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| Line 20: |
Line 20: |
| | | | |
| | ==Structured Information== | | ==Structured Information== |
| − | {{JaponicaGene|
| + | [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 6]] |
| − | GeneName = Os06g0589300|
| |
| − | Description = Viral coat and capsid protein family protein|
| |
| − | Version = NM_001064495.2 GI:297606097 GeneID:4341405|
| |
| − | Length = 7822 bp|
| |
| − | Definition = Oryza sativa Japonica Group Os06g0589300, complete gene.|
| |
| − | Source = Oryza sativa Japonica Group
| |
| − | | |
| − | ORGANISM Oryza sativa Japonica Group
| |
| − | Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
| |
| − | Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
| |
| − | clade; Ehrhartoideae; Oryzeae; Oryza.
| |
| − | |
| |
| − | Chromosome = [[:category:Japonica Chromosome 6|Chromosome 6]]|
| |
| − | AP = Chromosome 6:23982231..23990052|
| |
| − | CDS = 23982560..23982859,23983348..23983436,23983561..23983666,23983761..23983889,23984386..23984470<br>,23984577..23984686,23985007..23985207,23985616..23985977,23986195..23986278<br>,23986374..23986499,23986582..23986744,23986961..23987119,23987730..23987857<br>,23987954..23988073,23988338..23988482,23988575..23988651,23988901..23989279<br>,23989908..23989994|
| |
| − | GCID = <gbrowseImage1>
| |
| − | name=NC_008399:23982231..23990052
| |
| − | source=RiceChromosome06
| |
| − | preset=GeneLocation
| |
| − | </gbrowseImage1>|
| |
| − | GSID = <gbrowseImage2>
| |
| − | name=NC_008399:23982231..23990052
| |
| − | source=RiceChromosome06
| |
| − | preset=GeneLocation
| |
| − | </gbrowseImage2>|
| |
| − | CDNA = <cdnaseq>atggagccctcggcggccgtcgcgtcgaggccaccgagcttcaccgcgcagacgaatgccctcctccgcaagaatctcatcttccagaaacgaaacaggaaaggaaccattcggctaatcatagttccgatatacctctgcctcttgctcaccattcttcagagagtcatcaacagcgttcttgacaagcccaagttcagatgtggttgcaagtgtgttgatgtcaacggcacaggctcttgccaaaatgtgtgtggaattcagtactctacactggatcaggctggcagttgccccataccgaaccccccggaatggcctgctctcttgcagttaccgcgccctgagtatcgcgccatgcaggaatcctccttgtatgcaggtttcccagatgtatcatgcagaaaatcacaatcttgcgcagctactatacccttcacaggagcaaatgagaccctatctaacattgtcatgcaaaatttgttcacaagctcaccgctttcaaatctttctgataatgcgagcatatccagtcttctccttgggacagatgtaccgggtacttatacaggcttcattgaacccgcttttgtctcagatcgacccatatatgttcttagacctcaatgcaaagccagtgattcagttacagtccccattacgtttggtgatattaatattcggaaagagatgttatgtattcaaggtttacccttgtggaggaatagttcagcaataataaatgaggaaaccttcaacggctacaggaaagggaaaagtcaggaagggataaatgagattccaatggcctatgatttccaagactcaaacgagaagcatttcagcgtgttagctttatataactcaacttatcagaatgtgtcttatgttccaatgccatttggacttctgcatatctcgcgctccttgaacgcggtctcaaatgcatatctccagtttcttcgaggatcaggtgtaaaaatgttgcttgcattcacaaaagaaatgcctaagcaagagactcgtttgagatttgatttttcttctgttatcggccctctcttttttgaatgggttgttgccttgcttttcccggttatgttgacataccttgtatatgagaagcaacataagctccgaacaatgatgaaaatgcatggacttggggatggcccttactggattatctactatgcatatttccttattttgtccatggtgtatttggttctatttgtcgtttttggatccgttataggtctaaactttttcaagataaatgactacagtatccaatttgttttcttttttagtttcatgaacctgcagattgtactagccttcctaactgcaaccttcttttctaaagtcaacactgctcaagcaattgcatacctgtacatatttggatcggggttgattgcaggatctcttattcgcaattttattgaaggtggcaagttcccaaagcactggattacagttctcgagataatacctgcattttctttgtatcgaggactatatgagcttggccaatatgctattagggcttctgaagctggaagtcatggcatgagatggagtgatctaaatgaccatgcaaatggaatgagagatgcgctgattattattattctagaatggttggttttgcttcctgttgcgtactatttggaccattctgcttcagttggacacaaatctagtttcctttccctaataaaaaatctgctgaagaagaacccaacttggagaagggtatctattaacgaagtagttaacgacgctgttcatgtagaaatggtgaagcaagatattattaaagaaagggaaactgttgatcaagtactacaacaacagagtagcggctatgcagttgtctgtgatgatctcaagaaagtatatcatggaaaggatggtaatcctgataagtttgctgttcggggtctatcacttgctttgccttatggagagtgcctgggcattcttggtcctaatggagctggcaagagctctttcattagcatgatgattgggcttacaaggccaacatccggaaatgcattcgtacgggagttcagcatacagactgacatggaaaagatatataacagcatgggggtttgtccacagaatgatatgctctgggaaatgctgaccggcagagaacatctccagttttatgggcggctgaagagcctcaatggctctgatttggacactgctgttaacgaatctttaagaagtgtaaatttacttcatggtggtgctcctgataagcaagtcaggaagtacagtggtggcatgaagaggcgtctcagtgtagccatctcgctgattggagatgctaaagttgtctacatggatgagcccagtacaggattagacccggcttcgaggaagagtctatgggacgctgtgaagcaagcgaagcgagacagagcgatcgttcttactacccattccatggaagaagctgaagttctctgtgacaggttgtgcatcatggtagatggcagcctccagtgcattgggacacccaaagagctcatagcgcgatacggagggtactacgtgctgacaatgacaacatccccggagtttgagcaagaggtcgagaatctggcgcgaaagctctcaccgaacgcgaggaaagtataccatctgtctgggacacagaagtacgagctgccgaagcagcaggtgaggatcgcggatgtgttcatggccgtggagaatttcaagaggaggacggaggtccaggcgtgggggctcgcggacaccaccatggaagacgtgttcgtcaaggtcgccaaaggggcgcagtcgagcgaagaactctcatga</cdnaseq>|
| |
| − | AA = <aaseq>MEPSAAVASRPPSFTAQTNALLRKNLIFQKRNRKGTIRLIIVPI YLCLLLTILQRVINSVLDKPKFRCGCKCVDVNGTGSCQNVCGIQYSTLDQAGSCPIPN PPEWPALLQLPRPEYRAMQESSLYAGFPDVSCRKSQSCAATIPFTGANETLSNIVMQN LFTSSPLSNLSDNASISSLLLGTDVPGTYTGFIEPAFVSDRPIYVLRPQCKASDSVTV PITFGDINIRKEMLCIQGLPLWRNSSAIINEETFNGYRKGKSQEGINEIPMAYDFQDS NEKHFSVLALYNSTYQNVSYVPMPFGLLHISRSLNAVSNAYLQFLRGSGVKMLLAFTK EMPKQETRLRFDFSSVIGPLFFEWVVALLFPVMLTYLVYEKQHKLRTMMKMHGLGDGP YWIIYYAYFLILSMVYLVLFVVFGSVIGLNFFKINDYSIQFVFFFSFMNLQIVLAFLT ATFFSKVNTAQAIAYLYIFGSGLIAGSLIRNFIEGGKFPKHWITVLEIIPAFSLYRGL YELGQYAIRASEAGSHGMRWSDLNDHANGMRDALIIIILEWLVLLPVAYYLDHSASVG HKSSFLSLIKNLLKKNPTWRRVSINEVVNDAVHVEMVKQDIIKERETVDQVLQQQSSG YAVVCDDLKKVYHGKDGNPDKFAVRGLSLALPYGECLGILGPNGAGKSSFISMMIGLT RPTSGNAFVREFSIQTDMEKIYNSMGVCPQNDMLWEMLTGREHLQFYGRLKSLNGSDL DTAVNESLRSVNLLHGGAPDKQVRKYSGGMKRRLSVAISLIGDAKVVYMDEPSTGLDP ASRKSLWDAVKQAKRDRAIVLTTHSMEEAEVLCDRLCIMVDGSLQCIGTPKELIARYG GYYVLTMTTSPEFEQEVENLARKLSPNARKVYHLSGTQKYELPKQQVRIADVFMAVEN FKRRTEVQAWGLADTTMEDVFVKVAKGAQSSEELS</aaseq>|
| |
| − | DNA = <dnaseqindica>7194..7493#6617..6705#6387..6492#6164..6292#5583..5667#5367..5476#4846..5046#4076..4437#3775..3858#3554..3679#3309..3471#2934..3092#2196..2323#1980..2099#1571..1715#1402..1478#774..1152#59..145#accaccagaagcgagagaaagaaaaccgaaatcacgcgaaccgccgccgcgtgacgcgatggagccctcggcggccgtcgcgtcgaggccaccgagcttcaccgcgcagacgaatgccctcctccgcaagaatctcatcttccaggttcggatccccctttttccatccagccatttctttcctcttcgccttaactgctatgatctgtttggtactcggatgagtcttctttgttgttctgatgatatgccttagggaaaagaggaaactgcaagatggtcagtacaaaatttcacttgttgtttttttttcaaaaaaaaggaacagcaaaatttcggcataatttgctagttttcgttgttcttgaagtgtaggcgtcaacttgttctggtgaagtcgtgggcttgagttatgtttattcagaatattctcttgtcgtcgttgttgactttttggcatggccgtcgtcccttgatttatattgatgtcaaaatggaaagaatttgggaccaatacgcatccatcagcataggtgaatttccttgatcgtttgaattatagatgtttggaacgcgaagaggcgcactgaaatcccttttgtttttgtgcttcatatttcacttcgatggctgtttctgtagattattagtgtcaactgtcaagcgtcttttacatttcacacgattgcaattcgttttttattaattgcacaaactggtcgttgagtcaagctaattaagaagtggcatccatgtttgatcgtttcttgcagaaacgaaacaggaaaggaaccattcggctaatcatagttccgatatacctctgcctcttgctcaccattcttcagagagtcatcaacagcgttcttgacaagcccaagttcagatgtggttgcaagtgtgttgatgtcaacggcacaggctcttgccaaaatgtgtgtggaattcagtactctacactggatcaggctggcagttgccccataccgaaccccccggaatggcctgctctcttgcagttaccgcgccctgagtatcgcgccatgcaggaatcctccttgtatgcaggtttcccagatgtatcatgcagaaaatcacaatcttgcgcagctactatacccttcacaggagcaaatgagaccctatctaacagtaagtaatctgtagttctgtaccatctacttctttaaacctgcctcaaaatccacttaggacccctttagaaaaatgcttagggcttgttggatgaagaagtgaggcatgattctcttattatttttttgttttcagtaatgatgaaataatgattatatgacttatctgagagaaggaaaatctgttaagctgtagtgtgttcaccatattccataatccactaatttttgcccatttgtttggcagttgtcatgcaaaatttgttcacaagctcaccgctttcaaatctttctgataatgcgagcatatccagtcttctccttgtaagttgaaataaccatattattacttgtatggctacttttttttaagggtgaacatcaaagaacttactctattatcatgtaacttccaggggacagatgtaccgggtacttatacaggcttcattgaacccgcttttgtctcagatcgacccatatatgttcttagacctcaatgcaaagccagtgattcagttacagtccccattacgtttggtgatattaatattcggaaaggtaaaattcttattatgtatcgcttctactgtttctgagtagattaatctgaaataacaatgttggcaaactgatgaggttgtcagattattaacctgataccatgacagacttgtgattgtcattgtttgccataagaaccatcaacctctgtgcactccttcaatgacattctgcatattaccgtttatgtgcctcttgttttgttgaatgtttttggttgaaaatgacttaatatctgaacttcaaattctgttttagcagagatgttatgtattcaaggtttacccttgtggaggaatagttcagcaataataaatgaggaaaccttcaacggctacaggaaagggaaaagtcaggaagggataaatgagattccaatgggtatgcaggcatttcttacctatgccattagtttattattgcatcatatgctggcattaaaggtgcaaataactctaattacttctgttattacagcctatgatttccaagactcaaacgagaagcatttcagcgtgttagctttatataactcaacttatcagaatgtgtcttatgttccaatgccatttggacttctgcatatctcgcgctccttgaacgcggtgggtctcacttcataaaattgaccttttattagggacaaccatagactagtggtagatcatagttgagataatgggttcaagttaccactcttcttgaaatcaaatatatctgtttaatttgtaaagtggatctctcattcttatttttcttgtctgccaacccactaaaaagtttgaaacatttttatatttcattctgcaatcatttatggttcataacaaattgacaagaagatccaaggaaacatgacatctgatgtgaaccagaatattcataatactagaaaactgtaggctgtaataatccaggagggtttaaaacttatgagcacgcataatcatgtgttttcggcttgttctctagtaagtatagtagcacattatgaatttattagggacaatacctttcttgtcctttttacactatagttttgaaattttctactctgtttagaatattgaaggatcaaaactgatcccattatcattatagtcatatcatacttctgaaaaatatctctaacttggcaatactattatgcaaagcagtcaggaagctatacaactcagttctaccaataacatatgtttctgggcatctgtgtaggtctcaaatgcatatctccagtttcttcgaggatcaggtgtaaaaatgttgcttgcattcacaaaagaaatgcctaagcaagagactcgtttgagatttgatttttcttctgttatcggccctctcttttttgaatgggttgttgccttgcttttcccggtaagtggcaacaaattgatagtggtcttcccttttgatatagtagctatgaatttgacttgttaactagtccctctcagggtttcttaatagttaatagtaagtaaaatattgatcctcatattagatatattgaagtggagaaaagtagagaactgttagaacaaatcatgatcagttttataattcatgatgaaaatttgagatttaatgcaggttatgttgacataccttgtatatgagaagcaacataagctccgaacaatgatgaaaatgcatggacttggggatggcccttactggattatctactatgcatatttccttattttgtccatggtgtatttggttctatttgtcgtttttggatccgttataggtaggaagctattcccaacggttattttcaacaatcattacttgatttgacccattttatctaactcagttgtaatttgcaggtctaaactttttcaagataaatgactacagtatccaatttgttttcttttttagtttcatgaacctgcagattgtactagccttcctaactgcaaccttcttttctaaagtcaacactgctcaaggtacaacaaacctataccatttatctccatatccgtgacctattctgtactgcaaaatatatgatgtttcttgtttcttatgttctttccaccagcaattgcatacctgtacatatttggatcggggttgattgcaggatctcttattcgcaattttattgaaggtggcaagttcccaagtaagtttagcaaatattaccaaatggatgtttttaacaatcacattaccttcatttgaatattatatcacagttttcactatgccatagcaaggcagcaacagtttttaaacataagtaaactagccatatgggatgcctttcctgctgctagcaatttattttgataaatggggctgaaataattgcacaaaattttcctgttgtgttactgcagagcactggattacagttctcgagataatacctgcattttctttgtatcgaggactatatgagcttggccaatatgctattagggcttctgaagctggaagtcatggcatgagatggagtgatctaaatgaccatgcaaatggaatgagagatgcgctgattattattattctagaatggttggttttgcttcctgttgcgtactatttggaccattctgcttcagttggacacaaatctagtttcctttccctaataaaaaatctgctgaagaagaacccaacttggagaagggtatctattaacgaagtagttaacgacgctgttcatgtagaaatggtgaagcaagatattattaaagaagtaagtttcttatagttcttatattgcactcatcagtctttcagacagttcaatctcccacctcaatgcatttttttttgaggggaaacactactagacttacccagtagttataaattttataaataaaaaagtccatatttacatgaaacagaaaagaggaaaaggaaaagaaacacacagcaaagttcaataaggtctgtaaatgcattgcaattttttacattgcaatttcaggattacctataaggctgcaatatttttcaacaaactactctacataattatgtatatcatccagtactaatttactatattcatttcttgggaatcacataaatctgcatatcagatgttacctactacttgatatctagtggttgctaattttttatgattggattacagagggaaactgttgatcaagtactacaacaacagagtagcggctatgcagttgtctgtgatgatctcaagaaagtatatcatggaaaggatggtaatcctgataagtttgctgttcggggtctatcacttgctttgccttatggagagtgcctgggcattcttggtcctaatggagctggcaagagctctttcattagcatggtttgtaatttgatccctcacacgacatacttgatccaaacaattgcctagtcattttctctttcttctgcttaaacacataaattataattgtaggatttcttgtccatgacgattattttttctttatagtattctcttttatctgttaatgttttatatatttctgtagaattaattatgctttattgaccatatttctagaaccactgaatgtcctttttaaaatcccgaaatttatagcttttgcgctttagttttctaaatcctattcggtgttctgtaataatctctgtttccttccaactgttgccttacagatgattgggcttacaaggccaacatccggaaatgcattcgtacgggagttcagcatacagactgacatggaaaagatatataacagcatgggggtttgtccacagaatgagtaggatatgcaacctactattgcagatctgttgtgtgcattagcacttgttcatgtaaaaacaccttcgaattatcaccttttgtttttgctatgttgaatgcagtatgctctgggaaatgctgaccggcagagaacatctccagttttatgggcggctgaagagcctcaatggctctgatttggacactgtaagttatatcaagtataccaggtcccttatttcttcttctgatagcataatttttaaggtgaagctagcatatcttaatatcaatgtactgtctttcaatacttatgcccgtagatgtgctttattatatggatttttatactccaaagaaaccttataggatttgaattaagaacaaatgagtggatgctcgaaagcactgaaccatgtattaagaatggaagagtgtttgaagcataaagtgtcaagtgcatgggttttcatggagcaaaatacttctctgaactgaaaaaatggatataatctagatagtcttccctgattttctccatcatccttttttcattttcatttgtcttgaaatattttcagtatgtgttttttgacacagtacttctaaatttactagtataatatactgaataggacgctttcctactatttctatttagaagcctttcagagttatttactgaaatgaaaatgatttgcaggctgttaacgaatctttaagaagtgtaaatttacttcatggtggtgctcctgataagcaagtcaggaagtacagtggtggcatgaagaggcgtctcagtgtagccatctcgctgattggagatgctaaagtacacctttctagctacagcgcttaccaacatcttcttgcgttgtgactcatcgataattccctgcttatgcacattcataaaatggcctcaggttgtctacatggatgagcccagtacaggattagacccggcttcgaggaagagtctatgggacgctgtgaagcaagcgaagcgagacagagcgatcgttcttactagtaatgttcaaactacataccaattttgaatatgatacactacctaccttgtgtttggacataatttctcttccatgattgaattaacacgcttccttttgttcctgtgacacatcttttgcagcccattccatggaagaagctgaagttctctgtgacaggttgtgcatcatggtagatggcagcctccagtgcattgggacacccaaagaggtttaatcatctcacaaacctacttcataatccaataaaaataactattggaagcattgttcctcgagaaattttatagtatttaagaaagtatatctaggtatcaaaattttacactaaaaattttggtacctcaagatacaagtatctaaaagtaccaagttttacgatagaaaaagtggtactcccttctttttttaatgtatgacgccgttgactttttaattaacgtctgaccattcatcttatttaaaatttctgagcaaatataaaaatatttaaatcatcctgaaagaacatttgatgatagattaagtcataataaaataaataataattacataattcttttgaataagatgaatggtcaaacgtatctcaaaaaatcaacagcgttatacattaaaaagggaacttctcaaggatggtaaaactatctttgttccttgcttcatctaaagatttaacacaaaaattttcaatgacagctcatagcgcgatacggagggtactacgtgctgacaatgacaacatccccggagtttgagcaagaggtcgagaatctggcgcgaaagctctcaccgaacgcgaggaaagtataccatctgtctgggacacagaagtacgagctgccgaagcagcaggtgaggatcgcggatgtgttcatggccgtggagaatttcaagaggaggacggaggtccaggcgtgggggctcgcggacaccaccatggaagacgtgttcgtcaaggtcgccaaaggggcgcagtcgagcgaagaactctcatgatgatctggtgcaaaaatgatgttttgtttgtgctgttctgatgtactttgtacagaaagtaggataaatcttttgtcaggcattagtttgcttatttttctgtacataaggatcctatggcatgttgtttttgttcaatcttcttttggtcttttgtagataaggtttgtgttattgtgtatgttatagaaaaaaagatggtgtgtgtaggcgtatattggtgattgtattttatatatgtttgtcaacttgttgctgcacgtatatgtctctgcaaagaatcataaacctttgaccagaagcctttgaattgatcatattctttgtgt</dnaseqindica>|
| |
| − | Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001064495.2 RefSeq:Os06g0589300]|
| |
| − | }}
| |
| − | [[Category:Genes]] | |
| − | [[Category:Japonica mRNA]]
| |
| − | [[Category:Oryza Sativa Japonica Group]] | |
| − | [[Category:Japonica Genes]] | |
| − | [[Category:Japonica Chromosome 6]]
| |
| − | [[Category:Chromosome 6]]
| |
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Annotated Information
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Structured Information
