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| Line 20: |
Line 20: |
| | | | |
| | ==Structured Information== | | ==Structured Information== |
| − | {{JaponicaGene|
| + | [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 7]] |
| − | GeneName = Os07g0545500|
| |
| − | Description = Similar to VMP4 protein|
| |
| − | Version = NM_001066451.1 GI:115472634 GeneID:4343520|
| |
| − | Length = 5926 bp|
| |
| − | Definition = Oryza sativa Japonica Group Os07g0545500, complete gene.|
| |
| − | Source = Oryza sativa Japonica Group
| |
| − | | |
| − | ORGANISM Oryza sativa Japonica Group
| |
| − | Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
| |
| − | Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
| |
| − | clade; Ehrhartoideae; Oryzeae; Oryza.
| |
| − | |
| |
| − | Chromosome = [[:category:Japonica Chromosome 7|Chromosome 7]]|
| |
| − | AP = Chromosome 7:22254956..22260881|
| |
| − | CDS = 22255038..22255880,22256163..22256398,22256914..22257110,22257196..22257910,22257987..22258629<br>,22259707..22259862|
| |
| − | GCID = <gbrowseImage1>
| |
| − | name=NC_008400:22254956..22260881
| |
| − | source=RiceChromosome07
| |
| − | preset=GeneLocation
| |
| − | </gbrowseImage1>|
| |
| − | GSID = <gbrowseImage2>
| |
| − | name=NC_008400:22254956..22260881
| |
| − | source=RiceChromosome07
| |
| − | preset=GeneLocation
| |
| − | </gbrowseImage2>|
| |
| − | CDNA = <cdnaseq>atgatgaggcattgtaggagagaatggctcctcgccctgtgcctcatctctgtgcagctcctcattccaacaggctgcgagggggttctcgtcgcggcaagcaacatgtcgccacctgctttgacaccactcctcatcaatcaagtagaccaattggtagaacatgcatgggtcaagtgtggattggacaagagaactcttgaagatgttagacgccacttcaactacaaccatgtattggcaattctccgtagaatgtctgggcaagacattaaggacacctctcctgacattgatggagggaccagtgtattatcactagaaaggagggacgctatactgaactgtttaagcaagcagaatttcatgagtatcgctggacaggatggtttaaaaatcttgtccgctgattatatcaaagcacttattgcctcacttagaacagaccttgctcaggaatcttcaactacaaagtcaatacctgaacaagcaggaaaacctgtcccagggaaaacttctacaccaaaacctgtaaacaaaccaaccgacagtgtatcatctccaccagatcgttcatataaatcagctcctacagaaaaggaaaaccctcctactaaatcagtagcggaaaagaaaaaggacagcagtggcatgccaaatgctttcattggtttgtccattgctggcatagctcttatggctcatctctgtttgtgctgcttcatgtgccatgggacttcctcatctgacttgagggatgataaaccacttctgactctaaatccgagcaacttgtccgctgcttctaaatcgtcccaaggaaatccaattgatgtcaataagcttggggtagtgtcgttgaaatcagaggctggtcaaaatggagatgtgaaactaatttcgaaggaaggcacaaacaatgtgaatgtggtgcacccagtgagttctgtgtcagaatcaacattgatgccacctccggaaggcgcaaacaacgtgaatatggtgcacccggaaggcgcaaacaacatgaatgtggtgcacccggaaggcgcaaacaacgtgaatatggtgcacccggaaggcgcaaacaacgtgaatgtgaatatggtgcacccagtgggttctctgtcagaatcaacaccgatgcagcctcctgtgatgccacctccaattccgaagcttctttctccaccagcaccccaagctcccatgccaccattaaaggcttctcctgttcctcccccagaaccttcaccacctcctgctccaaaagctgcacctccaccgccaccaccaaaatctactggccctggcccacctcgcccgccaccgccagccatgcctggttcttcgaaaacacgcccaccgccacctcttaagccaggcgctaaggtgggtgctgttgaaaattctaatgaagctaaaacaaagctcaaaccattcttttgggataaagtaactgccaatcctgcacgatcgatggtgtgggaccaccttaaatcaggatcattccagtttaatgagcagttgatggaaaacctttttggttataattcaactgacaagagcagtgacaccaagaaagatttatcatcgaaagatgccactcaactcataaggatacttgaccccaaaaaggcgcagaacctagctatatcattgagggcgcttggtgtttcacctcaggaagtatgtagtgcagttaaggaaggaagtgaacttccatctgatttgatacagaccttaataagatggtccccaagtaatgatgaggagctcaggcttcgattatacagtggggaactctttcaacttggtcctgcagagcaattcttaagagtaatcatagatattccttatattttccagcgcttagatgcattgcttttcatggccaatttaccagaagaagcttcaaatgtgaagcaatcctttgccactttggaggtggcttgccaggagcttagaaacagccgtctttttatgaagttactagaagctgtcctcaaaaccggaaatcggatgaatgttggcactttccgtggtggagctcaggcttttagactcgacacgctcctcaagttgtctgatgtcaaaggaactgacggaaagacaacactattgcattttgttgttcaggaaatcattcgttccgaaggtgtccgtgctgaacgggctgcaaaggagcagaacagtggcgtttccagtgtgaagactgatgatctaggtgacaaaagtgagcaaactgaagacggttacaaacaactggggctgaaagttatctccagcttaggagatgaacttcaagatgttagaaaggcagctatcctagacgcggatcaattgactatgtcggtagcaagtcttggccacaagctcatgaaaaccaatgaattcttgaacatggacatgaaaagtttggacgaagacagtgggtttcaccgcaagcttacgcacttcgtacagcagtctcagactgatattactttcttgctggaggaagagaagaaaatgcggttattggttaaagacaccgtcgactatttccatggaagtgcaggaaaggatgagggcctccggttatttgtgatagtaagagatttccttgcaatgctggacaaggtgtgcaaggaggtgaaggaagcatcaaaagttgctccagtaaaagcaaaagccaaacagccctcccaatcattgcagtcattccgtgatccacgggttaatctttttccggcgattcaacacctgagggcagatagctctagctcaagttctgatgatgaaagttag</cdnaseq>|
| |
| − | AA = <aaseq>MMRHCRREWLLALCLISVQLLIPTGCEGVLVAASNMSPPALTPL LINQVDQLVEHAWVKCGLDKRTLEDVRRHFNYNHVLAILRRMSGQDIKDTSPDIDGGT SVLSLERRDAILNCLSKQNFMSIAGQDGLKILSADYIKALIASLRTDLAQESSTTKSI PEQAGKPVPGKTSTPKPVNKPTDSVSSPPDRSYKSAPTEKENPPTKSVAEKKKDSSGM PNAFIGLSIAGIALMAHLCLCCFMCHGTSSSDLRDDKPLLTLNPSNLSAASKSSQGNP IDVNKLGVVSLKSEAGQNGDVKLISKEGTNNVNVVHPVSSVSESTLMPPPEGANNVNM VHPEGANNMNVVHPEGANNVNMVHPEGANNVNVNMVHPVGSLSESTPMQPPVMPPPIP KLLSPPAPQAPMPPLKASPVPPPEPSPPPAPKAAPPPPPPKSTGPGPPRPPPPAMPGS SKTRPPPPLKPGAKVGAVENSNEAKTKLKPFFWDKVTANPARSMVWDHLKSGSFQFNE QLMENLFGYNSTDKSSDTKKDLSSKDATQLIRILDPKKAQNLAISLRALGVSPQEVCS AVKEGSELPSDLIQTLIRWSPSNDEELRLRLYSGELFQLGPAEQFLRVIIDIPYIFQR LDALLFMANLPEEASNVKQSFATLEVACQELRNSRLFMKLLEAVLKTGNRMNVGTFRG GAQAFRLDTLLKLSDVKGTDGKTTLLHFVVQEIIRSEGVRAERAAKEQNSGVSSVKTD DLGDKSEQTEDGYKQLGLKVISSLGDELQDVRKAAILDADQLTMSVASLGHKLMKTNE FLNMDMKSLDEDSGFHRKLTHFVQQSQTDITFLLEEEKKMRLLVKDTVDYFHGSAGKD EGLRLFVIVRDFLAMLDKVCKEVKEASKVAPVKAKAKQPSQSLQSFRDPRVNLFPAIQ HLRADSSSSSSDDES</aaseq>|
| |
| − | DNA = <dnaseqindica>5002..5844#4484..4719#3772..3968#2972..3686#2253..2895#1020..1175#gagttcactctcaccgaggccgccgccgccgccgccgagccatggaacccggggtgggggggtgggggggtggcgcagctggtacgagagggagaggtggacgacggtggcggccggccttgatccggccggtggcagcgggaaaggggggagccggggaggtggcggcgtgctagatatggaaacacttcggagatggcgatggccgtcgaggcgcgcggattcagggtgggggtggtcgagctcaccggcggcaagggactcgccgggtggtcgaggtctccgatcatccgacgcggagagttgcttgggttttctgtttctccatggttggtaaataatagcaattccatcctggaattctcctcctcccattcccgagtttccgacgagacgctttggcaatggcggtggcgccagatcacgcgcccgtattcgtggcgctgccgccgcggattccgcgggatggacatggggaggaatttcccgggcttggacttgcctgtccttctcttttcctcccttgttcttggggtggggttggcggattggggaatcggcttcgagctgattggttttgactgcgccatccgatttcttcgcttttgtggaggggggcagcacggctgtgcatttcgttctcttgtcgtggatgcccccggaatttatccccaattctcgctatacttgctcgtctacatcggtgtgtttcttggagcatttcaagcacttctcgtcttcatcgatgcatttcttggagcatttcaagtgtccagcgtctaaatcgctcaggcgaatttggaggagcctttaggcgcattccgctcaaaatcaagtggaattgttgcatgaatcttcagattgttttggctggattgccaggtttcttcgatcatttttctctacggggctgaggaatttttcgccccatgcccggaaagctccaaaggggatgtttgccacaattttcagagtatctgtgttgagatgatcggtgtggtgtagaaggaagcacgcaaatgatgaggcattgtaggagagaatggctcctcgccctgtgcctcatctctgtgcagctcctcattccaacaggctgcgagggggttctcgtcgcggcaagcaacatgtcgccacctgctttgacaccactcctcatcaatcaagtagaccaattggtaagcacatttccatatattttgatgcatacgtaagcttcaatttgtgtgaaaataccatacaagagatggcagtagcagcttttgtaaggagatgtaggcatagtcgtgtttgcattcagtttcgaaccaagaattaggaccaagtcctttccaagtggatgtgggttgcaagacattaatcgggactcgggagtatgctctcaggagcacagaagcccatggcattccctcctatacttattacggtgtgtgtcgctaggcattaaacgggaatttgctctcaagagcacagaaacacatggcattcacctcctaacggcactgatgtttttgggtaatgcaggactcagggaatcaggattgattcatgaataggtccacatttacttatttgttgtgggacatgcagagtattcttgtactcttgtagtctcgtgtttcccaaattgcatgaaagacagacgaataaggttgctgaagtctgtaggtgattcccaaaggcaaccatgattttatttgtgttgtgtcttatagttttttttttttttttttttggctttggatgacagatcacataaggttaacctttctgtgaacagagttttgaatcattttcttcttgtgttttatggctgaggtagtctgtttgtttttttagaaaatggcagcctctacatccaaaccagtctgataggtgtgcaccattgcattgattgtgatggtgttgtgatttaaacactggcttaacagaatcaaactgttaaatttggcttgcctccttctctcccctccccctcctggcctcctctctcctttaacagcaggtgctagattcctccttgttatgacatgacaaatgaagactcggagagaggaatgtgactagtagtgaatataattattttcgatccaactagtagaacctaacattttgtggcatcaatggctgtttaattcctaactggtgaatgttgccttttgttggatatgactacaaatgttgggtatatccttttttttaaaagaaaaaacattcgtactgattagagtgactgttaattacatttcatacaggtagaacatgcatgggtcaagtgtggattggacaagagaactcttgaagatgttagacgccacttcaactacaaccatgtattggcaattctccgtagaatgtctgggcaagacattaaggacacctctcctgacattgatggagggaccagtgtattatcactagaaaggagggacgctatactgaactgtttaagcaagcagaatttcatgagtatcgctggacaggatggtttaaaaatcttgtccgctgattatatcaaagcacttattgcctcacttagaacagaccttgctcaggaatcttcaactacaaagtcaatacctgaacaagcaggaaaacctgtcccagggaaaacttctacaccaaaacctgtaaacaaaccaaccgacagtgtatcatctccaccagatcgttcatataaatcagctcctacagaaaaggaaaaccctcctactaaatcagtagcggaaaagaaaaaggacagcagtggcatgccaaatgctttcattggtttgtccattgctggcatagctcttatggctcatctctgtttgtgctgcttcatgtgccatgggacttcctcatctgacttgagggatgataaaccacttctgactctaaatccgagcaacttgtccggtataaaatcgcccactctgctgcaagataatgtaataatttcatctagtggtggtatttactctctcttttgcagctgcttctaaatcgtcccaaggaaatccaattgatgtcaataagcttggggtagtgtcgttgaaatcagaggctggtcaaaatggagatgtgaaactaatttcgaaggaaggcacaaacaatgtgaatgtggtgcacccagtgagttctgtgtcagaatcaacattgatgccacctccggaaggcgcaaacaacgtgaatatggtgcacccggaaggcgcaaacaacatgaatgtggtgcacccggaaggcgcaaacaacgtgaatatggtgcacccggaaggcgcaaacaacgtgaatgtgaatatggtgcacccagtgggttctctgtcagaatcaacaccgatgcagcctcctgtgatgccacctccaattccgaagcttctttctccaccagcaccccaagctcccatgccaccattaaaggcttctcctgttcctcccccagaaccttcaccacctcctgctccaaaagctgcacctccaccgccaccaccaaaatctactggccctggcccacctcgcccgccaccgccagccatgcctggttcttcgaaaacacgcccaccgccacctcttaagccaggcgctaaggtgggtgctgttgaaaattctaatgaagctaaaacaaagctcaaaccattcttttgggataaagtaactgccaatcctgcacgatcgatggtgtgggaccaccttaaatcaggatcattccagtaagtcttcagattaaattgaagctgtgcctgaacttactattgcaagaacacactagtttaaagtatctgaactgtttcacaggtttaatgagcagttgatggaaaacctttttggttataattcaactgacaagagcagtgacaccaagaaagatttatcatcgaaagatgccactcaactcataaggatacttgaccccaaaaaggcgcagaacctagctatatcattgagggcgcttggtgtttcacctcaggaagtatgtagtgcagttaaggaaggtaaagttcatcctgtatggaactcgtcttttttattcttagcacacactcacagtgctttctagcttcatatttatcatacatacagtatctttgtaaaagttggagaactcagctatgatggaatgctgatgctctgaattattatcagacttctagtttactttgcttgcaataatgtatatggcatacattgtagatatgtgcctatttcaatttagttttcaaagtgacgagatgagggttgctctcttctgagctaagggtgacaagattaactttttttcaccaaagcgaattgtgcaaaagatatgataagtgaaatgattcatttcatctacttcaaccgctactattgagaaatgatttacaggattatactgcaaatagatgcatgttactagccattagaagttagattggtttctggtatacacaaatagtgcctccaaccattttgtttcaagaatttgatgttggatttcaccttaaccatttttcttgccaatttgtaggaagtgaacttccatctgatttgatacagaccttaataagatggtccccaagtaatgatgaggagctcaggcttcgattatacagtggggaactctttcaacttggtcctgcagagcaattcttaagagtaatcatagatattccttatattttccagcgcttagatgcattgcttttcatggccaatttaccagaagaagcttcaaatgtgaagcaatcctttgccactttggaggtaatgaaagattcattgtgaactctcaacttctagattatctcacattgttgtgccagttttgttcagttggcgatgtctagtattctattgatctaacatttccatgaagggttatatccaagtagttagttctgttacaataaatgcacttttactgcacagtttatgcctagcgatcggattcttaaaatatgagcctctgatcagttatgcttttaatgaattttgttccatattgattactattcttatctctgttggcatttcaatcccaatcaggtggcttgccaggagcttagaaacagccgtctttttatgaagttactagaagctgtcctcaaaaccggaaatcggatgaatgttggcactttccgtggtggagctcaggcttttagactcgacacgctcctcaagttgtctgatgtcaaaggaactgacggaaagacaacactattgcattttgttgttcaggaaatcattcgttccgaaggtgtccgtgctgaacgggctgcaaaggagcagaacagtggcgtttccagtgtgaagactgatgatctaggtgacaaaagtgagcaaactgaagacggttacaaacaactggggctgaaagttatctccagcttaggagatgaacttcaagatgttagaaaggcagctatcctagacgcggatcaattgactatgtcggtagcaagtcttggccacaagctcatgaaaaccaatgaattcttgaacatggacatgaaaagtttggacgaagacagtgggtttcaccgcaagcttacgcacttcgtacagcagtctcagactgatattactttcttgctggaggaagagaagaaaatgcggttattggttaaagacaccgtcgactatttccatggaagtgcaggaaaggatgagggcctccggttatttgtgatagtaagagatttccttgcaatgctggacaaggtgtgcaaggaggtgaaggaagcatcaaaagttgctccagtaaaagcaaaagccaaacagccctcccaatcattgcagtcattccgtgatccacgggttaatctttttccggcgattcaacacctgagggcagatagctctagctcaagttctgatgatgaaagttagatcaacatacctatgttttaccgtgcacactcagtgagaaaaattcatcaggaaatgataacgccaaaacaggttaaaactg</dnaseqindica>|
| |
| − | Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001066451.1 RefSeq:Os07g0545500]|
| |
| − | }}
| |
| − | [[Category:Genes]] | |
| − | [[Category:Japonica mRNA]]
| |
| − | [[Category:Oryza Sativa Japonica Group]] | |
| − | [[Category:Japonica Genes]] | |
| − | [[Category:Japonica Chromosome 7]]
| |
| − | [[Category:Chromosome 7]]
| |
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Annotated Information
Function
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Expression
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Structured Information
