Difference between revisions of "Os05g0409100"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os05g0409100| Description = Conserved hypothetical protein| Version = NM_001062061.1 GI:115463852 GeneID:4338770| Length = 1052 bp| Definition ...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os05g0409100|
 
GeneName = Os05g0409100|

Revision as of 20:10, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os05g0409100

Description

Conserved hypothetical protein

Version

NM_001062061.1 GI:115463852 GeneID:4338770

Length

1052 bp

Definition

Oryza sativa Japonica Group Os05g0409100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:19984172..19985223

Sequence Coding Region

19984172..19985111,19985207..19985223

Expression

GEO Profiles:Os05g0409100

Genome Context

<gbrowseImage1> name=NC_008398:19984172..19985223 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:19984172..19985223 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgccgctagcacgtccttccctagctgcgttgctcgcgctgtgcgcattcgccgcggtggagcggccgccggccggcgtcggcgccgccaacgtgccgatcacgacgtgccggtccttctgcggcaacatcacggtggactacccgttcgcgctccgggcggggtgcggccacgccgggttccgcgaactgctctactgcatcaacggcgcgctgatgctgcacctcccgtcgggctcctaccgcgtcctcgacatcgactacgcctaccgcggcctcaccctgcacgacccggccatgtccgactgccgagcgctcgaccgctcccggggcggcaggggcaacgggttcgtcgtcgagccgtggcgcgcgccgtacctggcgccggacccggacaacgtgttcctcctcctcggctgccgcgccagctcgccgctgttccagggcttccccgaccgccacctgccgtgccggaacgtctccgggatgggctgcggcgagtactacggctgccccgcgtgggacgactacggcgggcggcggccgtcgggcgccgcgtacggcgccgccgcgccgcccgagtgctgcgcggtgtcgtgggacgccatccgggcggtgaacgtgagccgcctcgagtgcgaagggtacagcagcgcgtacagcctggcgccggtgcgggcggccgggccggccgggtgggcgtacggcatccgggtgtcgtgggcgctgccggaggcgaaccgcgggttctgcggcgcgtgccgcgccacgggcggggtgtgcggccacgacggggacagccacggcgacctctgcctctgcggggactggaactccacctccaactgcgactcctccgccgacgcggcacggccaaatgccgcctccgcggcgccgcgtgccatcgtcgcgctttgcttgggtgttcttgcctcaggattttcatttctgtaa</cdnaseq>

Protein Sequence

<aaseq>MAPLARPSLAALLALCAFAAVERPPAGVGAANVPITTCRSFCGN ITVDYPFALRAGCGHAGFRELLYCINGALMLHLPSGSYRVLDIDYAYRGLTLHDPAMS DCRALDRSRGGRGNGFVVEPWRAPYLAPDPDNVFLLLGCRASSPLFQGFPDRHLPCRN VSGMGCGEYYGCPAWDDYGGRRPSGAAYGAAAPPECCAVSWDAIRAVNVSRLECEGYS SAYSLAPVRAAGPAGWAYGIRVSWALPEANRGFCGACRATGGVCGHDGDSHGDLCLCG DWNSTSNCDSSADAARPNAASAAPRAIVALCLGVLASGFSFL</aaseq>

Gene Sequence

<dnaseqindica>1..940#1036..1052#atggcgccgctagcacgtccttccctagctgcgttgctcgcgctgtgcgcattcgccgcggtggagcggccgccggccggcgtcggcgccgccaacgtgccgatcacgacgtgccggtccttctgcggcaacatcacggtggactacccgttcgcgctccgggcggggtgcggccacgccgggttccgcgaactgctctactgcatcaacggcgcgctgatgctgcacctcccgtcgggctcctaccgcgtcctcgacatcgactacgcctaccgcggcctcaccctgcacgacccggccatgtccgactgccgagcgctcgaccgctcccggggcggcaggggcaacgggttcgtcgtcgagccgtggcgcgcgccgtacctggcgccggacccggacaacgtgttcctcctcctcggctgccgcgccagctcgccgctgttccagggcttccccgaccgccacctgccgtgccggaacgtctccgggatgggctgcggcgagtactacggctgccccgcgtgggacgactacggcgggcggcggccgtcgggcgccgcgtacggcgccgccgcgccgcccgagtgctgcgcggtgtcgtgggacgccatccgggcggtgaacgtgagccgcctcgagtgcgaagggtacagcagcgcgtacagcctggcgccggtgcgggcggccgggccggccgggtgggcgtacggcatccgggtgtcgtgggcgctgccggaggcgaaccgcgggttctgcggcgcgtgccgcgccacgggcggggtgtgcggccacgacggggacagccacggcgacctctgcctctgcggggactggaactccacctccaactgcgactcctccgccgacgcggcacggccaaatgccgcctccgcggcgccgcgtgccatcgtcgcgctttgcttgggtgttcttgcctcaggtaagcatcgtgaagacatcttcttctcttttttggggtgaatcttattccttcgatcgtttgctgacatgcaagattgctgcctttttctgcaggattttcatttctgtaa</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0409100, RefSeq:Os05g0409100