Difference between revisions of "Os09g0540800"

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(Created page with "{{JaponicaGene| GeneName = Os09g0540800| Description = Eukaryotic transcription factor, DNA-binding domain containing protein| Version = NM_001189035.1 GI:297727200 GeneID:...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os09g0540800|
 
GeneName = Os09g0540800|

Revision as of 21:03, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os09g0540800

Description

Eukaryotic transcription factor, DNA-binding domain containing protein

Version

NM_001189035.1 GI:297727200 GeneID:9271661

Length

1995 bp

Definition

Oryza sativa Japonica Group Os09g0540800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:22123789..22125783

Sequence Coding Region

22123789..22124493,22125670..22125783

Expression

GEO Profiles:Os09g0540800

Genome Context

<gbrowseImage1> name=NC_008402:22123789..22125783 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:22123789..22125783 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggacgacgaggacatgtgggcgaacacgagcagccccagcgcgtcgccgccgcggccgagggggttcatctccaccgcgctgagcctcaactcgacgcacctccaaggcctcctcccgtcgtccttcgtcgacgccgccgcctcgccgtgccacgccagcggcaacaacaacggcggcggcgacggccgcaatgccgcgccgatgtcgtccatcttcttcgcctccgcgtcgtaccaccagcagcagcaccacctccctgcccccgcgccgctcgacggcgccatcctccccgcgcgccggttcgggctcgacatgtgcgccgccgccgccgccgcccccgccggtgtccccgccgccggggaccgccgcaagaggcggatgatcaagaaccgcgagtccgcggcgaggtcccgcgcgcgcaagcaggcccgcgtcaacaacctggagaccgaggtggagcagctcaagcaggagaacaagatgctccgcgtcaagtacgagcaggtaatccatccatggatgcagctagctaaaccctcatcaattcctatcgatcgctctgcttgctgctgctgctgctgctcgatcactgacaactttgcctctgcttctcctcctcgcttcgatccatctcgccgccgccggcagctgaggaagacggtggaggtgccggtgccggtgaggaggactctgcagaggggccacagcggccagtggcttgaaaagccttcattggccagattctctcagatgtctatctttgtaagccctagatcaggatatgtggccactctagaaagggtattgatgtga</cdnaseq>

Protein Sequence

<aaseq>MEDDEDMWANTSSPSASPPRPRGFISTALSLNSTHLQGLLPSSF VDAAASPCHASGNNNGGGDGRNAAPMSSIFFASASYHQQQHHLPAPAPLDGAILPARR FGLDMCAAAAAAPAGVPAAGDRRKRRMIKNRESAARSRARKQARVNNLETEVEQLKQE NKMLRVKYEQVIHPWMQLAKPSSIPIDRSACCCCCCSITDNFASASPPRFDPSRRRRQ LRKTVEVPVPVRRTLQRGHSGQWLEKPSLARFSQMSIFVSPRSGYVATLERVLM</aaseq>

Gene Sequence

<dnaseqindica>1..705#1882..1995#atggaggacgacgaggacatgtgggcgaacacgagcagccccagcgcgtcgccgccgcggccgagggggttcatctccaccgcgctgagcctcaactcgacgcacctccaaggcctcctcccgtcgtccttcgtcgacgccgccgcctcgccgtgccacgccagcggcaacaacaacggcggcggcgacggccgcaatgccgcgccgatgtcgtccatcttcttcgcctccgcgtcgtaccaccagcagcagcaccacctccctgcccccgcgccgctcgacggcgccatcctccccgcgcgccggttcgggctcgacatgtgcgccgccgccgccgccgcccccgccggtgtccccgccgccggggaccgccgcaagaggcggatgatcaagaaccgcgagtccgcggcgaggtcccgcgcgcgcaagcaggcccgcgtcaacaacctggagaccgaggtggagcagctcaagcaggagaacaagatgctccgcgtcaagtacgagcaggtaatccatccatggatgcagctagctaaaccctcatcaattcctatcgatcgctctgcttgctgctgctgctgctgctcgatcactgacaactttgcctctgcttctcctcctcgcttcgatccatctcgccgccgccggcagctgaggaagacggtggaggtgccggtgccggtgaggaggactctgcagagggtgctctccgcgccattctgattcttcctcctcatcgatctcctgctgctgctgctgctgctttgtgatgatcttggatttgtttttggagatggtggtggattagtagcttgtgttgctgtgatgatgcttaattagcagcaaagctagctaatccaggcatgtacattcaggtggacgaccttagctactatggttactactactacttagacaagtggcagtattaagctttgatttgctcgcaaacacttgccttaattaatctgtacagtgttggcagctgctagcttagcaattagcaaaatgcattattataattagtcccctaggaggaagcttagctgtggcagtgctaattgccttgctatgtgttttggtgtttgctgttttctgttctacatgatggtggtagtaatggcctacagcttgtcgcatggtattaggcagaaagatgagctgcttgtacaaatttggcaactattgcttcctggaacaatgacattttgggcctcaggagaggaggaaagagtcctctcttctataaacactcttatcatgaatcgatcaatatgcatgggtggattaaggattggaattttcttcatctcccttttggtccctattgtgcaatatgatcctgatgcgttttgtttgttcccatgtcgttttctcctcctcctacatgcaaacccaactagtacttaaaagaagaaaagaagaaaaaaagttgaaatgttgtaatcacattctctagtgttgtgttgccatgccgagaaatttcaaatgatgttagttggaactgaactcgtgtaaaattcctccgttccaaagaaaccacgagtatcccatttccgtatggcatatatagaaatttcacatgaagcatgtcaattctataattttctcaaaactaacattattccaaccccaaaaattcacgataccaactctcctatactactcgaaacgaagaatttctctaatggagatgatgtatgcagatgtttgactaactttcagtcctaaaaaaaaagtagctttcttttcgacggttttctgtaatttcagtagttagataagataacgacgttggcgcaagtctttcttgcactggatttttttgttgtgacatttctagctaaaccaccggtttttctctgtcctgctccacagggccacagcggccagtggcttgaaaagccttcattggccagattctctcagatgtctatctttgtaagccctagatcaggatatgtggccactctagaaagggtattgatgtga</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0540800, RefSeq:Os09g0540800