Difference between revisions of "Os05g0417300"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os05g0417300| Description = Conserved hypothetical protein| Version = NM_001062097.1 GI:115463924 GeneID:4338808| Length = 3343 bp| Definition ...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os05g0417300|
 
GeneName = Os05g0417300|

Revision as of 20:10, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os05g0417300

Description

Conserved hypothetical protein

Version

NM_001062097.1 GI:115463924 GeneID:4338808

Length

3343 bp

Definition

Oryza sativa Japonica Group Os05g0417300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:20449544..20452886

Sequence Coding Region

20449715..20449780,20450165..20450257,20451175..20451388,20451612..20451688,20452123..20452233
,20452339..20452500

Expression

GEO Profiles:Os05g0417300

Genome Context

<gbrowseImage1> name=NC_008398:20449544..20452886 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:20449544..20452886 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggattcgtctcggcccaggagggatcccatcaagtcccgccgccgtcccgactggagagaggagcttaggagcaattgtctgaaaagaattaaagaggagagagtccagtttctttggaagaaaaggatcgatgggccacttcctgctagtgacatgataaaagtcgaatctgcagtcagggatattatctctgatgaattacagaaactcaaacagcatggagatggaaaagcggaggaagaagctgatatgatatgggaatatcaaggaccacagacagctaaacctgttgagactgaaagtgaagatatattacttgaaatggaaagacttctttatgaagatatgagagatgaagccattcagatagaagtggaggccctcgatgaggaagatgaatacttagctcaggcttttcttgaacatatgcagttaactgataaggaggcaaatgctaagctctggtgcccagtttgcaaacaaggggaactacgagaaacacataatctcgtatattgtaccatgtgtaagctacgcctagaccttggagaagataagattaacctggaattcttgcgagaaagattggctaatgtgcatatggatcacttggatagaggatgcaaatcagcacccaagttctgtttgcagactatgtttgagttgactgcgctctacatacaatgcgaagaatgtaacacttttgatgtcgtgatataa</cdnaseq>

Protein Sequence

<aaseq>MDSSRPRRDPIKSRRRPDWREELRSNCLKRIKEERVQFLWKKRI DGPLPASDMIKVESAVRDIISDELQKLKQHGDGKAEEEADMIWEYQGPQTAKPVETES EDILLEMERLLYEDMRDEAIQIEVEALDEEDEYLAQAFLEHMQLTDKEANAKLWCPVC KQGELRETHNLVYCTMCKLRLDLGEDKINLEFLRERLANVHMDHLDRGCKSAPKFCLQ TMFELTALYIQCEECNTFDVVI</aaseq>

Gene Sequence

<dnaseqindica>172..237#622..714#1632..1845#2069..2145#2580..2690#2796..2957#aaaataaatcctcctaccaccttcctgacgaaggcaacgcccgcacgagtcgctcaccgcgcgcgaaccttcctcggactcggggcgtctgtcccctgccgccggcgattcgatcgcgcgggcggggctgtcgcgtctcgccgccgccgccgcagctaagccagcgcggcgatggattcgtctcggcccaggagggatcccatcaagtcccgccgccgtcccgactggagagaggaggtctttctttcgttccttcccccctcccgaaccccccatctccgccgtcgccgtagcttagcgttaacgtagcgtagcgcggttctaggtcgacatgcccctgcgcgggcgagcgctagagggcgggcgtgaatgttagcgctgttggattgtccgtcgacgtgcgcgcaatgtgttcggtcgattgcctgagcgagctggtgcccccctagagttgagctaccaaaatttatcttctgctattttgttgctaatattcaccatgctaggagtaggatttatggggacattgcagtgttcggatgagttctctgttgattgttgtgtttcctttttactcgatttgtctgtaacttgtgcttactcccattttgctgcacacagcttaggagcaattgtctgaaaagaattaaagaggagagagtccagtttctttggaagaaaaggatcgatgggccacttcctgctagtgacatggtatcgaaatttattactcttttcgtcaaccttttgtacagtttcataccgtctatgcaccaatatatagtaaataatggctacattctctactgtttgttgatggaagttctcactgtagtttaatgcttttaaaggacaaacaccagataaatcagtccttctgtctgatactagtcctgaataattacagtatgtttcttcttgcagctggcaagtgaatcatgtactttaatgttacctatcattgctctcgtaatctttcttatcaatccgaggagagataccaacggcctcatcttttcgcttatgcttatgcttatcaatcaaaatttgaattttcaaccttaaatttgaagccgattttgagttttttttcatcgaagtttatttttcagcctttgcttttagatcactaaggacacgtatataaaatttttattcacaaattacttttcgtttgcaaatacgccgtttggcttattccgcagataagccaaatgatggggctgcaagttaattggttctaatttgacattcaggcttaacagcacttcattgctatggaaatgaaaatgtaaaggattcaaaatttattattgatcaactactggttgcatacaaaactaatgattgaataaccaaaatgaattgaaaaataattattggttctggacttctcgttctatgtgttcccatcatctctgtagactttacagatcgtgttgaaaaataggtaccattaagatgaccattattatggaactggatacattatcactatccttagtcgaaaaacgtggttcattaataggttataccatgagtactctgcagtcttcatgctaacatgatttgtagttgaatatatttatgtattttgtgcatctgatttatctacttatgtcgactgacagataaaagtcgaatctgcagtcagggatattatctctgatgaattacagaaactcaaacagcatggagatggaaaagcggaggaagaagctgatatgatatgggaatatcaaggaccacagacagctaaacctgttgagactgaaagtgaagatatattacttgaaatggaaagacttctttatgaagatatgagagatgaagccattcagataggtacattttcaaaatgtttttttattgctacagtgctcaagaactgttcttgcaatctgctttgttcatgttttctctggagtttttacaaatttatatctaattccttacaactcaatagataatattctctgattcatctcacatggatgctcaaaatttcattttatcttgtagatgaaaataaattggtttggttaaaaacatttcctatttattgtagaagtggaggccctcgatgaggaagatgaatacttagctcaggcttttcttgaacatatgcagttaactgataaggaggtatgcattcattgagcatttagttcaacagttcgctggtctgtaagtttttcaattatataatttgatgctgtatatttctctgacataattactctctgtgcttgactttgtcttagctcaagccattacttcttctttgaagtgcatgctagagctacatttcctatatgatctgtacctatttgtgtaattttataattgaaaatgcaaatggtttagtgttgatggtaggatctgacaagaaacacctcaattagtgtttccatggaggaacagaaaaatttcccagtcaaaacatggtattagaataggttgggttctgttgtttggtcgcaaatgcagcactgctggcgatgtcaatcatatgtattattattctttcctattgtctttccccccttccattttgaaataattgtgctatatatcaggcaaatgctaagctctggtgcccagtttgcaaacaaggggaactacgagaaacacataatctcgtatattgtaccatgtgtaagctacgcctagaccttggagaagataaggtagttcctgttggcaactttgtatgtcttcctgatacattgagatggttttactttttcataacattattgtaccaaattttacaactttaactgttcgatcagattaacctggaattcttgcgagaaagattggctaatgtgcatatggatcacttggatagaggatgcaaatcagcacccaagttctgtttgcagactatgtttgagttgactgcgctctacatacaatgcgaagaatgtaacacttttgatgtcgtgatataaatagctacaatgctgatgaagaccatattacggagagaagggaggatgtccatactttcagaagttctttctccccgtttactgttagatcaacggcgaacttatccttggaagaggatgtacatcaactaggtagggctctgtccactttttgcgttgaggtgatcaaactgtgactcttccatgtatctcttttttgtttgatgtctttcttcacgtaaaggtagagtgcagtgtaattaaccagatgagcttggtcaatattttgttgccaacttacatgaaagtcagtgaactcgctgaaccgatatggatatgggctagattatccgtatcctatgatgctgtgagttcaatatggttttatggattttcttattcctttg</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0417300, RefSeq:Os05g0417300