Difference between revisions of "Os06g0143900"

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==Structured Information==
 
==Structured Information==
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{{JaponicaGene|
+
    [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 6]]
−
GeneName = Os06g0143900|
 
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Description = Similar to Coatomer protein complex, beta prime|
 
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Version = NM_001063314.1 GI:115466359 GeneID:4340097|
 
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Length = 8815 bp|
 
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Definition = Oryza sativa Japonica Group Os06g0143900, complete gene.|
 
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Source = Oryza sativa Japonica Group
 
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  ORGANISM  Oryza sativa Japonica Group
 
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            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
 
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            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
 
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            clade; Ehrhartoideae; Oryzeae; Oryza.
 
−
|
 
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Chromosome = [[:category:Japonica Chromosome 6|Chromosome 6]]|
 
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AP = Chromosome 6:2319838..2328652|
 
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CDS = 2320326..2320345,2320800..2320911,2321101..2321245,2321362..2321468,2321581..2321674<br>,2321761..2321957,2322320..2322391,2322513..2322627,2323069..2323185<br>,2323262..2323353,2323454..2323630,2323755..2323829,2323920..2324060<br>,2324680..2324868,2325307..2325372,2325454..2325604,2325727..2325795<br>,2326302..2326450,2326535..2326666,2326765..2327090,2327176..2327212<br>,2327935..2327988,2328112..2328174,2328298..2328318,2328473..2328475<br>|
 
−
GCID = <gbrowseImage1>
 
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name=NC_008399:2319838..2328652
 
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source=RiceChromosome06
 
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preset=GeneLocation
 
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</gbrowseImage1>|
 
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GSID = <gbrowseImage2>
 
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name=NC_008399:2319838..2328652
 
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source=RiceChromosome06
 
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preset=GeneLocation
 
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</gbrowseImage2>|
 
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CDNA = <cdnaseq>atgccgctcaggttggagatcaagaggaagtttgcgcaacggtcggagagggtcaagtcggtggatctgcaccccacggagccatggatcctgtcgagtctttactccgggagcgtgtgcatctgggactatcagtcgcagacaatggtgaagtcatttgaagtttcagaattgccagtgcggtcagcaaaatttatttcacggaaacaatgggttgtagctggtgcagacgatatgttcattcgtgtctacaactacaacacgatggacaaagttaaggtttttgaggctcatactgattatattagatgtgttgcagtccatccaacacttccatatgtgctttcatcatctgatgacatgttgataaaattgtgggactgggataaagggtggatgtgcactcaaatctttgagggacattcacactacgtgatgcaagttactttcaatccaaaggatactaacacttttgcaagtgcatctcttgaccgaactacaaagatatggagtttgggttctccggatccaaatttcacactcgatggacatcaaaagggtgtgaactgtgttgactacttcactggtggtgacaggccctatttgatcactggttctgatgactccactgcaaaggtctgggattaccaaacgaagagctgtgttcagacacttgaaggacatacacacaacatttctgctgtttgtttccatcctgagcttcctataatcattactggatctgaagatggcacagttcgcatatggcattcgacaacttacagacttgagaacacgctaaactatggtcttgaacgagtctgggctgttggatacatgaagggttcaagaaggatggtaattggttatgatgagggaactataatgataaaaatgggacgtgaagtacctgtggcaagcatggataccagtggaaaaatcatttgggcaaaacataacgagatacagactgtgaacatcaaaactgttggtgcaggctttgaggttacagatggggaaagattgccattggctgttaaagaattaggaagttgtgatctttacccacagagcttaaagcataaccccaatggaagatttgtcgtagtttgtggagatggtgaattcataatttatactgcattggcttggaggaataggtcatttggatctgcattggagtttgtttggtcatcagaaggagagtatgctatcagggaaagtacatcaagaataaagattttcagtaaatcatttcaggagaagaaaactattcgccctacattttcagctgaacgtatttttggtggaatattattggcgatgtgttccagtgatttcatttgcttttatgactgggctgactgtagactaatacgccgcattgatgtgaatgtcaaaaacctttattgggctgatagcggtgacctagttgcaatagcaagtgatacatcattctacatactgaagtacaacagagatgtcgttgcgtcttatctagaatctggaaaacctgtggatgaggaaggcgttgaagatgcttttgagctgcttcatgaggttaatgagcgagtgcggacagggatctgggttggagactgctttatttataacaattcatcatggcgcctgaactattgtgttggtggcgaggtcaccacgatgtatcacttggatcgccctatgtacttgttgggatatctagcgaatcaaagccgagtttatcttattgacaaggaattcaatgtcatggggtacacattacttcttagtttgattgagtacaagacacttgtgatgcgtggggatattgaacgtgcaaatgatattttaccatccataccaaaggcgcaatataataatgttgctcatttcttggagtcaagaggtatgctggaggaagcacttgagatagctactgatgctgattacaggtttgacctagctgtgcaacttggaaaattagaagttgcaaaggctatcgcgatggaagcgcaaagtgaatctaagtggaagcagttgggtgaactggctatgtccacaggcaagctagatatggcggaagagtgccttgtgcaagcgaaggacttaagtggcctgttgctactatattcatctcttggagatgctgagggaatcgagaagcttgcttctcaagcaaaggagcatggcaaaaacaatgttgctttcctctgtctctttatgcttggtaaattggaagattgcatacaattgctgatagacagcaatcgtatacctgaagctgcgttaatggcacgttcttatcttcccagcaaagtttctgagatagtagcaatatggagaaatgacctcagtaaagttaatccaaaagctgcagagtctctggcagatccttctgagtatccaaatttatttgaagactggcaggttgcacttactgtagaaaagaatgttgcttctcggagggtccattatcctcctgctgatgagtacttgaaccatgctgaaaagtcagacatgactcttgtggaagctttcaaaaggatgcaggtcattgaagatgaggaaacagaagatgcactagatgaaaatggagagcccgatgaagaggttttggaagagaacaaagtggaggagagcacagatgaagctgtcgaagttgatgctgatgagcctgaagagaccgttcttgtaaatgggaaagagggtgaggaacagtgggtgctaactgaacatgagtaa</cdnaseq>|
 
−
AA = <aaseq>MPLRLEIKRKFAQRSERVKSVDLHPTEPWILSSLYSGSVCIWDY                    QSQTMVKSFEVSELPVRSAKFISRKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYI                    RCVAVHPTLPYVLSSSDDMLIKLWDWDKGWMCTQIFEGHSHYVMQVTFNPKDTNTFAS                    ASLDRTTKIWSLGSPDPNFTLDGHQKGVNCVDYFTGGDRPYLITGSDDSTAKVWDYQT                    KSCVQTLEGHTHNISAVCFHPELPIIITGSEDGTVRIWHSTTYRLENTLNYGLERVWA                    VGYMKGSRRMVIGYDEGTIMIKMGREVPVASMDTSGKIIWAKHNEIQTVNIKTVGAGF                    EVTDGERLPLAVKELGSCDLYPQSLKHNPNGRFVVVCGDGEFIIYTALAWRNRSFGSA                    LEFVWSSEGEYAIRESTSRIKIFSKSFQEKKTIRPTFSAERIFGGILLAMCSSDFICF                    YDWADCRLIRRIDVNVKNLYWADSGDLVAIASDTSFYILKYNRDVVASYLESGKPVDE                    EGVEDAFELLHEVNERVRTGIWVGDCFIYNNSSWRLNYCVGGEVTTMYHLDRPMYLLG                    YLANQSRVYLIDKEFNVMGYTLLLSLIEYKTLVMRGDIERANDILPSIPKAQYNNVAH                    FLESRGMLEEALEIATDADYRFDLAVQLGKLEVAKAIAMEAQSESKWKQLGELAMSTG                    KLDMAEECLVQAKDLSGLLLLYSSLGDAEGIEKLASQAKEHGKNNVAFLCLFMLGKLE                    DCIQLLIDSNRIPEAALMARSYLPSKVSEIVAIWRNDLSKVNPKAAESLADPSEYPNL                    FEDWQVALTVEKNVASRRVHYPPADEYLNHAEKSDMTLVEAFKRMQVIEDEETEDALD                    ENGEPDEEVLEENKVEESTDEAVEVDADEPEETVLVNGKEGEEQWVLTEHE</aaseq>|
 
−
DNA = <dnaseqindica>8308..8327#7742..7853#7408..7552#7185..7291#6979..7072#6696..6892#6262..6333#6026..6140#5468..5584#5300..5391#5023..5199#4824..4898#4593..4733#3785..3973#3281..3346#3049..3199#2858..2926#2203..2351#1987..2118#1563..1888#1441..1477#665..718#479..541#335..355#178..180#gtcctttccttcctcccaccctcctcgtcgctcccccgccgagctcgcgatcggattcgcttcgcctccgcctccgcctccgcgtcgccgcgccgccgttgccgcggcggatctctagggtttagccccccccgcgcggcccggctcccccgctctgcccacgccgttgccgccaccatggtacgtacgcggatctgaactttggccagcgcgctctcgctgttccgatcaatccgctcgcccgttttttttttttgtgtgtgttgggaagtaattgggtgtggtttggggagagatctgatcaaatgttgttttctgcttgtgcttcctgcagccgctcaggttggagatcaaggtgcgccactggctcgggctcggcgagcccgattccgctagatctcggtttgttgctgtctcagttggtggttagttttgtgctgattttgtggttgttttgtctttgggatggtgtgattagaggaagtttgcgcaacggtcggagagggtcaagtcggtggatctgcaccccacggagccatggcaagtgacctgcatttctgagggttttagcacattttagcctgatttgagccgttcgtactaccattttgatgtgcttttgcttcattatttgattattaagctgtttttgcattggtgtaggatcctgtcgagtctttactccgggagcgtgtgcatctgggactatcagtcgcaggtaagagttctagttgcattttaggttcattgtttccccattaagcaagactaagactcaactacttttgaagtaaatatgaatattcaaaactgtactcatgctaattgaccgaagcatgattgtgcataaaattagggcttctgtttctataatctatatggtttcttattagttttgcatgtcttgagctcaaattttgctttacaacttaatcacatgacggatgaaggggtatatgctaagtagttttgtcattcatccttaaatcatgctttccagttagtacaaatcactatgggaggaacatagaagcatttctcaccacattattacatcttcacacttatgttatactcccactgaagtttaatgccatctgtggctaactgatccattatatgtaatatatattatttttggtggctgcaaagcctcagtgccttattccaatgtaatatgttatttttggtggccgtcaaagctttggtgccttactccaatgtaacatgtaagccttttacaattttgcattgacctataggatgatcggttgatgcctagtcttatatcatgaccatcattgtttggatttgaaccacatagaattgactctgcatttcaaatcagcgtattccatcacatgctcctgcaatcctgcataatctatacttagcgttccatttgattattaacatgttttccttggtgtatgtttgcagacaatggtgaagtcatttgaagtttcagaattgccaggtactcatctgcttatgttcacatgaaatgaaaatctgtcatagaggttgaattgatgctaacttgtatctgatcttaatttcagtgcggtcagcaaaatttatttcacggaaacaatgggttgtagctggtgcagacgatatgttcattcgtgtctacaactacaacacgatggacaaagttaaggtttttgaggctcatactgattatattagatgtgttgcagtccatccaacacttccatatgtgctttcatcatctgatgacatgttgataaaattgtgggactgggataaagggtggatgtgcactcaaatctttgagggacattcacactacgtgatgcaagttactttcaatccaaaggatactaacacttttgcaagtgcatctcttgaccgaactacaaaggtctgtttcacaatctcttatgcagtggatgttattcacaatatatggctttttatgaggtgatttgtgcactaatggttctaaaactgaaacaacagatatggagtttgggttctccggatccaaatttcacactcgatggacatcaaaagggtgtgaactgtgttgactacttcactggtggtgacaggccctatttgatcactggttctgatgactccactgcaaaggttttttttttctatccacttttgagtgttccaagtatccacgattctgtgcagtcctaagatggtgtggtcatggtgaaccaggtctgggattaccaaacgaagagctgtgttcagacacttgaaggacatacacacaacatttctgctgtttgtttccatcctgagcttcctataatcattactggatctgaagatggcacagttcgcatatggcattcgacaacttacaggttgctttcacagtttcacttgtgtttttgcttgttgatgtggactgtttcctagttctcattgtttgctattcaagtgctctctacgaaagaaacaacttgtaatttcctggttctcatttctggattctggatattttgctttttctcttggcaacctctcaagtcctgggttcaaaatttgatccaaaagtttttacatattttcttagaggaaattttccccaatatagctttttggtataattatctcataactcttaaacatattatgcatgggctattcttacatagaaaagctccaaatctatgttagacattggaaaagagggtagctgacagtgtaatctatgtaccattcggtctgtttttgtcattaatttatctgttcctttttcttatggtctggaatatttgttagttgttggcagctcactacttaatacttatgtcagttatgattgccacaatgttgaggtgttcttattttttaatttattttgtagacttgagaacacgctaaactatggtcttgaacgagtctgggctgttggatacatgaagggttcaagaaggtaaacagaagatcctttgcattctgcttttgtgttgcattgtaatcaattgcttttactactgttctgcgtcactcctcctttcaattttttaacaccattcgacattttatgatatgtaggatggtaattggttatgatgagggaactataatgataaaaatgggacgtgaagtacctgtggcaagcatggataccagtggaaaaatcatttgggcaaaacataacgagatacagactgtgaacatcaaaactgttggtgcaggctttgaggtcagttggcctgtttgcaaacagaatcgatcaatcaaacagagaagctgatctcatgccctactatgttttcttattcaggttacagatggggaaagattgccattggctgttaaagaattaggaagttgtgatctttacccacaggtatttttgaatgtcacaactcacaacgctctttatattttactcctgatactgttagcagtgctgcagtaacctatgtgtttgaacttctgcataaatagcatccattaatctcacatcagcatatatagtggttatcatccatgcctgcagcttgtgaattgtgatgacttgtaaatggttatgctaataagcttagtgaaagaacatatggaacttgtagttcaataggtgacattgtccaattagtgttaattgctttgattgatagttttcacacaaccactacctctattttgtgttccttgtgattccttgatgtgatattagactgagatggctacaacatttcttttctttctactaggtaatgttagttgtttgtcatatcttgaatagtattcaatcttactatgtgtcatctttttgtttggtcagagcttaaagcataaccccaatggaagatttgtcgtagtttgtggagatggtgaattcataatttatactgcattggcttggaggaataggtcatttggatctgcattggagtttgtttggtcatcagaaggagagtatgctatcagggaaagtacatcaagaataaagattttcagtaaatcatttcaggtttggcccacattgattgtagcctttccttttatgaatttgatcagtaaaactgtagtgtttcatttcttcaatcaccactctggagaatgcaccatcttcacctgtttatcactttgcctttaaccgtgaatttacaccttgcaatattcaattgagatgtctaatgtactattgtttggctaactattgagttaacttttatttaatcaataaaggtttctggttaacacgagcgttcattcaatcaaaagttttatgttgtgcattttaatgtctgttcatgattcatcaatcatcatgtttggtgaaaggaaattacatactgatttaggtttgcatctcattggacctagtcacctagatgacagtttctttttcttacactatatatcttacttcctgacaatctgttgtcattcagccaatcagcctacatgaatactccatttatgtttagctataacattgatctagaaacaatttaagcgtaggttgatttaattagttactatgttctaaggaccttttattaatgaatttggcaaagaattgcacatcatattctgttggcatttatcaatattgtatcttctggtttgaatgatccaatatgcaggagaagaaaactattcgccctacattttcagctgaacgtatttttggtggaatattattggcgatgtgttccagtgatttcatttgcttttatgactgggctgactgtagactaatacgccgcattgatgtgaatgtcaaagtgagtcaaatattatctattgatatttatagattgatacttttaacgaatttcatactgaaataactagttttgtcactgtatttttagaacctttattgggctgatagcggtgacctagttgcaatagcaagtgatacatcattctacatactgaagtacaacgtaagttattgtattatctaaatgttcattatgttatttcttttctcctcttgaatgtgttattgcgtgaaagttctttttttaccatggcatgaagttatgtttgtaatttgtgttcctacagagagatgtcgttgcgtcttatctagaatctggaaaacctgtggatgaggaaggcgttgaagatgcttttgagctgcttcatgaggttaatgagcgagtgcggacagggatctgggttggagactgctttatttataacaattcatcatggcgcctgaactattgtgttggtggcgaggtatatattgtgtgctccatgcaagaatttttattttgttaatgtattttctattgtagtattttgtgcactacaaatttatcccgttgtacatttacaggtcaccacgatgtatcacttggatcgccctatgtacttgttgggatatctagcgaatcaaagccgagtttatcttattgacaaggaattcaagtgtgttttcttgataatactgcctgcttattgtctggtgttgaattcttgaactaacatatttttcttgttgcagtgtcatggggtacacattacttcttagtttgattgagtacaagacacttgtgatgcgtggggatattgaacgtgcaaatgatattttaccatccataccaaaggcgcaatataataagttagttgctgacttttgatccaaaacaatgagtttcttttattttggtacctgtttctctttgaacctgttgatttggtttcttaataattttgttccttttttaaaagtaacaaaacaatgatagatggaagcgtgaaaatacatttatatgctaaattacaattacatttcaatagctatcatgatgtgccttattgaatgactgttatgtagcacatcacacctaaaatagattcaactgttaggagtattggcatctagttttttgaaacaaaaatacatatattgtttctactctatcttcattgtagtcgtgtaaaggagtactgattaatggaagtgccaaataacaaaatcataaaaaatttcctagcagtgcattttgtcctgttgtgttttgatggtttcttactcctcccattacttttcatatggcagtgttgctcatttcttggagtcaagaggtatgctggaggaagcacttgagatagctactgatgctgattacaggtttgacctagctgtgcaacttggaaaattagaagttgcaaaggtacagaacatgttgtattgtgtttttgttccacattattgaaataatgttctgaaaggtcttccatgctgtgaagttcattgctaataaacagaatggattctggacattttctgtgcaggctatcgcgatggaagcgcaaagtgaatctaagtggaagcagttgggtgaactggctatgtccacaggcaaggttagttcataaatcttgtgaaagacttttggtatatgctttcaaaagtaatgacagtgccatagtatctaggtgcttgttgtcaaggtgctagattacctggagtgcattattgagttcgaggttttgtcctctttagacttagaggaaaaaccaaactagacatgcttttggaaatcagctgagacttgtcctttatcctttcacgatctagtttctgtgcatagaaatatggaaatggcaatagttgacactactacactagttcatattgacatcatttgatgacaattaatgcaaatcatttatattctgtttgttaccttgttttctgactttaaatcatttcacaacttcaacagctagatatggcggaagagtgccttgtgcaagcgaaggacttaagtggcctgttgctactatattcatctcttggagatgctgagggaatcgagaagcttgcttctcaagcaaaggagcatggcaaaaacaatgttgctttcctctgtctctttatgcttggtaaattggaagattgcatacaattgctgatagacaggtacatgtacatcctgtttgctgttatgaactccccattgtagtaaatcatttttcaaagctaaacctcatctatgtattatacagcaatcgtatacctgaagctgcgttaatggcacgttcttatcttcccagcaaagtttctgagatagtagcaatatggagaaatgacctcagtaaagtaatttcttaatcttctgctcttatctttgcattgaaaagtgtgcttccatccagaaaacattttctgttattgttctggttttatctattcatatgttccttctgtacaggttaatccaaaagctgcagagtctctggcagatccttctgagtatccaaatttatttgaagactggcaggttgcacttactgtagaaaagaatgttgcttctcggaggtaaaaattaccagagaagctgctttttttattattaccatgtaacgctaccaattcttttggaagaaactattgtataaacaaacctggtacaatgataaggtctctttcttcagggtccattatcctcctgctgatgagtacttgaaccatgctgaaaagtcagacatgactcttgtggaagctttcaaaaggatgcaggtcattgaagatgaggaaacagaagatgcactagatgaaaatggagagcccgatgaagaggtattgcgtgtggagtgtgcattttgctatccatgttcaacttattatgaaatttttcaactttcctttctagtgttgatgaccgtgtcactcaaccattgttccgtttatcctttctccttgattaaatgtctgtagtgctatattcatcatcatgttctgaaaataataacataggattcctcataggttttggaagagaacaaagtggaggagagcacagatgaagctgtcgaagttgatgctgatgagcctgaagagaccgttcttgtaaatgggaaagagggtgaggaacagtggggtacgaacaatgaaggaacttcgtcagcctaaaagaattgtttggcaagtgtaaaaacccaaattttgtctgcggtgattcactagctttgcccccaaattataggactgttgaacctttctagtacttcagtttttgaaaaagtaaatctgacccctttggaattatagaccattaccaacagttagcaaattgaaatatagatatgcattatgagatgagttctattattatattttttttaaaaaaaaatattctgtatgttctgctgttttatttgctcctatatagcgtatattggctgctaagacgctaagacaaggatattcatccatccaccatttgggcctgatatgtagggtcaagcttatagctagcttatttttttgttcttaaaccagtttttttattctaattattgaactgaatttattcttttcttttctccttgcagtgctaactgaacatgagtaaggaccaaggatgctgtgccgttttgcattggtgatgctgtgccgtttgagctttgatcttatcatatccttcaactgaactccaaactcaagacatggaagcatgcttgtccaatggtatcaatccagaccggcttcttttttgctgcaatataggtgattctttcgtcctgcaacattttcatacccactcttcacgtcctgaaatcagtgggtttgggtgcagagctggttgtaacgaagggttttcttaataatttctatagagatgtgtagtatatgccacattaccatagccatcgcatgtcttctaggagatcaaagttttcgttggccatccactgtaatttcatgttattggacaaagtttacatgtagcatatgattgtggtgttaaaagctttccgtgtataattctctgttggtgctttgccgttgaacactgctgttgaaaatgctgattccttggaagagttaatctatcatttc</dnaseqindica>|
 
−
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001063314.1 RefSeq:Os06g0143900]|
 
−
}}
 
−
[[Category:Genes]]
 
−
[[Category:Japonica mRNA]]
 
−
[[Category:Oryza Sativa Japonica Group]]
 
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[[Category:Japonica Genes]]
 
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[[Category:Japonica Chromosome 6]]
 
−
[[Category:Chromosome 6]]
 

Latest revision as of 08:46, 14 May 2015

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Annotated Information

Function

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Structured Information