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| Line 20: |
Line 20: |
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| | ==Structured Information== | | ==Structured Information== |
| − | {{JaponicaGene|
| + | [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 6]] |
| − | GeneName = Os06g0309000|
| |
| − | Description = Zinc finger, FYVE/PHD-type domain containing protein|
| |
| − | Version = NM_001064013.1 GI:115467757 GeneID:4340852|
| |
| − | Length = 8577 bp|
| |
| − | Definition = Oryza sativa Japonica Group Os06g0309000, complete gene.|
| |
| − | Source = Oryza sativa Japonica Group
| |
| − | | |
| − | ORGANISM Oryza sativa Japonica Group
| |
| − | Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
| |
| − | Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
| |
| − | clade; Ehrhartoideae; Oryzeae; Oryza.
| |
| − | |
| |
| − | Chromosome = [[:category:Japonica Chromosome 6|Chromosome 6]]|
| |
| − | AP = Chromosome 6:11794019..11802595|
| |
| − | CDS = 11794358..11794406,11796326..11796468,11796813..11796926,11797099..11798132,11799967..11800291<br>,11802087..11802410|
| |
| − | GCID = <gbrowseImage1>
| |
| − | name=NC_008399:11794019..11802595
| |
| − | source=RiceChromosome06
| |
| − | preset=GeneLocation
| |
| − | </gbrowseImage1>|
| |
| − | GSID = <gbrowseImage2>
| |
| − | name=NC_008399:11794019..11802595
| |
| − | source=RiceChromosome06
| |
| − | preset=GeneLocation
| |
| − | </gbrowseImage2>|
| |
| − | CDNA = <cdnaseq>atggggagcgggcgggagcggaagcggcggcggaggggggagatggggcgggtggcggggatggtgatggtgctcgcggcggcggggcaggcgcggggcgggggcgcgcccacggcggcggagcgcgcgctcgcggcggtggcgcgggagcggctgctggaggcggcggagttgctggcgcggcccagggagctgttcccgagggaggcggtgcgggcgctcgtggaggacctcggcctcgcccgcggcagggacccctccgccatgggctaccgcccgcgcagggcctccatcgccgagaggatcctcctcaccaagcgcaagatggaagaaatcaaggaggctccagtgtatccaacaactaatgtgtctcaaacaacagccacgagagcaacaactgtcttccaacatggagcttctaagccaactactgggttgcccatgaatatttcagctgttgcctcattccctgtcacaaccccacctactataccatccccaaatatcttgaagcagacacagttaaatgaatcaccatcaggagtgaaagcagctggtacctcttcaattgtttcagtaccatctgttggtcctacaaatattaaagtggaaaagggtgttaatagtcctacttgcacacaaaatggagcaactataggtcaagcaaataaatcagctcatcttacagcaactatgtctaatccaaatatagtaccttcttccagtcatgaagggacgcctcagcatgaaaaggcacctgtaattcgacccatcaccgtaaaaaatggtatgacacatcaatctcgacctggagtatcatttattcagcgacaatccacctttcccaatcatagtgcaattgcaaaaacggttcaacaagttctgcatcaacctgtcaatcatcctaactggatcccaccatcaactgagtatatgcgtagtgggctaggttgtcaagtatgtaaagtttttatcatcgacatacatagtatgattatttgtgatgcttgtgagaggggcatacacttaaaatgccttcagcatgacggggtcaatgttctaccacctaaagctgagtggtattgtccaacatgtgtagctcgtagcaagggaaaacccctgcctccgaaatatggcaaggttacaagaactgttgttgcaccaaaggttaatcttattagtggagttccttcgcagggagtttctgaaaatcgaactacaaaggataataatcaagaacttgcagcagatggaacagttatcgataaaaactccagtgaagctaacaggattgtacataatagtgataagttggctttggagagttcaaaagaacaatcacaatcaggctctgcttctgcagctgttgataagggaagaggaaaacctcaaggtgtgggaacaatggaaaataatgccatttcagaacgtggcaatgttcatgagttgacatcgaatggggatttatctacaaagaatgaaattgttataggcgatgctaaggataaaactattgtttgcagcacagatcacagtattgtgggttgggttggtgatcctctcagagtagtcgagaacaagacttactattactcttgtaacattgatggtatagcatacaatcttgatgatcatattttggttgcctccaaagataaggagtctgctccatccaagctgcagtcactgtgggaagagcatgattctaggtctaagatggctttggttagtccatatttctttgcttcagatattccagaattgatcagtaaaccatgcactgcagaagagaatgaggtatttgcttcctgtaatcaaagaactgtaacagtttccgcgatttgtggccaatgtgaggttcttcatgttgacaagtttagagaagaaactaagggaagtcaggttgtcagtagtaggctacatccaattttcctctgcaggtggaagtatgatgaatcaacaagcagtttcagtagtgtcaataattag</cdnaseq>|
| |
| − | AA = <aaseq>MGSGRERKRRRRGEMGRVAGMVMVLAAAGQARGGGAPTAAERAL AAVARERLLEAAELLARPRELFPREAVRALVEDLGLARGRDPSAMGYRPRRASIAERI LLTKRKMEEIKEAPVYPTTNVSQTTATRATTVFQHGASKPTTGLPMNISAVASFPVTT PPTIPSPNILKQTQLNESPSGVKAAGTSSIVSVPSVGPTNIKVEKGVNSPTCTQNGAT IGQANKSAHLTATMSNPNIVPSSSHEGTPQHEKAPVIRPITVKNGMTHQSRPGVSFIQ RQSTFPNHSAIAKTVQQVLHQPVNHPNWIPPSTEYMRSGLGCQVCKVFIIDIHSMIIC DACERGIHLKCLQHDGVNVLPPKAEWYCPTCVARSKGKPLPPKYGKVTRTVVAPKVNL ISGVPSQGVSENRTTKDNNQELAADGTVIDKNSSEANRIVHNSDKLALESSKEQSQSG SASAAVDKGRGKPQGVGTMENNAISERGNVHELTSNGDLSTKNEIVIGDAKDKTIVCS TDHSIVGWVGDPLRVVENKTYYYSCNIDGIAYNLDDHILVASKDKESAPSKLQSLWEE HDSRSKMALVSPYFFASDIPELISKPCTAEENEVFASCNQRTVTVSAICGQCEVLHVD KFREETKGSQVVSSRLHPIFLCRWKYDESTSSFSSVNN</aaseq>|
| |
| − | DNA = <dnaseqindica>8190..8238#6128..6270#5670..5783#4464..5497#2305..2629#186..509#gtgtggctgtgtcgcaaaaatcttccccaatctcgctcgctctccgccccccctcgcttcgcttcgcgccgcgctccaacgatccaccgccaccctcgcgccaaaccgagccatttcaaaactcctccccccgcccttcccgaaccttctagaagcccctcccctccccttcccgcgcacgggggatggggagcgggcgggagcggaagcggcggcggaggggggagatggggcgggtggcggggatggtgatggtgctcgcggcggcggggcaggcgcggggcgggggcgcgcccacggcggcggagcgcgcgctcgcggcggtggcgcgggagcggctgctggaggcggcggagttgctggcgcggcccagggagctgttcccgagggaggcggtgcgggcgctcgtggaggacctcggcctcgcccgcggcagggacccctccgccatgggctaccgcccgcgcagggcctccatcgccgagaggatcctcctcaccaagcgcaaggtttgcccacataagcctctttcacactccagctcttcttctcgttcactctgtgagtatatgtttcgattggatgtgcgtacgtacaagaggggtatatggaataatctcgaagagatccctgtgtttggtttggtgaattgaaataaatggttcaggatggtggagtactaagagtaagtttaatagtatagccaactattagctccaaatcatctatagtcaattcatacaatacttaactacaaatatatactccctccatcccataatataaggcgtgcacgcatttcaagattcaacctttaaaacatttgaccaacacttagtataatatgaaataaattttatttgttaaaaattatatcattagattgagatttaaatttactttcaaatggttataattttgttgctacaaactttataatatatgagaaattataagataaagattagttctggagactctgccaactttggccgcgccttatattataggatagagggagtactacatcattaataattggtcccacttgtcatacacacatagcgtcttgacgtccgtgctgcggctaggtacaaatctgtagctcgtttctcttctctctcatcttttgtatcctccacatgtgcttatagttgacttatagtcctttattgtacctactctaagtgtacaacttctaagaattatgctgccagaggatatgcttttccgttcaacgaaattcattgaatggcaccatcactggaaggcatctcactggacctctcacatgtagtaacatgtgtgttggtcagtaatagaaccaacaattaattccaccaaacaacaacgggaatatcagaataataagtaaaacgccaaaataaaataaaaattatcaaacttaatcttgtaacgtcggatatcattccatgcaactaacgaaacaaatccctgccatctcatcccattcaacttcatctctccaaccaaacaagcccatgtgatgtgctgacactagaaagtgttcatccagaaaattttattacatataatgttacgtagagctttcaccacgctctcatgtaggtccttgtcgtcacaacttacctgaaattatgtataaccataacttatgttacacaattccccctcaggttttataagttatggtttttgaatccataaggttatttctgctgcattattttgtttcaagaggaaatgtttggaatttgtcataaggaggtggtatcaatgtatatcttactaaaagagcaaaagttcctcctgcaaccataatttggcatgatcggcttcaggacacttgtccggaaattctacatgaccagtaaaatctgagaacagttatggatccatgaacttcactggaacacgctatggtttcttgacgattttgagaggagatgaactatacccaaaatatccatagtctctgttttatactccctctggtcattaatatatgacacttttaacactaaaatactaattttagttttaaaaatgtcatgtattaatgaacggagggaatgccatatctaggcatgccccatgtgcctcatatattaatgtttcattccaaatgttcttgggctcaagtaaaagctgccatttgaaacccctcttgttgatctctaatatttcaaaatggtaataaatacatgttgtgcagcaaattttctgtaacatatttggttttattaatgcagattttctaaagggaaaatgtatgcatctctaaagtttgtgcttttcttccccttttttattttgtcatagatggaagaaatcaaggaggctccagtgtatccaacaactaatgtgtctcaaacaacagccacgagagcaacaactgtcttccaacatggagcttctaagccaactactgggttgcccatgaatatttcagctgttgcctcattccctgtcacaaccccacctactataccatccccaaatatcttgaagcagacacagttaaatgaatcaccatcaggagtgaaagcagctggtacctcttcaattgtttcagtaccatctgttggtcctacaaatattaaagtggaaaagggtgttaatagtcctacttgcacacaaaatggaggtattataaacatattctttcatgactggttttcttacagtatcaatgttataattgttattcctattcattatctatgagtattaggtttcttgcttgaattaggacatagtgcttaatgttttatctcgtgaattttgtgtaaattttataaatactagcacagcacatgtgcgttctgacagatgataaataattgtgccatatgatctaactaaaaaatgaaacaaaataatctacatggtatcaattagttaccgacatatttgtgtgaacaaagtaatttttttagaaaggatcatgcaaactgcacaaacgggtcatagagcacaccatcactcccaactccgctttttgaaagagtgaagattatccccctcatactcatattgttaatatcatgcacaaaactacagatttaagttgagtaaatagcttataggaatatggtctggtatttctcagaatagttactcccagtagtttatacatttttaatgtacatcaattgacttctttattttaagtgtttgcctagtcagctgactagcctaactagtcactagtcagcggcaaaccgacctggctcctgaacatagggtaatcggtgggttggtcggcctaattggtcagttcttagtctgtgactagtcttttgtatttctttggcagccgttttgtactaaaccctgacctaatgggcttaattgagtccttttggactcttttccttcttaatataatgatgcgcagcctgcgtgtttgagaaaaaaattaggcaggccaactaaaagatagaaaactggcatgggctgaaatttttgggcccaaaggcactggctgggggtggagataactagggttagacttgactccataaatccccctggctcctctggctctctcacttcctctttctgatcccacccgccgacttgccccttcccatctccctccatgctggccccgcgtgccggcgcccctgtttgtcctccgggcgtgcaaccgacaaccctgctgggtttccttgcaccagccccatgctgccccttctggtattcccctcacccagacccatgccccgacgtgctcccctgccaccagttgcagtgtgtgcggtttgaatttttaaaatcgaaatgtcaaatctcagtttcattctttcaatggtctccaaatatactatgaaacatgtcaaaagtaactagctgcttgtgtagaaaatttactgttggctatattggaatcatcgactagtcagcctagtctccagtaggcgaggcaccaaaaagcgactaggtgaacactattacttgtgtcttaggtgttctgcaatagtcatttacattttcaatgtataatttgtatggtgtacattgcatttgaaaaggaagtaaaaccatttggagcttaatagcagttctatttttcctcatgttcctcccaaaggtttatgtcccactttaatcagctattcagaagtttattttatgctttaaataaaattactgaaatttgacatcttgacaacaacatgattgccagtctgggaatgttattcatccttttagttatgtacttctctgaagtcctctgtgatgattgtgaattgttgctggtcctctctttatagaatgatcccagtccaactcttagaaaaagccacaaacacttccacaaatcctcatgtgctccaggggagaaatgtggaatggacaaataaagtaacttctttattgtggaatacttacaccatgccattttgatgattttagtttcatattggtcatctttgatcccctgactgatttgcctaagtcacctgtcactgcagcaactataggtcaagcaaataaatcagctcatcttacagcaactatgtctaatccaaatatagtaccttcttccagtcatgaagggacgcctcagcatgaaaaggcacctgtaattcgacccatcaccgtaaaaaatggtatgacacatcaatctcgacctggagtatcatttattcagcgacaatccacctttcccaatcatagtgcaattgcaaaaacggttcaacaagttctgcatcaacctgtcaatcatcctaactggatcccaccatcaactgagtatatgcgtagtgggctaggttgtcaagtatgtaaagtttttatcatcgacatacatagtatgattatttgtgatgcttgtgagaggggcatacacttaaaatgccttcagcatgacggggtcaatgttctaccacctaaagctgagtggtattgtccaacatgtgtagctcgtagcaagggaaaacccctgcctccgaaatatggcaaggttacaagaactgttgttgcaccaaaggttaatcttattagtggagttccttcgcagggagtttctgaaaatcgaactacaaaggataataatcaagaacttgcagcagatggaacagttatcgataaaaactccagtgaagctaacaggattgtacataatagtgataagttggctttggagagttcaaaagaacaatcacaatcaggctctgcttctgcagctgttgataagggaagaggaaaacctcaaggtgtgggaacaatggaaaataatgccatttcagaacgtggcaatgttcatgagttgacatcgaatggggatttatctacaaagaatgaaattgttataggcgatgctaaggataaaactattgtttgcagcacagatcacagtattgtgggttgggttggtgatcctctcagagtagtcgagaacaagacttactattactcttgtaacattgatggtatagcatacaatcttgatgatcatattttggttgcctccaaagataaggagtctgctccatccaagctgcaggtatctttcctcttaatataccctacatactcttgtatgatatggggcgcaaacccctctgcgtactggggtgtttgagtaaccgccccctatgcacctgtcagatcatcttgtggtagactttgtaagtgtattatctctaaaatagtcaagttattgttaccttttgcagtcactgtgggaagagcatgattctaggtctaagatggctttggttagtccatatttctttgcttcagatattccagaattgatcagtaaaccatgcactgcagaagagaatgaggtgagccaactaaccattgtgaagaatatataatctgtttaggaggattgcttttggctaggggaagtatgtaatttgcattatcaatagttcttttaaatagcatgaaaaatctatgtaattcacatttggcttttaaatagctgattgttaaatagtagatttttaatctgcagtgctggaaatctcgtgtatcgataaattagattagacattttttatgcttctcttgtgtggcaatatattgccaaattttcacggtgaggaactgattgttcttgttgtgataaatcataaatgagaataacttactacatttctttgatggtgttatgttcttccaggtatttgcttcctgtaatcaaagaactgtaacagtttccgcgatttgtggccaatgtgaggttcttcatgttgacaagtttagagaagaaactaagggaagtcaggttgtcagtagtaggctacatccaattttcctctgcaggtttgtctttttgatgctttgtcttaaattagtgggtgaatgatgagttaaaatttgaaatcaaatcctttaaaaaagttaatgttaactaatatacatttgttggaacctggctgtgcaaccaacccattgggcagccacagccctgccttacttggagaaaatagtagacttggcttgcaggagtcacactattaaaatagaaattgtgtatcatgatcttttttatgtaacaaacatttgaaacttgtattatctaatacatcatcctacttggccttaattcatgtcaatgcatatattgaatacagtaccgaactaccaaacataaaggccacttcctccagggtcattcaattgtcaaaatatttttttctcaaaatgtgacaaagggcaaaagatatttgtaatacacttcctccagggtcattcaattgtcaaaatatttttttctcaaaatgtgacaaagggcaaaagagatttgtaatagttgtccaaatttttcccttcatacaacctagtcatataagactattgtaaggttagaaggcgagttagtaacacgcaggagtgttactagcatatctttttttaaatgaattagtaacacaaattatagtaagaaatagttgcagctaacaaattatttgggatccaagtcaaggattgatcggagcacatagtgatcttgtctactctgcttgattaggattcattctgccagctaagattgtttggattgtgatccaaatggtaaaatctaccgtctgaatcaaaatcttgactcgtaggttccaggaaaactaggtttgtaagatcatagtgtaatgtacgcgttcgaccattccacatgtacgttctgctgctttccagtacatgggcctgtgatgtggtcaggtgtagggctgtcaacgagccgagctcgagcgagcttccatgtgtaggctcgagctcgctatagactcgagtcgagctcgagccgagcctaggtttgtcacgagcttgaagttgagctcgtgctcggctcgttcgagcttcgagcttctctcaagcctgcttcgtgcggtagaatactggaacaattcatcccattcaaagaaaaagctaacactgtgatgcatgattagatggctaaaaataatatactagtgctcctatgtatactagtgcaactgtgcaagccgcacactagtactcctactagtacacactagtactcctactctcttgttgggaaatgggacaacaaatgcatagtgctccctcctgccctgccactgctagtacatgtgcagttgtgctactccagtactactcctactagagaatttgaagagtaagagagagagagggggaggaaatgcctaggagaaagaacatgagccagacgttgaggctcgccgagttattcgagctcggctcggtaggctcgcgagcttaaagtcaagctcgagctcgatttgattcttagacgagccgagctcgaatcaagctcataacgaatcaagctcgagtagctcacgagtctcgagcatttttgacagccctagtcaggtgcaacttatgtatactactgcgcacaaaatttttgtacccctttccacatagcttgcgctcaagcagcagtaagctgcatggttgaaatctttgtgcatacaagagtatctgttggcaacttgtcataatatcttttagtagttgaatatatttgtggttgaatatttcctcatattttagtagtgagaaggcaacttccaactttgcaaactttgattaatgtctgttggaatccattttcagaacccagtggtttctgttcagagtaattgcttataatttttgttcattccgactggttcagtttatttgttgtgctcaacaaactttacataatctgctctctgcaatttatttgacaggtggaagtatgatgaatcaacaagcagtttcagtagtgtcaataattagatgagattctgtcattcttttgaatcacaactgtacatttgagatgctagtatcagctgttttgcctagatgtttaaacgaagtgggaagaaagctacaccccttggaaaaattttatgcaagttggagagcagcgagtccatgttccttcaggcgttcattacctgtgcaaatcttcgctgctttaattaggttcacccttcttaacagagtagtggtgaggctcgttacagtcaaaatctatgcgtgaaactttatacacgtgtttgatgcaaacatccaatccaaacgttcctctgtaaaacttctctcagcggtttacttgccgttctttctttc</dnaseqindica>|
| |
| − | Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001064013.1 RefSeq:Os06g0309000]|
| |
| − | }}
| |
| − | [[Category:Genes]] | |
| − | [[Category:Japonica mRNA]]
| |
| − | [[Category:Oryza Sativa Japonica Group]] | |
| − | [[Category:Japonica Genes]] | |
| − | [[Category:Japonica Chromosome 6]]
| |
| − | [[Category:Chromosome 6]]
| |
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Annotated Information
Function
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Expression
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Structured Information
