Difference between revisions of "Os05g0374600"

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(Created page with "{{JaponicaGene| GeneName = Os05g0374600| Description = Heat shock protein DnaJ, N-terminal domain containing protein| Version = NM_001061909.1 GI:115463548 GeneID:4338607| ...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os05g0374600|
 
GeneName = Os05g0374600|

Revision as of 20:09, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os05g0374600

Description

Heat shock protein DnaJ, N-terminal domain containing protein

Version

NM_001061909.1 GI:115463548 GeneID:4338607

Length

3749 bp

Definition

Oryza sativa Japonica Group Os05g0374600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:18059457..18063205

Sequence Coding Region

18059494..18059523,18059637..18059842,18059941..18060010,18060481..18060687,18060837..18061060
,18061577..18061655,18061728..18061865,18062414..18062541,18062748..18062850

Expression

GEO Profiles:Os05g0374600

Genome Context

<gbrowseImage1> name=NC_008398:18059457..18063205 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:18059457..18063205 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagatgaaagcagaggcgctactgacgctacggaaatatgaagaagtcattcaactatgccaggaaacagttgtgttagctgaaaagaattccagtgcatctgaaactacggaatggtcagggaggctctggcggacatatctcatttgcaagacttacttcctttcaggcaaacttgaagatgctctcgagttgctaaataagcaccagcaagtgacaaatgtcaaagagagtgaagggagaacatctcaggaatgtttctcatctttgtctactaccattagggaacttctttcccataaggctgctgggaatgaagcatttcaagctcgtcgatactcagaggctgtagaacaatattcagcagcattggcacgtaatagtgattcacgccccttttcagctgtctgtttttgcaatcgtgctgcttcataccaagcactcggtcaagttactgatgctatagcagattgttcactagccatggttcttgatgcaacttatctgaaggcaatttcaagaagagccaccttatacgaaatgatcagggattatggacaagctgctaatgatttacggaagctcatatcacttattgaaaagcaagctaataactctggattgtcaccaaaagttttgaacaagcatagcgatctgaagcaggcgcgcacccgacttttatctgtagaggatgaagcaaaaagagatactcccttgaatttgtatttaatcttgggaattgaaccatcttcatctccagcagatattaagaaggcataccggaaggctgcactgaggcatcacccagataaggctgcacaattgctagtaaggaatgaaaagcctgatgatgggttttggagggatgtcgccaaggaggttcatgcagatgctgaccatctatttaaagcaattggggaggcttataatgttctttcagactctgacaagcgccaagaatatgatatcgaagagaatttaagaaatgctacaaaaagagtctccaagggagggaggatgcacaggtcccctgaacagcggtacaccaaacagtatgataggggttttaaccctcgtcccagcgtcttcttggtcctttcgtttggagagggtggatcatggagctgcaaggattggttggttgggatgatcagttttgacacttcggatgttgtagcttga</cdnaseq>

Protein Sequence

<aaseq>MEMKAEALLTLRKYEEVIQLCQETVVLAEKNSSASETTEWSGRL WRTYLICKTYFLSGKLEDALELLNKHQQVTNVKESEGRTSQECFSSLSTTIRELLSHK AAGNEAFQARRYSEAVEQYSAALARNSDSRPFSAVCFCNRAASYQALGQVTDAIADCS LAMVLDATYLKAISRRATLYEMIRDYGQAANDLRKLISLIEKQANNSGLSPKVLNKHS DLKQARTRLLSVEDEAKRDTPLNLYLILGIEPSSSPADIKKAYRKAALRHHPDKAAQL LVRNEKPDDGFWRDVAKEVHADADHLFKAIGEAYNVLSDSDKRQEYDIEENLRNATKR VSKGGRMHRSPEQRYTKQYDRGFNPRPSVFLVLSFGEGGSWSCKDWLVGMISFDTSDV VA</aaseq>

Gene Sequence

<dnaseqindica>38..67#181..386#485..554#1025..1231#1381..1604#2121..2199#2272..2409#2958..3085#3292..3394#caatgcattgcacataagttcacactcagataaactaatggagatgaaagcagaggcgctactgacggtctgtaatttcttctcgttcgctgttttatatccatgttttttttgtgaactattacactattgtatgtcttagtgcttcctgcttactaatatggttgttgcactgtacagctacggaaatatgaagaagtcattcaactatgccaggaaacagttgtgttagctgaaaagaattccagtgcatctgaaactacggaatggtcagggaggctctggcggacatatctcatttgcaagacttacttcctttcaggcaaacttgaagatgctctcgagttgctaaataagcaccagcaagtgacaaatgtcaaagagaggtaaatttctcatgtcctatgagttgcatttctttcttttttttcctttgtaagtttttcttgttatatttaactcctgaatggggctactcttgcagtgaagggagaacatctcaggaatgtttctcatctttgtctactaccattagggaacttctttcccataaggtatgctccatttgtttaacatattttgcgggaaatgaactttgatgatatttgtcctgtcatatctacctatgttctttattgagtctgttctaatatttaaatttgctctgtccagaactataattgcttttcccttctggttttaaggaatatgatatttctcagcaggaaatgttgcataatttttgaagtgacagtactttgctgtctatcatatcgatacatgatttctttcttgcagtcagaactgcattttttattcaactttagcaacttctactgttttactgagtaggatgtgcaagaaataaacaacttattgactcccaggataattagtaactatgagtgcatctctatttcctatgtttgacgcaacatcacagaatgagcaagaaaccgattagatagcctttcatttttgttaatgataacttaatattttttgtgctcatgttgctttttaggctgctgggaatgaagcatttcaagctcgtcgatactcagaggctgtagaacaatattcagcagcattggcacgtaatagtgattcacgccccttttcagctgtctgtttttgcaatcgtgctgcttcataccaagcactcggtcaagttactgatgctatagcagattgttcactagccatggttcttgatgcaacttatctgaaggtaaagtgcagtagctcttgttttatgatacacagttatcattttgcacacatttacatatgcataatatgtgatacatttattatatatggactgttttagccttatgtggttgtgcatggatttcattaatggcttcttaatttcaggcaatttcaagaagagccaccttatacgaaatgatcagggattatggacaagctgctaatgatttacggaagctcatatcacttattgaaaagcaagctaataactctggattgtcaccaaaagttttgaacaagcatagcgatctgaagcaggcgcgcacccgacttttatctgtagaggatgaagcaaaaagagatactcccttgaatttgtatttaatcttgtaagttttttctaaattaaccttaccttctttttgtttattaaagtgttgtttttgcccccaggtttttaaccaaccttaatatttgctttcaatgcatatctctgacatttgattttttacctactgttctcattgatctagtggaacaaattaatctagaatctataatgtagtgattcctttttccccttgccaagagcactgctgcatgtgttggattagattttctcgatagcacaagacagctgttttataggagaatcaatactttgctacttcatctagccacagtcacacacatgatttaggacatcaactccattgtgatgagtacagctgctcatgtcatattatgttgcatacttgtatgatcttattttaattgggtgtcaccctttctaactattggcgaatcatctatattttaatgagacgaagcaaattaataatctcttattatgtggagatagcttaattagttgtttctcttctctcctgccccctcttttgcaggggaattgaaccatcttcatctccagcagatattaagaaggcataccggaaggctgcactgaggcatcacccagataaggtttacattgtttcagagaatttcttgttggattcacacagaaagcatctgtaacactattttgacctgcaggctgcacaattgctagtaaggaatgaaaagcctgatgatgggttttggagggatgtcgccaaggaggttcatgcagatgctgaccatctatttaaagcaattggggaggcttataatgttctttcagactctgacaaggtaaagcaaaaaaacaattaaatatgcttatgaaaagtggtaaccgagtaatattttcatgcgccactcatcgtagattttttcaatggatcaaatctcgaccaattcattattttcatacctggaagtttccaagatagcattggtaacatatttgcaaaatttaagcctcaactaaacattctgcaaggatgcttttaggtcgccagatactttgtgagaatatagctctgttactctatatcttcccttttctttttggttgatccaccatctagatgcgtggatgctgtaatctttactgctcctgcacattctctctaaataataataataatgggcaatgccactatgagcagactctgggtacatactagtaatggagaagcctatacctaccatattttggaaaatttggatgtgcttgctacaatgctacagtgcttattgatggcagaaatatgaagtttcattttgttataaaatgaccattgtttttttaatttaaatttcctgcaaaacaaagttcacctgatttccttttgcagcgccaagaatatgatatcgaagagaatttaagaaatgctacaaaaagagtctccaagggagggaggatgcacaggtcccctgaacagcggtacaccaaacagtatgataggggttttaaccctcgtccgtggcagtcaaatagatcaagtggatcccgctcacggtggtctggatacgatgatgattactggtgaaggcctccttgcaccatggtgcccaccatttgttctctctggagtgctaggtgctgcccctgaagtcctggtgcgctaacttggccatcctcattacacaagggatgtgccgcatgcgacagcttttttgactgtccagcagcgtcttcttggtcctttcgtttggagagggtggatcatggagctgcaaggattggttggttgggatgatcagttttgacacttcggatgttgtagcttgaacagcagacaatgcattgtttgggagtgggacatcaaccaatcttggttgacatgatatggtctcgagcctgcctgaacactaacaccaacatcaaatgctaacatgaaggatataaatgtcaggctccctatacgtggaaggatatagttttgtccggtgcaagatatattctttgaagatagtaggacgaaagacactgtcgcgtgtgccgaggttgagggttttgttttcttgttgaccggcaatttggatgatgtaccatatgctgagtgcctctcaatgggcaacaaagaaaacatgatgtataagtttatgcagattgcctgttgttgaatgcgtttttgttcttcgct</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0374600, RefSeq:Os05g0374600