcatatgcattcctggtgatctcttgtgtaaactgtttgggaggtatgacatattaaattgtattcccattgtttatctgtttaagcatcaaagatcatatgataacatagtatatgtttatttttccttgcagatcctacaaagtcttgctgatgggttgatatcagtaacagcaaaacctcaggatctgcagtgttacttcttccgatgtactgcacgagaacttcttgcatgtgcagtcatgagacctgtcgtgaatttagcaaacccaaggtagtgagccactgctcctgctctacttgattctgtttttttctgttgtcatcattttgagatgtaaatttgcaggtttataaatgaaagaattgaattgttggctctttctcatgccaacaaggcagaaagaggagttgcagaatcattggagcatgctacaatggttaagcaaagggaacctcctatgccaactgttgatgaacttgctgcactaatagatcccacgagttcaggggttgaacttgtgcgatttagtcaggatcagtccaaagctgcaccagatacgcaactcagtaatactagacatccatctaacctcaaaccaaattcctctagtacttctttgaccaatagttcacatccacttgagtctagcattttatcttccactacccatggtcattcgaattccagtatgtcattgcattcccaaagtagtggcaggacaactgcagaatgttatgagggagaatgggcacagaccatggatatcagctcccagcaaaaaagtcaagccctagcacctgagcaccttgagaacatgtggactaaagggaagaattacaaatcagaaaatgtaaaacatgttgcgagagtaccttccaaatcttcttctctaggcacttctccagtgcagcagtcagctccttacagcacttctgttggtcattatcctagtgctccacaaaggcagacaactatgtctcgttctgatgaccaacatttgattaaacactcaactactgctgcatacttaaatggcaccaatcatctgaggatggctttatccagagaaagtgcagatcatgccagccaagaagactttggagtggacagtgagagttcatatgccactgaggaggatgagaataacaatgtgactgggcttgactctccagtaacgagagtttgggacagcaaaagtaaaggaaatgccacctcatcacatatacaccatccacttgaatctccaggtttccataaagcaaagaagaacagaagtcatattggcaagttgaaaatgacaaaaacttcaggaagaaaaaggtcaaggtcaaattctcaaaagcctcctgtctggcaagaggtggagagatcatctttattggtgggggatgatttaaatatactgaatacatcggcagatgattcaaggacggatggactgtatgatgatactgaggtggaaagtatgtcaaggatgtttagtggtgcgaatgcttcatctttgtcattggcatcaactgactcttcatattcatcaaattattccaccactaatgtgctagaagactcttatttgaagttgaaatgtgaggtattacattctccttttagttatcctggtcctgataactatagatggcacatatatttattcaatttcttattcaggtggtaggagctagcattgtgaaaagtggatctggcatgtttgctgtatattctgtttctgtgactgatgccaatggtaatagttggtccatcaagaggaggtgattatattctagttttgtattcacgtgagctgtaacagatattgcacctatgattattcaaacgtggtgatacttctttttaactggacttgcactattttttgaccttatcagatttcgccatttcgaagagctacatcggcgtttgaaagaatattctcagtacaatcttcacttgcctccaaagcacttcctttcgtcagggctagaggtccctgttgttcgagagagatgcaagttgcttgacatatatctaaaggtgtttttcttgtgctgtttgaagattccaagttcattttttcaatcgctccataccttataattcgaacttaagaccaactttcatgaggcctaaaacgatgcaaacatatcgcaagcagcagagagttttcttgctattttcttcggaggtataccagatagtgtgcttcttagaattcttcagacgtatgaatagacttgcaagcatgcatgtgcagctaattacatcttcatcgatgttagtttgttggcttgttatatatttagtaaacatctgtgagctttgttttctgttctcctgttgctatatggtaactttattttttttccatgttttgcttcaagtgtttcgttgtctgaacataatgcatgcttatgaaatttgaatgctcatttaaacaaaacacacttctaatcacatgattatttgttctacagaagcttcttcagattcccactgtttcaagctgtatagaggtctgggattttctaagtgttgattcacaggttagtgttttctttaatcttgttgcactcacccgttgaaactggtatattataattcaataacttgtcaaatgtcctcgctgcagacatacatcttcactgacactctctcagttatccagacgttgtcaggtgaataatccccttttagttgagtagctaatctattttttaaaccgtttgcgttttcatgctatttaatgcccattctgtgatatcacacagtcaatttagatgaaagatcaaaagagaagaatacaaaatcattcaattcttcccaagctttgaatgggaatttggtctctgctagccaatctttgcatgtacataaagatgataccatgccgaaggagaaggataaagactttgatgctgttgatggtttgagatcaaggaagaggaacacggaacagaatttaggaattggtgttggcaacacaaatgccaatcttcatgaagacctctctggaagtgaccctgaacagaacgagcattcatttataataaattcgggaaattctaaaaagacactgtcaagtgaaactgactacccgcctcaaagtttggagtctgatggatactcagtagctcctaatgatgtaagttatagtaattagttctactgccacattttgttatcgttcttgcatttgagcagtcttttgttcctccatttttgttcttttactttaattgtacgtggtgcaccagctgcctgccttataacttcaaaattaattgcacatggtgcaccagctaacctgcctgactaataacttcaaaactactataatgcagtggatggctccaaatcttagtgtgcccttatttcatttggttgatgtggtttttcagctccaagatggtggctggatcaggtacatcattataatttctaacttttagcgtatctaactttagtatttgcacttgtagaataaacccccaagtaaaatagttcctactgtcgttcttctttttatttttaggaggcaagcattttgggtagtgaagcaaatactgcaactgggaatgggagacacatttgatgactggcttgttgagaaaatccagttacttaggaaggggaggattgttgcttttgcagttaagcgggttgaacaagtaagtgtcaaatccttagcaatgcaggtgccaaggtgccagcagagtgaaagggaactgttttctttgatgcagctaaataaatcatattataagactttctagcattacccaaattcatatagatgttaatgaatctagacacacatatgtctagattcattaacatatatatgaatgtgggtaatgctagaaagtcttataagtctttggtctgaattgcataattttctaatttcactctgtgcagatactctggccagatggaattttcctgacaaaacatcctaagagaaaagcagcaacacctccacctggttcccagagtaacggcatggccaactatctgactgatgaacaacgactagaggatgctcatcgtgcaaattttgtccatgaactaatgataggtgaacttcatacgtaatattattctatgggtgatgctacaccactttattttgttaaaatatattgttttccctcttagtttgcttccgtagttgtagagatgtaatgattcccttctaataacagacttgttgcctgaatttgaatgcttcataactgcttttagtctttaaagtccgcatgttgttttaacactaccatcttactgttttatctgcacagagaaagcaccatctgcgttagtgagtctggttggtcgaaaggagtacgaaagatgtgctcaggacgtctacttctttcttcaggtaaatatgcccagaggattcaggtcatacctttttttttgcgaggaaaaaaagtagatcatactggatgcaaatttaccattttctgagcattctgcatgatattaccattagaactcacaactttcttcaaaagaaacactgaaatcattatttttttttaagcagctaaggtaggcagtcttaacatcacatgcctcatgttgggggtgttgtgagtttaaccatgtttttgtagaagttagggtactagtgtatctcacagaaattcatagagaccttcaataacaagctcaatcagcatctacctgtgtagagtagtaatgtttttgaaaagtaaatgtatatctaataatgtgacttgattaaacttctctgaaccaatttgggagtttgttgaagcaataatatttatacgaaactgggataccttttccacaaatgtatgtccttgtggcatgcacgtactcactttgacctaaactgcctaaaggtatgtagatttggccagagtatatggacaggttgattgtaaaagatgatttcgtgatattattataaatcataaagtttttgtaacatacgcatgggacacggctataaatattgatgtctctctctgtgtctctcttaaactaaaaaacatgtatttgtgaaaagaaaattcttaggaaacaaccttaaggtcaaatacagtagcatcagtaactatatgatccttgactgatgtttggagtttattttctgtacagtctccagtttgtttgaagcagctagcatttgaagtcctagagctccttgtactagctgcatttccagagttggatgacattgtgaagaagtggcatgaagacaaacagcagttgtacgccctggaataatttttcatggtgaacgaattattccgcagggtcagatcaaacacgtatgcttgatgcagagtgcagatccattccagtgtaaataagggaatcccgaaatcagtgctgttttgacatttctgtttaaatggaggcgacttcgtgcagtgtgaatatgattagttagcagtttgtgagaacggtcccttctcccccatggaccagtaggccgtttttttgttcgacagactggtctctctttttttttctcatagaatcatagagtttggtatacataatgcagcttgaaagaaagaggtcacacagtatttttttactgtaggtgtagggttgatgtactttttgttagcgtctgttttttgtcccctgtgggtgttaccaaattttgtaactccgcattacgttgaatgaaataaagaagtgatccaggaattcctc</dnaseqindica>|
| |
| − | Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001062982.1 RefSeq:Os05g0583500]|
| |
| − | }}
| |
| − | [[Category:Genes]] | |
| − | [[Category:Japonica mRNA]]
| |
| − | [[Category:Oryza Sativa Japonica Group]] | |
| − | [[Category:Japonica Genes]] | |
| − | [[Category:Japonica Chromosome 5]]
| |
| − | [[Category:Chromosome 5]]
| |
Please input one-sentence summary here.
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
