Difference between revisions of "Os05g0400700"

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(Created page with "{{JaponicaGene| GeneName = Os05g0400700| Description = Similar to DNA-directed RNA polymerase II 19 kDa polypeptide (EC 2.7.7.6) (RNA polymerase II subunit 5)| Version = NM...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os05g0400700|
 
GeneName = Os05g0400700|

Revision as of 20:09, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os05g0400700

Description

Similar to DNA-directed RNA polymerase II 19 kDa polypeptide (EC 2.7.7.6) (RNA polymerase II subunit 5)

Version

NM_001062018.1 GI:115463766 GeneID:4338726

Length

2200 bp

Definition

Oryza sativa Japonica Group Os05g0400700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:19495198..19497397

Sequence Coding Region

19495476..19495541,19496019..19496087,19496413..19496478,19496793..19496843,19496950..19497115
,19497206..19497321

Expression

GEO Profiles:Os05g0400700

Genome Context

<gbrowseImage1> name=NC_008398:19495198..19497397 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:19495198..19497397 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgttcttccacatcgtgctggagcggaacatgcagctgcacccgcggcacttcggcccgcacctccgcgacaagctcgtctccaagctcatcaaggacgtcgagggcacctgcagcgggcggcatgggttcgtggtggcgatcacgggggtggaggatgtcggcaaggggctcatcagggagggcacgggctacgtcaccttcccggtcaagtaccagtgcgtcgtcttccgccccttcaagggcgagatcctggaggccgtcgtcaccatggtcaacaagatggggttcttcgcggaggctgggcctgtgcagatcttcgtgtccaaccatttgattcctgatgatatggagttccaatctggggatgtgccaaattatactacttctgatggatcggtgaaaattcagaaagatagtgaggttcggttgaagattattgggacacgtgttgatgcaacagaaattttttgcattggcacaataaaagatgacttcctgggcgttatcagtgatcctggtgcggcagtgtaa</cdnaseq>

Protein Sequence

<aaseq>MFFHIVLERNMQLHPRHFGPHLRDKLVSKLIKDVEGTCSGRHGF VVAITGVEDVGKGLIREGTGYVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAG PVQIFVSNHLIPDDMEFQSGDVPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIG TIKDDFLGVISDPGAAV</aaseq>

Gene Sequence

<dnaseqindica>1857..1922#1311..1379#920..985#555..605#283..448#77..192#ccagttgagtcgaactgttgaggaatcgctcgctcgctcgctcgctcgccggcggcgcggacgaggagggggcgagatgttcttccacatcgtgctggagcggaacatgcagctgcacccgcggcacttcggcccgcacctccgcgacaagctcgtctccaagctcatcaaggacgtcgagggcacctgcaggtagggctcgggattggttgggcaaaccctagtagggcggggaggggatgtggggttcgacgggattcattcttgttcgtccttttgcagcgggcggcatgggttcgtggtggcgatcacgggggtggaggatgtcggcaaggggctcatcagggagggcacgggctacgtcaccttcccggtcaagtaccagtgcgtcgtcttccgccccttcaagggcgagatcctggaggccgtcgtcaccatggtcaacaaggtgggcgatgtgcctccgtccctcgccggattggtatttggtgttgggtggattagggcttgtttgtggttagtggctccaattcgttttcgtgttggttctgcagatggggttcttcgcggaggctgggcctgtgcagatcttcgtgtccaaccatgtgagtgcctgcattgcttggagctgcttttttctaatgctccaaatttgtggagtaaaagaatcagaatttatgctagaatgatcgatagacgataatggttcagtaccattttcatacacccagtttagctgtaccatcaactcgaaggatggtttttgtcatagaaatttctgatactaatttatcaaacatgttggtttgaacaatcttaaagtgactggaaggcaacataaggttctagttgaatttgtgctttctaaccaactaatgttttgttcttgcattttcccgtttctatttttgttgtgcagttgattcctgatgatatggagttccaatctggggatgtgccaaattatactacttctgatggatcggtatgcttcttttctacagttacttcttatgtcttgtcctctataaacattgacaactgttgacaggttatgattttttttcctgtttatttatgcttattggtgatatgtctgacttaaaaagaaatgctggggaatgtaatgtaatgtccattgtatccaattttggtatcagcatgtcataactatgcttgaaatgcatacacatatatgttcattgtttttcctagaaacgaatagatgtgaatactgtactactgttgaaggctaattgctttggccatcttcttttgcttactaggatttacttgtttgtccgatgcaggtgaaaattcagaaagatagtgaggttcggttgaagattattgggacacgtgttgatgcaacagaaattgtaagtttgttgacatctagtttcgtgcaaaaaaacaaacgaaaaaccaggtgttccctgtcttttagatttttgtagcattgctctcagagtaaccaccatatgcaattattggtgatgtaacccacttttccataccagtagtttgcatgatgtttttctttcctaatgtgtgaaaaagaacagatgtggttttatcagcaaagatcaaccttgatgtgtgtcaagtaaattagttgaaaagtatatcaaaatgaaaatttgacatgtaatcttgtagcaacaaattgcaagtaattaccatgaatgctcataagctagccactagtatggtatcataatagataattgttgaatgcatgtggctatattcttccctgaggcatttctgaatccatgttcttgctgtcataactcataaccccgtttaagctggtgatgtgcaatgctctaacagtttgaatatgtttgttgcagttttgcattggcacaataaaagatgacttcctgggcgttatcagtgatcctggtgcggcagtgtaaattatccggtgacaagattacgcctcttcatgctcttgaacgggaatattccgatgaattgtagtgttaaaatatggaagccccactggaaggggctgtaagtgggttggaacctgtattttcatcactataaatggcgctttaccaagttggcactgttgcttgagtgtgttgtgggattcaactttcaagcagtcatttaactaatcaaactctgacctttttacggactgtacaattttgcactgtatccttgcaattaaacattcaatgcttcg</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0400700, RefSeq:Os05g0400700