Difference between revisions of "Os05g0347000"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os05g0347000| Description = TAFII55 protein conserved region domain containing protein| Version = NM_001061800.1 GI:115463330 GeneID:4338489| Le...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os05g0347000|
 
GeneName = Os05g0347000|

Revision as of 20:08, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os05g0347000

Description

TAFII55 protein conserved region domain containing protein

Version

NM_001061800.1 GI:115463330 GeneID:4338489

Length

2487 bp

Definition

Oryza sativa Japonica Group Os05g0347000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:16321884..16324370

Sequence Coding Region

16322037..16322194,16322776..16322836,16322932..16323051,16323130..16323263,16324087..16324216

Expression

GEO Profiles:Os05g0347000

Genome Context

<gbrowseImage1> name=NC_008398:16321884..16324370 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:16321884..16324370 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggagcagttcatcctccgggttcccccctccgtcgcggagcggatcgagcgcctcatgaacgaatccgccgccgcctcctcctcttccaaccccgaagacgcgtccctcgacctctccttctcagaggatggaagaaatggcacatttatgattgggaatgaaagctttcctgcatcactcttggatctcccaactgttgtggagtcatacaagacatatgatgattcagtgctaattaaaacagctgatattggtcagatgattatggtaagagaagaagaagatcctgctccagaaggagttgaatacaagcatggtcttactcctccaatgagggacgcacgcaggcggcgtttccgcagggagcctgatttgaatgccgaacttgttcaccgagttgagaaggatctcattagtattatgcatggggtatctatcaaccagaatgccagtgcaattctaagggcaggagaaggtggcgatcgtaagaaagcgggaccagctccagcaaccaaacctaatgtcaaacaacctgctgcaaatggcgaagaagctgaggcagagaggagtgactctgatgagtccgttgacccgtag</cdnaseq>

Protein Sequence

<aaseq>MEEQFILRVPPSVAERIERLMNESAAASSSSNPEDASLDLSFSE DGRNGTFMIGNESFPASLLDLPTVVESYKTYDDSVLIKTADIGQMIMVREEEDPAPEG VEYKHGLTPPMRDARRRRFRREPDLNAELVHRVEKDLISIMHGVSINQNASAILRAGE GGDRKKAGPAPATKPNVKQPAANGEEAEAERSDSDESVDP</aaseq>

Gene Sequence

<dnaseqindica>2177..2334#1535..1595#1320..1439#1108..1241#155..284#atctgcttccggcgacactcagactccctccaccgcagccggcgaggcgacccccaccccaccctcgccgggattcaccgcccgctccgccactccgcaaccaagcaatcaagtcgctctcgcctggggacgaattggggtgggggatttggggatggaggagcagttcatcctccgggttcccccctccgtcgcggagcggatcgagcgcctcatgaacgaatccgccgccgcctcctcctcttccaaccccgaagacgcgtccctcgacctctccttctcaggtgctccccgccgcccctcctctctttaccctccatttttattttatttaccttttccgtctgccccttatggtgttcggcgaaatgcgcctggcgtttctttcgcgcgaggtgtaggtggagagtcgccgatctgtgcctgttggcactgtattaaggaagaatttgctttccagcttatgtagatacatagataaccatacgcatagggcaatcctatatacgctctgtgcctgttcgcactgttttctatatggcaatcggtagataaccataaccataggcgtaggatgtgagcagcagatgtcatatttaaaaaatacatgatttagggaatgcaaatgatagccacaatttaggatgtttggagaccttatatcattctgttaacatctcccttttccaaaaatttatatagccagggttgtattctcagttatgattaaccttccacttagtccaacactccaactgcctaataatgccctaatcatttgtggaaacataaaaaatgacttaagtaattataatttcaagtgtttaggccttctcatggtggcatggaatgttcttgcttgacaacttatactctatagatgctgaaactatggtttgtgctaatatgttctaaagtattctatttgtgcgtatctacacatatgtactttattcactcacttctagttgtgggttgaagacaatgttatctttatgtttgactgacacaacttaaattataataccctggtattgttatcaggatgtgaattttttatctaatatttgttgaacctgtggattgatggtatttttcatgctatagaggatggaagaaatggcacatttatgattgggaatgaaagctttcctgcatcactcttggatctcccaactgttgtggagtcatacaagacatatgatgattcagtgctaattaaaacagctgatattggtcaggtaaagcataggttttgtgtataagatctgttttattaactgtaggcttttaagactctcctgttgagattataacagatgattatggtaagagaagaagaagatcctgctccagaaggagttgaatacaagcatggtcttactcctccaatgagggacgcacgcaggcggcgtttccgcagggagcctgatttgaatgtattctgtgccttccctttagatctgttgtttttcatgttcacggaaacactttctcaatcataacggtgattgctcttcactcttttatgtaggccgaacttgttcaccgagttgagaaggatctcattagtattatgcatggggtatctatcagtatccttttggtttttgttgcttgcttatgttccactcacatgttgccttaattacaattgactcaacatcattttcatcatagtttgttccgttgaaataatcatacatgcaactagttactccctccatttcaaactataagtcgttttgactttgctcaaagtcaaactgctttaagtttgactaagtttatagaaaaaaaagtaatatttttaacccaaaacaaatatattcaattataaatttaatgaaactaatttgatgttataaatattactacatatatataaaagtaatatttttgacccaaaacaaatatattcaattatatatttaatgaaactaatttagtgttataaatattactatatatatccacaaacttagtcaaacttaaagcaatttgactttgagcaaagtcaaaacaacttaatataaaaatggagggagtatgtaactgcatttggttcactacttcactggttgatccattctatgccatgtttatatataaaaagtttttttcactatttgtgccctatcggcatatatgcaaaatgccttgactcggttgatagaccagaatgccagtgcaattctaagggcaggagaaggtggcgatcgtaagaaagcgggaccagctccagcaaccaaacctaatgtcaaacaacctgctgcaaatggcgaagaagctgaggcagagaggagtgactctgatgagtccgttgacccgtagaattcaagtggacaggaatgataaataatcctgctcctatgcccgagcacacccagttgacttagcagttcatatcacagggaaggttactatgtacggacttgctgtcactgttacggcatgttaatatttgtgtatgtaaaatttgatgcg</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0347000, RefSeq:Os05g0347000