Difference between revisions of "Os09g0542100"
(Created page with "{{JaponicaGene|
GeneName = Os09g0542100|
Description = Peptidase A1, pepsin family protein|
Version = NM_001070354.1 GI:115480450 GeneID:4347737|
Length = 3686 bp|
Defini...") |
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| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{JaponicaGene| | {{JaponicaGene| | ||
GeneName = Os09g0542100| | GeneName = Os09g0542100| | ||
Revision as of 21:03, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os09g0542100 |
|---|---|
| Description |
Peptidase A1, pepsin family protein |
| Version |
NM_001070354.1 GI:115480450 GeneID:4347737 |
| Length |
3686 bp |
| Definition |
Oryza sativa Japonica Group Os09g0542100, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 9:22178906..22182591 |
| Sequence Coding Region |
22179247..22179464,22179556..22179627,22180253..22180310,22180397..22180496,22180579..22180652 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008402:22178906..22182591 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008402:22178906..22182591 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>ctttttcttctctctgcgtttgctttgctttgcttcgttgcgagctatggttggtggtggtggtggtgtggtggttgttcgggctgtgctgctgctgctcgccgccgtggccgcggcggaggcgctgagcctggacgtccaccaccggtactcggcggcggtgcgccggtgggcggccgccgccgcgccgccacacgggaccgcctcaacgatttcggatttttgcattacgcggtggtggcgctggggacgccgaacgtgacgttcttggtggcgctcgacaccggcagcgacctcttctgggtgccatgcgactgcctcaagtgtgctcctttccaatcccccaactacggaagcttgaagttcgacgtgtatagccctgcgcaatcgactactagccggaaggtcccgtgcagtagcaacttgtgtgatctccaaaatgcctgccgttctaagagtaacagctgcccctacagtatccagtacttgtcggataacacctcatcctctggggtattagtggaggatgtcttgtacttgacatctgactccgcgcaatcgaaaatcgttacagctccgataatgttcggctgtggacaggttcagacaggatcgtttctaggcagtgctgcgccaaacggtctgcttgggcttgggatggacagcaaatcggttcctagcttgctagcaagcaaaggacttgctgctaattctttctccatgtgctttggcgatgacggtcatggtaggatcaattttggggacacaggaagctcggatcagaaggaaactccattgaatgtttataaacagaatccatattacaacataactatcacgggaattacggtgggaagtaaatcgatcagcacagagttcagtgctattgttgactctggcacgtctttcacggctctgtctgatccaatgtatactcaaatcactagcagttttgatgcacaaatccgttcgagccgaaacatgcttgactcttccatgccgtttgaattttgctactcagtaagtgccaacggaattgttcatccaaatgtaagtctgacagcaaaaggtggaagcatatttcctgttaacgatccaataattaccataacggacaatgcttttaatccagttgggtactgcttggctattatgaagagtgagggtgttaacttaataggagagaatttcatgtctggactgaaggtcgtctttgaccgagagagaatggtgttgggctggaaaaacttcaactgctacaacttcgacgaatcgagcagacttccggtgaaccccagcccttcagctgttccttcgaaacccggtcttggtccgagtagctacacccctgaagcagccaaaggagctttgccaaacggcacccaggtcaatgtgatgccttcagcaagctcaccgctgcaaccgcagagcgtttccgccaccattgttctcctattcctcatcgttctctga</cdnaseq> |
| Protein Sequence |
<aaseq>LFLLSAFALLCFVASYGWWWWWCGGCSGCAAAARRRGRGGGAEP GRPPPVLGGGAPVGGRRRAATRDRLNDFGFLHYAVVALGTPNVTFLVALDTGSDLFWV PCDCLKCAPFQSPNYGSLKFDVYSPAQSTTSRKVPCSSNLCDLQNACRSKSNSCPYSI QYLSDNTSSSGVLVEDVLYLTSDSAQSKIVTAPIMFGCGQVQTGSFLGSAAPNGLLGL GMDSKSVPSLLASKGLAANSFSMCFGDDGHGRINFGDTGSSDQKETPLNVYKQNPYYN ITITGITVGSKSISTEFSAIVDSGTSFTALSDPMYTQITSSFDAQIRSSRNMLDSSMP FEFCYSVSANGIVHPNVSLTAKGGSIFPVNDPIITITDNAFNPVGYCLAIMKSEGVNL IGENFMSGLKVVFDRERMVLGWKNFNCYNFDESSRLPVNPSPSAVPSKPGLGPSSYTP EAAKGALPNGTQVNVMPSASSPLQPQSVSATIVLLFLIVL</aaseq> |
| Gene Sequence |
<dnaseqindica>3128..3345#2965..3036#2282..2339#2096..2195#1940..2013#1721..1856#1420..1644#1111..1346#476..608#343..362#27..227#ttctctccgtataaagttgatactagctttttcttctctctgcgtttgctttgctttgcttcgttgcgagctatggttggtggtggtggtggtgtggtggttgttcgggctgtgctgctgctgctcgccgccgtggccgcggcggaggcgctgagcctggacgtccaccaccggtactcggcggcggtgcgccggtgggcggccgccgccgcgccgccacacgggacggccgagtactacgccgcgcttgccggccacgacggcctgcgccgccggtcgctcggcgtcggcggcggcggcggcggcgccgagttcgccttcgccgacggcaacgacacctaccgcctcaacgatttcggattgtaagctcgcctcggattgaatctttgaattatctggtttttttctcttgtttatggtggattgaagaaggcaaagtggtggttgttgcgggtgtcccgggttggttgcgcagtttgcattacgcggtggtggcgctggggacgccgaacgtgacgttcttggtggcgctcgacaccggcagcgacctcttctgggtgccatgcgactgcctcaagtgtgctcctttccaatcccccaactacggagtaatctcctccctcttcttctttttcctctagtttttgttgcaattggtttcaaaagtttgttgttctgttagatattttaggttgttaggataactggataagtagtagtctagtagagaagagaatttcactttagggattggggaaagttgttgtgaatggcataataatagatttgttgctaaacaaagatgaaagtggtactagtagactactagactggtagaaaagattacgacaggattatgagcatgtctataaagaggagaaaatcatgaaggcactgcatgtgcttgtgtgcttcttggaagcctttctattagcatgacagcttgaactgggacctcgttcagcttaaagaaaatagccgaatcttgtattcttccgtgcactcttgtcagaattttgaaatttactcttgcttatgggaagctgctgaatcatgatgaccttactgagtaatctatttacatttgctgcacatgacaaatttatacagagcttgaagttcgacgtgtatagccctgcgcaatcgactactagccggaaggtcccgtgcagtagcaacttgtgtgatctccaaaatgcctgccgttctaagagtaacagctgcccctacagtatccagtacttgtcggataacacctcatcctctggggtattagtggaggatgtcttgtacttgacatctgactccgcgcaatcgaaaatcgttacagctccgataatgttcgggtatgtactatatgatccaccacatgcttatgatcgcagtgttgttgtgctgaattttgtgtaaaatgttcagctgtggacaggttcagacaggatcgtttctaggcagtgctgcgccaaacggtctgcttgggcttgggatggacagcaaatcggttcctagcttgctagcaagcaaaggacttgctgctaattctttctccatgtgctttggcgatgacggtcatggtaggatcaattttggggacacaggaagctcggatcagaaggaaactccattgaatgtttataaacagaagtacgttttgtcagaacaatatttcaggaacaataaatctactgtaacttaacgttggtgtactctctttttgcagtccatattacaacataactatcacgggaattacggtgggaagtaaatcgatcagcacagagttcagtgctattgttgactctggcacgtctttcacggctctgtctgatccaatgtatactcaaatcactagcagtgtaagtagcgtaaccatattagcagacaattgaccatgctagatatttgatggtcattcttatatttctcccttcttattcagtttgatgcacaaatccgttcgagccgaaacatgcttgactcttccatgccgtttgaattttgctactcagtaaggtaagttttgtaggagcaatccctgatagaatgcagattggcactatgctttaactcatctctgtgtttctgcactttccagtgccaacggaattgttcatccaaatgtaagtctgacagcaaaaggtggaagcatatttcctgttaacgatccaataattaccataacggacaatgcttttgtaagaaatccttgatactcagcactttctttaagccatgttaagtgagcttgtttatttatctttgctgcttttgcttgtggcagaatccagttgggtactgcttggctattatgaagagtgagggtgttaacttaataggaggtaagctcctgtactttcacactctttagctatttaaagatgcctggttctctgataatatttcaagttgctatgctttagttttactggatgctgtgtagaccaaatagtagttctgtctgtagtgtacaagtgggacactcctctagttcatctctattcttcatctgtagttggtattagatgagttatgtaatatgaggtatacggtgttgtttgaatctatcatattcatttttcggacttgcctcgctagcctattgttgatgcaaaaaaatgccaaatttccctgttaacacctatacaactatacattgggttttggtctcaacatttatcaaattcctgtctgctaccttttgttatatatatatatatatatatatatatatatatatatatatatatatatatatatagtaaatttgtttggtgctccatggtgcctaaagaaaattccagctattgccttgatgttcaaattccccttttctttatgatgtactactaaattaatatacattatttgggtcaacaaatgttttcttttaaattcttcacaatatgataaacgacaataatcaatatcactgatttttactctctcccgttactttgggtgcagagaatttcatgtctggactgaaggtcgtctttgaccgagagagaatggtgttgggctggaaaaacttcaactgtaagtacctccatattcctcaaaactattcttcagtttcaactcataccttagctagaacaatgccctgaaaaattgtgtctgtcatcaggctacaacttcgacgaatcgagcagacttccggtgaaccccagcccttcagctgttccttcgaaacccggtcttggtccgagtagctacacccctgaagcagccaaaggagctttgccaaacggcacccaggtcaatgtgatgccttcagcaagctcaccgctgcaaccgcagagcgtttccgccaccattgttctcctattcctcatcgttctctgaattctgaattctgatcagctcagctccagccaccatagcttcagagctccattatcctgtattgatgatttgattacacataggatcacattctttttcttccttgtttttgtagttgctgtagggctataggagttgtagagttgtagagaggatagatcacactcacaagaatcgtcatagagaggccatttttcagttgattttttttacgtgttcatatgtataaacctcataataatgcattccactgagggtttgtttcaggtggattgatgcacatgtatacaggattttgatgtattgactcaatagattaatgatgatactggcctatatat</dnaseqindica> |
| External Link(s) |
