Difference between revisions of "Os05g0349000"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os05g0349000| Description = Conserved hypothetical protein| Version = NM_001187446.1 GI:297724022 GeneID:9268044| Length = 3679 bp| Definition ...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os05g0349000|
 
GeneName = Os05g0349000|

Revision as of 20:08, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os05g0349000

Description

Conserved hypothetical protein

Version

NM_001187446.1 GI:297724022 GeneID:9268044

Length

3679 bp

Definition

Oryza sativa Japonica Group Os05g0349000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:16446969..16450647

Sequence Coding Region

16449628..16449987

Expression

GEO Profiles:Os05g0349000

Genome Context

<gbrowseImage1> name=NC_008398:16446969..16450647 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:16446969..16450647 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggacgcaacgtctatgatgggtgctgcctgctttgatgtccagcgtgcgcagctcttccctcggaacggggctgacgtgacacccaccaagagttcggcgtcgggaacaagtggcaccatcaccaaaccagtagctgagagcaccgcagttgcagtagaacacgtgttcccagccaccccggcctcatctgcacccttaatttcatcgacggccatgatgacaccgatttccctcaccatgaccaaggaggctgatgctgacatgggcaaggtaattttaaaaaaaaacaactccattgtagaatttacattgattaatagagttattgaaaaaaaatattccatctcaacaaaataa</cdnaseq>

Protein Sequence

<aaseq>MDATSMMGAACFDVQRAQLFPRNGADVTPTKSSASGTSGTITKP VAESTAVAVEHVFPATPASSAPLISSTAMMTPISLTMTKEADADMGKVILKKNNSIVE FTLINRVIEKKYSISTK</aaseq>

Gene Sequence

<dnaseqindica>661..1020#atgggcgttgggcctctatgtgggctgcctgattgggccctctcggctgggagagtggctgactgctattgtcccatgggcggatcgatcaagattcaagaactgaactcttgattctccacctcaaaatctggttctctgattctctacccctctgatcccctgtttcttgctaatctattgcttattcccaccttacacttctatttcccccaatttctatcctcagttactaagtatttgcatttggaggtggatttatctcttgtgcttgtgcttgatttgttgagaattaagcgggttcttgacaatattgtatcagggccgtcgatttgtggggtttctggtgttgagatggtgtgtgatagcaccgatggccagagaagcggtcaacagcttgatggaggtgcttccgaacgtgatgcccaccacctgttcggtgaaatgccgagccaattgggacatgactcaagtgctgttcttcacgtcgctgtgagccatggtctattcccggtgacccacgaggtgcttagtcaggtctatgacgcctatggtgcagtggcagtgcaggtgcttgccgtgagcttggggcattgaggctctcatctgattctagactctagtcaagctacgacaccgggaaggttcggtctgccactaatggacgcaacgtctatgatgggtgctgcctgctttgatgtccagcgtgcgcagctcttccctcggaacggggctgacgtgacacccaccaagagttcggcgtcgggaacaagtggcaccatcaccaaaccagtagctgagagcaccgcagttgcagtagaacacgtgttcccagccaccccggcctcatctgcacccttaatttcatcgacggccatgatgacaccgatttccctcaccatgaccaaggaggctgatgctgacatgggcaaggtaattttaaaaaaaaacaactccattgtagaatttacattgattaatagagttattgaaaaaaaatattccatctcaacaaaataacgcagttactaatcttctaggtatggtagatctcagaaaaaatggagattaagagctatatctctgaatgttcagatttggttttacctccggttatagtactaaatcaatgaagattgttaactcgttagttcagctggcctctaattatctgaaattgttcaggcattgacctttgcatatctctatctggttccccttctttgatttactagttccctgtggaaaacagcagacaaaacacacaaaaaagtgtcatgcttagaacatgtggggactcaatgtctaaaaaaaaaaaatcagttttgtgtgttttacctcaatagtgcattactgaaaactttttgacgaagaaggtagagccagctctaccttatagtcatttcattaatagaaacgagattcaaagttacaagattttaggttaagtgagatagagaaaaggaaagaaacaagaagattacagagatacagggtgagaggaaaaataaagaaataaaataaaaaaaagggggtgggggtggatttacaggggtataaacagcaggctgttgcctatgacgcacaccaagattgaatttcgtggctagttcctgtgttgcttcgcagacaccatagctttagggtatcacagatttgttgtgtgatgttctgaatatggtccatgtgtctttcgaagaccatgttgtttcgcgatttccacagcgtgtaagcacatgctgcaaaccagattggttctaacctttttgttgattgggtcctgtcaatgactgcttggatgaagtcagagattgtttcagatctgttggccgaatgcataagtcctagtcttttccaaaggttgtttgcatttctgcatcttaggataatgcggtccgctgattccagggccaggcagattgggcagtggggatcattactccattttttgttgaccatattggctttggtatttaatctgtctctaaaagctagccacaggaataccttgcagttctgaggaattgtgtagatccatatgtaatcagccggattccaaagggatccatgaaaaagtcagcagtctataagcatttgccgttgagatcaaaggcttgggatacaggagttctcttgtgtctgctgtctctggagaggggcttatagtttgtaggttttgtaatagtgcttgtaactctgtttctgcctggtaggagaggttgggatggagttgtagctgccaagtattgtgactaaattgtgattcaactgcgcactctttgtttatggcaaaagagaacagaactgggtaggtatattccagatgttgtggcatccattggtctttccaaaatagagttgttctgccattcccaagctttacctgtgctactgagcttaggatctggaagtgagacagaattagcttccaggttggcgtgtcattgtttctgggcttcagttgaattgtgctctgtaaatatttctggcgaaaccatttggccattggatcgttggagtctgtaagtaccctatttgctaattttaaaatcagtgctgtgttatgtgccctcaagtctctgatccccaaacctccctgctgtttttgtagcagtacagtcttccaagccacaagacagtgacctccctttatggatttttctccttgccaaagaaaggcacgtttgatcttgtcaattgcttcaattgatttttctggccaaatacaacaggacatgtagtaggttgggattgccgagatgattgaatttatcatggtgagtcttcctcctttagatagaggcatccatccagccagatacttgtcgacctttgagatgactggtagcagcatattgtgtgtactttttgtggttgataggggtaatccaagatagctgcatggcagtgagcttgttgggcattgtagaatctgtgtcaccatttccttggattcttcagctaggtgtattggcaccaaggtgcttttgtggtagttgatttgcaggcctgagaaccttgtaaaagaatccaaaatctccttcagtgctgttgcttgatctgtttccccttttaacagaattagggtgccgtctgcgtattgtaacgttggtggtgccccgtcgatatctagagggtgttttaagacccctgtgttgtaggcttgctgaatcatcttttgaagcacatcggcaaccagaatgaaaagatagggtgatagagggtctccttgtcgaactcatcttttgtattatatatgttctcctttttgtccattgatgataatctgagccttgcctgaacataagagtgtcttggtccaaccaatccatttctccgggaaacctctcgtttcaagaactctaaacaaagcatcccagctgacagtgtcaaaagccttgtaaaagtccaatttgagaactaacattggttttttgttctttagggctgattgtactagctctgaggcgaagattagattttccgtgattgatctgcctttaatgaagcctgactgcatagggtcaatcagctttggtatttccttctgcaacctgattgtgatagttttgctgataagttttggtacactgtgcaatagtgaaataggtctgaagtctttaatctgaactgctgttgctatcttcggtaagagggtaatatatgaatgattaacacc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0349000, RefSeq:Os05g0349000